FC932024
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932024 vs. ExPASy Swiss-Prot
Match: RBM39_PONAB (RNA-binding protein 39 OS=Pongo abelii GN=RBM39 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 9.749e-22 Identity = 75/215 (34.88%), Postives = 104/215 (48.37%), Query Frame = 3 Query: 54 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDTETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTVAKSAXXXXXXXXXLALNAQSRALLMQKLDRTGIATSIAGSLG-VAPAVNGSAVN-----QQAISLXXXXXXXXXXXXXXXXXXXNMAAEFIGSPS------ECLLLKNMFDPAMETDPDFDLEIQGDV 662 +LYVG+LHFN+TE LR +FEPFG +E +QL +D+ETG+ KG+GF+ F+ E AK A LNG E+ GR +KV VT+ T A SA S L +L+RTGI G L +A G+ + QQA+ + A+ + S +C L NMF+P E + +D EI+ DV Sbjct: 251 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG-FELAGRPMKVGHVTER-----TDASSA---------------SSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDV 444
BLAST of FC932024 vs. ExPASy Swiss-Prot
Match: RBM39_MOUSE (RNA-binding protein 39 OS=Mus musculus GN=Rbm39 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.838e-21 Identity = 67/203 (33.00%), Postives = 95/203 (46.80%), Query Frame = 3 Query: 54 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDTETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTVAKSAXXXXXXXXXLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLXXXXXXXXXXXXXXXXXXXNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDV 662 +LYVG+LHFN+TE LR +FEPFG +E +QL +D+ETG+ KG+GF+ F+ E AK A LNG E+ GR +KV VT+ + + + L R LM +L G I + A ++GS AA ++C L NMF+P E + +D EI+ DV Sbjct: 251 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG-FELAGRPMKVGHVTERTDAS-SASSFLDSDELERTGIDLGTTGRLQLMARLAE-GTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDV 450
BLAST of FC932024 vs. ExPASy Swiss-Prot
Match: RBM39_HUMAN (RNA-binding protein 39 OS=Homo sapiens GN=RBM39 PE=1 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 4.838e-21 Identity = 67/203 (33.00%), Postives = 95/203 (46.80%), Query Frame = 3 Query: 54 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDTETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTVAKSAXXXXXXXXXLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLXXXXXXXXXXXXXXXXXXXNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDV 662 +LYVG+LHFN+TE LR +FEPFG +E +QL +D+ETG+ KG+GF+ F+ E AK A LNG E+ GR +KV VT+ + + + L R LM +L G I + A ++GS AA ++C L NMF+P E + +D EI+ DV Sbjct: 251 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG-FELAGRPMKVGHVTERTDAS-SASSFLDSDELERTGIDLGTTGRLQLMARLAE-GTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDV 450
BLAST of FC932024 vs. ExPASy Swiss-Prot
Match: RBM23_HUMAN (Probable RNA-binding protein 23 OS=Homo sapiens GN=RBM23 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15 Identity = 38/81 (46.91%), Postives = 57/81 (70.37%), Query Frame = 3 Query: 54 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDTETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHV 296 +LYVG+LHFN+TE LR +FEPFG ++ + L D++TG+ KG+GF+ F+ E A+ A LNG E+ GR ++V VT+ + Sbjct: 264 RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-FELAGRPMRVGHVTERL 343 The following BLAST results are available for this feature:
BLAST of FC932024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932024 ID=FC932024; Name=FC932024; organism=Citrus clementina; type=EST; length=673bpback to top |