FC932040

Overview
NameFC932040
Unique NameFC932040
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length690
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15174 contig Ccv1_Contig15174:2..691. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932040 vs. ExPASy Swiss-Prot
Match: PIMT_ARATH (Protein-L-isoaspartate O-methyltransferase OS=Arabidopsis thaliana GN=PCM PE=2 SV=3)

HSP 1 Score: 226.483 bits (576), Expect = 3.399e-60
Identity = 106/151 (70.20%), Postives = 132/151 (87.42%), Query Frame = 2
Query:  200 MERYRSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGRK 652
            M+++ S S +NKNKAMVE+LQ++G++TS +V++ ME +DR  FV D +  YVDSPM+IGYN TISAPHMHA CLQLLE++LKPGM  LD+GSGTGYLTACFA+MVG +GRA+GVEHIPELVASS++NIE SAA+P LKEGSL+VHVGDGR+
Sbjct:    1 MKQFWSPSSINKNKAMVENLQNHGIVTSDEVAKAMEAVDRGVFVTDRSSAYVDSPMSIGYNVTISAPHMHAMCLQLLEKHLKPGMRVLDVGSGTGYLTACFAVMVGTEGRAIGVEHIPELVASSVKNIEASAASPFLKEGSLAVHVGDGRQ 151          

HSP 2 Score: 26.9498 bits (58), Expect = 3.399e-60
Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 1
Query:  646 KKGWPEFAPYDA 681
            ++GW EFAPYDA
Sbjct:  150 RQGWAEFAPYDA 161          
BLAST of FC932040 vs. ExPASy Swiss-Prot
Match: PIMT_WHEAT (Protein-L-isoaspartate O-methyltransferase OS=Triticum aestivum GN=PCM PE=1 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.394e-58
Identity = 103/150 (68.67%), Postives = 129/150 (86.00%), Query Frame = 2
Query:  200 MERYRSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGR 649
            M ++ +   + KN A+VE+L+ YGV+ + KV+EVMETIDRA FVP+G  PY DSPM IGYNATISAPHMHATCL+LL++ L+PGMHALD+GSG+GYLTACFA+MVGP+GRAVG+EHIPELV +S +N+E+SAAA L+K+GSLS HV DGR
Sbjct:    1 MAQFWAEGSLEKNNALVEYLKQYGVVRTDKVAEVMETIDRALFVPEGFTPYTDSPMPIGYNATISAPHMHATCLELLKDYLQPGMHALDVGSGSGYLTACFAMMVGPEGRAVGIEHIPELVVASTENVERSAAAALMKDGSLSFHVSDGR 150          

HSP 2 Score: 24.6386 bits (52), Expect = 1.394e-58
Identity = 8/10 (80.00%), Postives = 9/10 (90.00%), Query Frame = 1
Query:  652 GWPEFAPYDA 681
            GWP+ APYDA
Sbjct:  152 GWPDAAPYDA 161          
BLAST of FC932040 vs. ExPASy Swiss-Prot
Match: PIMT_CHICK (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Gallus gallus GN=PCMT1 PE=2 SV=3)

HSP 1 Score: 134.806 bits (338), Expect = 4.164e-31
Identity = 71/143 (49.65%), Postives = 94/143 (65.73%), Query Frame = 2
Query:  221 SGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGR 649
            SG   +  ++ +L+  G+I S KV EVM   DR  +      PY+DSP +IG+ ATISAPHMHA  L+LL + L  G  ALD+GSG+G LTACF+ MVGP+G+ VG++HI ELV  SI N++K     LL  G + + VGDGR
Sbjct:    5 SGGASHSELIHNLRKNGIIKSDKVFEVMLATDRCHYAKYN--PYMDSPQSIGFQATISAPHMHAYALELLSDQLHEGAKALDVGSGSGILTACFSRMVGPKGQVVGIDHIKELVDDSINNVKKDDPT-LLSSGRVKLIVGDGR 144          
BLAST of FC932040 vs. ExPASy Swiss-Prot
Match: PIMT_BOVIN (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Bos taurus GN=PCMT1 PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.212e-30
Identity = 70/143 (48.95%), Postives = 93/143 (65.03%), Query Frame = 2
Query:  221 SGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGR 649
            SG   +  ++ +L+  G+I + KV EVM   DR+ +      PY+DSP +IG+ ATISAPHMHA  L+LL + L  G  ALD+GSG+G LTACFA MVGP G+ +G++HI ELV  SI N+ K     LL  G + + VGDGR
Sbjct:    5 SGGASHSELIHNLRKNGIIKTDKVFEVMLATDRSHYAKCN--PYMDSPQSIGFQATISAPHMHAYALELLFDQLNEGAKALDVGSGSGILTACFARMVGPSGKVIGIDHIKELVDDSINNVRKDDPM-LLSSGRVQLVVGDGR 144          
BLAST of FC932040 vs. ExPASy Swiss-Prot
Match: PIMT_PIG (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Sus scrofa GN=PCMT1 PE=1 SV=3)

HSP 1 Score: 132.88 bits (333), Expect = 1.582e-30
Identity = 70/143 (48.95%), Postives = 93/143 (65.03%), Query Frame = 2
Query:  221 SGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGR 649
            SG   +  ++ +L+  G+I + KV EVM   DR+ +      PY+DSP +IG+ ATISAPHMHA  L+LL + L  G  ALD+GSG+G LTACFA MVGP G+ +G++HI ELV  SI N+ K     LL  G + + VGDGR
Sbjct:    5 SGGASHSELIHNLRKNGIIKTDKVFEVMLATDRSHYAKCN--PYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGPSGKVIGIDHIKELVDDSINNVRKDDPM-LLSSGRVQLVVGDGR 144          
BLAST of FC932040 vs. ExPASy Swiss-Prot
Match: PIMT_DANRE (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Danio rerio GN=pcmt PE=2 SV=3)

HSP 1 Score: 132.109 bits (331), Expect = 2.699e-30
Identity = 69/143 (48.25%), Postives = 95/143 (66.43%), Query Frame = 2
Query:  221 SGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGR 649
            SG   +  +V +L+  G+I S +V EVM   DR+ F      PY+DSP +IGY ATISAPHMHA  L+LL ++L  G  ALD+GSG+G L+ CF+ MVGP G+ +G++HI ELV  SI N++K   + L+  G + + VGDGR
Sbjct:    5 SGGASHAELVNNLRKNGIIKSDRVYEVMLATDRSHF--SRCNPYMDSPQSIGYQATISAPHMHAYALELLHDHLYEGAKALDVGSGSGILSVCFSRMVGPTGKVIGIDHIKELVEDSIANVKKDDPS-LITSGRIKLIVGDGR 144          
BLAST of FC932040 vs. ExPASy Swiss-Prot
Match: PIMT_RAT (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Rattus norvegicus GN=Pcmt1 PE=1 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.026e-29
Identity = 69/143 (48.25%), Postives = 93/143 (65.03%), Query Frame = 2
Query:  221 SGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGR 649
            SG   +  ++ +L+  G+I + KV EVM   DR+ +      PY+DSP +IG+ ATISAPHMHA  L+LL + L  G  ALD+GSG+G LTACFA MVG  G+ +G++HI ELV  SI N++K     LL  G + + VGDGR
Sbjct:    5 SGGASHSELIHNLRKNGIIKTDKVFEVMLATDRSHYAKSN--PYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGHSGKVIGIDHIKELVDDSITNVKKDDPM-LLSSGRVRLVVGDGR 144          
BLAST of FC932040 vs. ExPASy Swiss-Prot
Match: PIMT_MOUSE (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Mus musculus GN=Pcmt1 PE=1 SV=3)

HSP 1 Score: 130.183 bits (326), Expect = 1.026e-29
Identity = 69/143 (48.25%), Postives = 93/143 (65.03%), Query Frame = 2
Query:  221 SGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGR 649
            SG   +  ++ +L+  G+I + KV EVM   DR+ +      PY+DSP +IG+ ATISAPHMHA  L+LL + L  G  ALD+GSG+G LTACFA MVG  G+ +G++HI ELV  SI N++K     LL  G + + VGDGR
Sbjct:    5 SGGASHSELIHNLRKNGIIKTDKVFEVMLATDRSHYAKSN--PYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGNSGKVIGIDHIKELVDDSITNVKKDDPM-LLSSGRVRLVVGDGR 144          
BLAST of FC932040 vs. ExPASy Swiss-Prot
Match: PIMT_SCHPO (Probable protein-L-isoaspartate O-methyltransferase OS=Schizosaccharomyces pombe GN=pcm2 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.285e-29
Identity = 68/146 (46.58%), Postives = 91/146 (62.33%), Query Frame = 2
Query:  227 VNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEK-----SAAAPLLKEGSLSVHVGDGR 649
            ++ N A+V+HL     +T+++  + M    R+ + P    PY+DSP +IGY  TISAPHMHAT LQ LE  L+PG  ALDIGSG+GYL A  A MV P G   G+EHIP+LV +S +N+ K          + KE  L ++VGDGR
Sbjct:    7 LSSNAALVQHLVESKFLTNQRAIKAMNATSRSFYCP--LSPYMDSPQSIGYGVTISAPHMHATALQELEPVLQPGCSALDIGSGSGYLVAAMARMVAPNGTVKGIEHIPQLVETSKKNLLKDINHDEVLMEMYKEKRLQINVGDGR 150          
BLAST of FC932040 vs. ExPASy Swiss-Prot
Match: PIMT_PONAB (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Pongo abelii GN=PCMT1 PE=2 SV=3)

HSP 1 Score: 129.028 bits (323), Expect = 2.285e-29
Identity = 69/143 (48.25%), Postives = 92/143 (64.34%), Query Frame = 2
Query:  221 SGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSIQNIEKSAAAPLLKEGSLSVHVGDGR 649
            SG   +  ++ +L+  G+I + KV EVM   DR+ +      PY+DSP +IG+ ATISAPHMHA  L+LL + L  G  ALD+GSG+G LTACFA MVG  G+ +G++HI ELV  SI N+ K     LL  G + + VGDGR
Sbjct:    5 SGGASHSELIHNLRKNGIIKTDKVFEVMLATDRSHYAKCN--PYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSINNVRKDDPT-LLSSGRVQLVVGDGR 144          
The following BLAST results are available for this feature:
BLAST of FC932040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
PIMT_ARATH3.399e-6070.20Protein-L-isoaspartate O-methyltransferase OS=Arab... [more]
PIMT_WHEAT1.394e-5868.67Protein-L-isoaspartate O-methyltransferase OS=Trit... [more]
PIMT_CHICK4.164e-3149.65Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]
PIMT_BOVIN1.212e-3048.95Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]
PIMT_PIG1.582e-3048.95Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]
PIMT_DANRE2.699e-3048.25Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]
PIMT_RAT1.026e-2948.25Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]
PIMT_MOUSE1.026e-2948.25Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]
PIMT_SCHPO2.285e-2946.58Probable protein-L-isoaspartate O-methyltransferas... [more]
PIMT_PONAB2.285e-2948.25Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]

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Properties
Property NameValue
Genbank descriptionC34204A05EF PostHarveN Citrus clementina cDNA clone C34204A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932040 ID=FC932040; Name=FC932040; organism=Citrus clementina; type=EST; length=690bp
GATAGCGTATGGTTTCCGCTATTATTATATGCCTGGTTTAAAGCACATAT
TATCAACCTTCACTCTTATCCCTCACCGTCATCGCTGTTCTTACTTACCA
TCACCGTCACCGTCACTTGTCTCTTTGTCTTCTTCTTTTCATCTTCCAAA
TCCAGATAACCTCAGTCGTTTCCTCACGGGTAACTGTCCCTTTTTCAAGA
TGGAGCGATACCGGAGTGGAAGTGGTGTCAACAAGAATAAAGCGATGGTG
GAGCATTTGCAGCATTATGGAGTGATTACATCAAAAAAGGTATCTGAAGT
AATGGAAACTATTGATCGGGCTTGCTTTGTGCCAGATGGTACTCCACCTT
ATGTTGACAGCCCAATGGCAATAGGTTACAATGCCACTATTTCAGCACCT
CATATGCATGCAACATGCCTTCAATTATTGGAGGAGAATCTGAAACCTGG
CATGCACGCTTTGGATATTGGTTCTGGAACTGGATATTTGACAGCATGCT
TTGCCTTGATGGTTGGACCACAAGGTCGTGCTGTGGGTGTCGAGCACATT
CCTGAGTTGGTGGCTTCATCAATCCAGAATATTGAAAAAAGTGCAGCGGC
TCCATTGCTGAAAGAAGGTTCTCTCTCAGTGCATGTTGGTGATGGAAGAA
AGGTTGGCCAGAGTTTGCTCCCTATGATGCATACATGTCG
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