FC932025
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932025 vs. ExPASy Swiss-Prot
Match: YKWC_BACSU (Uncharacterized oxidoreductase ykwC OS=Bacillus subtilis GN=ykwC PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 9.655e-33 Identity = 73/177 (41.24%), Postives = 106/177 (59.89%), Query Frame = 1 Query: 151 VGWIGTGVMGRSMCAHLLNAGYTVTVFNRTLSKAQPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHPSSGALSGLRPGGIIVDMTTXXXXXXXXXXXXXXXKNCSAIDAPVSGGDRGAKTGTLAIFAGGDESVVQKLNPLFALMGK-VNYMGGSGKGQFAELAKSITIA 678 +G+IG GVMG+SM +H+LN G+ V V+ RT KA+ +L GA D+ L+ ++DV+ ++VGYPSDV V S+G + + G ++DMTT K A+DAPVSGGD GA+ GTLAI GG++ + P+F+LMG+ + Y G +G GQ ++ I IA Sbjct: 5 IGFIGLGVMGKSMASHILNDGHPVLVYTRTKEKAESILQKGAIWKDTVKDLSKEADVIITMVGYPSDVEEVYF-GSNGIIENAKEGAYLIDMTTSKPSLAKKIAEAAKEKALFALDAPVSGGDIGAQNGTLAIMVGGEKEAFEACMPIFSLMGENIQYQGPAGSGQHTKMCNQIAIA 180
BLAST of FC932025 vs. ExPASy Swiss-Prot
Match: GLYR1_XENTR (Putative oxidoreductase GLYR1 OS=Xenopus tropicalis GN=glyr1 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.397e-23 Identity = 57/167 (34.13%), Postives = 90/167 (53.89%), Query Frame = 1 Query: 130 VCPTNTRVGWIGTGVMGRSMCAHLLNAGYTVTVFNRTLSKAQPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHPSSGALSGLRPGGIIVDMTTXXXXXXXXXXXXXXXKNCSAIDAPVSGGDRGAKTGTLAIFAGGDESVVQKLNPLFALMGKVNYMGG 630 + PT+ ++G++G G+MG + ++LL G+TVTV+NRT K + GAH+ +P + S D+ F+ V P + ++L P SG L G+RPG VDM+T + ++APVSG + + G L I A GD+ V + + F MGK ++ G Sbjct: 244 IIPTDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGAHMGRTPAEVVSTCDITFACVADPKAAKDLVLGP-SGVLQGIRPGKCYVDMSTVDPETVAELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDQGVYEDCSSCFLAMGKTSFFLG 409
BLAST of FC932025 vs. ExPASy Swiss-Prot
Match: Y1503_SHEFN (Uncharacterized oxidoreductase Sfri_1503 OS=Shewanella frigidimarina (strain NCIMB 400) GN=Sfri_1503 PE=3 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 2.384e-23 Identity = 65/179 (36.31%), Postives = 93/179 (51.96%), Query Frame = 1 Query: 148 RVGWIGTGVMGRSMCAHLLNAGYTVTVFNRTLSKA-QPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHPSSGALSGLRPGGIIVDMTTXXXXXXXXXXXXXXXKNCSAIDAPVSGGDRGAKTGTLAIFAGGDESVVQKLNPLFALMGK-VNYMGGSGKGQFAELAKSITIA 678 +V +IG GVMG M HL+ G+ VTV+NRT +KA Q + G AD+P A D+VF+ VG D+R V+L G + G+ G I+VD TT N + +DAPVSGG GA+ G L + GGD++ + P+ + + +G G GQ ++ I IA Sbjct: 3 KVAFIGLGVMGFPMAGHLVKQGHDVTVYNRTGAKATQWVEQYGGKKADTPKDAAQGQDIVFTCVGNDDDLRQVVL-GEHGIVHGMHAGAILVDHTTASADVAREIAAYIEPLNIAFLDAPVSGGQAGAENGALTVMMGGDQAHFDTVKPVISAYSRCAELLGPVGAGQLTKMVNQICIA 180
BLAST of FC932025 vs. ExPASy Swiss-Prot
Match: GLYR1_DANRE (Putative oxidoreductase GLYR1 OS=Danio rerio GN=glyr1 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.384e-23 Identity = 61/183 (33.33%), Postives = 92/183 (50.27%), Query Frame = 1 Query: 109 TVASTDPVCPTNTRVGWIGTGVMGRSMCAHLLNAGYTVTVFNRTLSKAQPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHPSSGALSGLRPGGIIVDMTTXXXXXXXXXXXXXXXKNCSAIDAPVSGGDRGAKTGTLAIFAGGDESVVQKLNPLFALMGKVNYMGGSGKGQFAEL 657 + A + PT+ R+G++G G+MG + ++LL G+ VTV+NRT K + GA L +P + S D+ FS V P R ++L P SG L G+RPG V+M+T + ++APVSG + + G L I A GD SV + + F MGK ++ G A + Sbjct: 164 STAINGSITPTDKRIGFLGLGLMGSGVVSNLLKMGHVVTVWNRTAEKCDLFIQEGARLGRTPAEVVSMCDITFSCVSDPKAARDLVLGP-SGVLQGIRPGKCYVEMSTVDPETITELSQVITSRGGRFLEAPVSGSQQLSNDGMLVIVAAGDRSVYEDCSSCFQAMGKTSFFIAGEAGNAARM 345
BLAST of FC932025 vs. ExPASy Swiss-Prot
Match: GLYR1_BOVIN (Putative oxidoreductase GLYR1 OS=Bos taurus GN=GLYR1 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.545e-22 Identity = 58/174 (33.33%), Postives = 90/174 (51.72%), Query Frame = 1 Query: 109 TVASTDPVCPTNTRVGWIGTGVMGRSMCAHLLNAGYTVTVFNRTLSKAQPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHPSSGALSGLRPGGIIVDMTTXXXXXXXXXXXXXXXKNCSAIDAPVSGGDRGAKTGTLAIFAGGDESVVQKLNPLFALMGKVNYMGG 630 + A V PT+ ++G++G G+MG + ++LL G+TVTV+NRT K + GA L +P + S D+ F+ V P + ++L P SG L G+RPG VDM+T + ++APVSG + + G L I A GD + + + F MGK ++ G Sbjct: 256 STAVNGSVTPTDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGP-SGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLG 428
BLAST of FC932025 vs. ExPASy Swiss-Prot
Match: GLYR1_RAT (Putative oxidoreductase GLYR1 OS=Rattus norvegicus GN=Glyr1 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.018e-22 Identity = 57/174 (32.76%), Postives = 90/174 (51.72%), Query Frame = 1 Query: 109 TVASTDPVCPTNTRVGWIGTGVMGRSMCAHLLNAGYTVTVFNRTLSKAQPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHPSSGALSGLRPGGIIVDMTTXXXXXXXXXXXXXXXKNCSAIDAPVSGGDRGAKTGTLAIFAGGDESVVQKLNPLFALMGKVNYMGG 630 + A + PT+ ++G++G G+MG + ++LL G+TVTV+NRT K + GA L +P + S D+ F+ V P + ++L P SG L G+RPG VDM+T + ++APVSG + + G L I A GD + + + F MGK ++ G Sbjct: 255 STAVNGSITPTDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGP-SGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLG 427
BLAST of FC932025 vs. ExPASy Swiss-Prot
Match: GLYR1_HUMAN (Putative oxidoreductase GLYR1 OS=Homo sapiens GN=GLYR1 PE=1 SV=3) HSP 1 Score: 105.916 bits (263), Expect = 2.018e-22 Identity = 57/174 (32.76%), Postives = 90/174 (51.72%), Query Frame = 1 Query: 109 TVASTDPVCPTNTRVGWIGTGVMGRSMCAHLLNAGYTVTVFNRTLSKAQPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHPSSGALSGLRPGGIIVDMTTXXXXXXXXXXXXXXXKNCSAIDAPVSGGDRGAKTGTLAIFAGGDESVVQKLNPLFALMGKVNYMGG 630 + A + PT+ ++G++G G+MG + ++LL G+TVTV+NRT K + GA L +P + S D+ F+ V P + ++L P SG L G+RPG VDM+T + ++APVSG + + G L I A GD + + + F MGK ++ G Sbjct: 256 STAVNGSITPTDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGP-SGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLG 428
BLAST of FC932025 vs. ExPASy Swiss-Prot
Match: GLYR1_CHICK (Putative oxidoreductase GLYR1 OS=Gallus gallus GN=GLYR1 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.018e-22 Identity = 57/174 (32.76%), Postives = 90/174 (51.72%), Query Frame = 1 Query: 109 TVASTDPVCPTNTRVGWIGTGVMGRSMCAHLLNAGYTVTVFNRTLSKAQPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHPSSGALSGLRPGGIIVDMTTXXXXXXXXXXXXXXXKNCSAIDAPVSGGDRGAKTGTLAIFAGGDESVVQKLNPLFALMGKVNYMGG 630 + A + PT+ ++G++G G+MG + ++LL G+TVTV+NRT K + GA L +P + S D+ F+ V P + ++L P SG L G+RPG VDM+T + ++APVSG + + G L I A GD + + + F MGK ++ G Sbjct: 256 STAVNGSITPTDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGP-SGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLG 428
BLAST of FC932025 vs. ExPASy Swiss-Prot
Match: GARR_ECOLI (2-hydroxy-3-oxopropionate reductase OS=Escherichia coli (strain K12) GN=garR PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.708e-21 Identity = 57/178 (32.02%), Postives = 95/178 (53.37%), Query Frame = 1 Query: 148 RVGWIGTGVMGRSMCAHLLNAGYTVTVFNRTLSKAQPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHPSSGALSGLRPGGIIVDMTTXXXXXXXXXXXXXXXKNCSAIDAPVSGGDRGAKTGTLAIFAGGDESVVQKLNPLF-ALMGKVNYMGGSGKGQFAELAKSITIA 678 +VG+IG G+MG+ M +LL AGY++ V +R ++ GA A + ++A Q DV+ +++ V+ V L +G + G +PG +++DM++ K +DAPVSGG+ A GTL++ GGD+++ K L A+ G V + G G G +LA + +A Sbjct: 2 KVGFIGLGIMGKPMSKNLLKAGYSLVVADRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALG-ENGIIEGAKPGTVLIDMSSIAPLASREISEALKAKGIDMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVVHTGEIGAGNVTKLANQVIVA 178
BLAST of FC932025 vs. ExPASy Swiss-Prot
Match: GARR_ECOL6 (2-hydroxy-3-oxopropionate reductase OS=Escherichia coli O6 GN=garR PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.708e-21 Identity = 57/178 (32.02%), Postives = 95/178 (53.37%), Query Frame = 1 Query: 148 RVGWIGTGVMGRSMCAHLLNAGYTVTVFNRTLSKAQPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHPSSGALSGLRPGGIIVDMTTXXXXXXXXXXXXXXXKNCSAIDAPVSGGDRGAKTGTLAIFAGGDESVVQKLNPLF-ALMGKVNYMGGSGKGQFAELAKSITIA 678 +VG+IG G+MG+ M +LL AGY++ V +R ++ GA A + ++A Q DV+ +++ V+ V L +G + G +PG +++DM++ K +DAPVSGG+ A GTL++ GGD+++ K L A+ G V + G G G +LA + +A Sbjct: 2 KVGFIGLGIMGKPMSKNLLKAGYSLVVADRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALG-ENGIIEGAKPGTVLIDMSSIAPLASREISEALKAKGIDMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVVHTGEIGAGNVTKLANQVIVA 178 The following BLAST results are available for this feature:
BLAST of FC932025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932025 ID=FC932025; Name=FC932025; organism=Citrus clementina; type=EST; length=679bpback to top |