FC932050

Overview
NameFC932050
Unique NameFC932050
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length587
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC932050_ssr148 microsatellite FC932050_ssr148:148..157. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: WAKLO_ARATH (Wall-associated receptor kinase-like 14 OS=Arabidopsis thaliana GN=WAKL14 PE=2 SV=2)

HSP 1 Score: 313.538 bits (802), Expect = 4.776e-85
Identity = 149/195 (76.41%), Postives = 168/195 (86.15%), Query Frame = 1
Query:    1 VDQVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            +DQVMNE KLLSS  HPNL+RLL CCIE+G+P+LVYE+MP+GTL +HLQR+RGSGLPW               YLHS+MNPPIYHRDIKS+NILLDY++ SKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQ FHL DKSDVYSFGVVL EIIT LKVVDF+RPH+E+NLAALA+D+IG GC+DEIIDP L
Sbjct:  386 LDQVMNEIKLLSSVSHPNLVRLLGCCIEQGDPVLVYEYMPNGTLSEHLQRDRGSGLPWTLRLTVATQTAKAIAYLHSSMNPPIYHRDIKSTNILLDYDFNSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQCFHLSDKSDVYSFGVVLAEIITGLKVVDFTRPHTEINLAALAVDKIGSGCIDEIIDPIL 580          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: WAKLR_ARATH (Wall-associated receptor kinase-like 21 OS=Arabidopsis thaliana GN=WAKL21 PE=1 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 4.637e-72
Identity = 136/199 (68.34%), Postives = 158/199 (79.40%), Query Frame = 1
Query:    1 VDQVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSG-LPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT---ESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            +DQV+NE KLLSS  HPNL+RLL CC  +GEP LVYEFMP+GTL QHLQ ERG   L W               +LHS++NPPIYHRDIKSSNILLD+ + SK++DFGLSRLGM+   E+SHISTAPQGTPGYLDPQYHQ F L DKSDVYSFGVVL+EII+  KV+DF+RP+SEVNLA+LA+DRIGRG V +IIDP L
Sbjct:  350 IDQVVNEIKLLSSVSHPNLVRLLGCCFADGEPFLVYEFMPNGTLYQHLQHERGQPPLSWQLRLAIACQTANAIAHLHSSVNPPIYHRDIKSSNILLDHEFNSKISDFGLSRLGMSTDFEASHISTAPQGTPGYLDPQYHQDFQLSDKSDVYSFGVVLVEIISGFKVIDFTRPYSEVNLASLAVDRIGRGRVVDIIDPCL 548          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: WAKLP_ARATH (Wall-associated receptor kinase-like 15 OS=Arabidopsis thaliana GN=WAKL15 PE=2 SV=2)

HSP 1 Score: 193.741 bits (491), Expect = 5.516e-49
Identity = 98/199 (49.25%), Postives = 129/199 (64.82%), Query Frame = 1
Query:    7 QVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSG------LPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            Q++NE ++L    H NL++LL CCIE   P+LVYEF+P+GTL +H+    G G      LP                YLHS+ +PPIYHRD+KSSNILLD N   KVADFGLSRLG+++ SH++T  QGT GYLDP+Y+  F L DKSDVYSFGVVL E++T  K +DF+R   +VNL       +  G + ++IDP +
Sbjct:  394 QIVNEVQILCQVSHKNLVKLLGCCIELEMPVLVYEFVPNGTLFEHIYGGGGGGGGLYDHLPLRRRLMIAHQTAQGLDYLHSSSSPPIYHRDVKSSNILLDENLDVKVADFGLSRLGVSDVSHVTTCAQGTLGYLDPEYYLNFQLTDKSDVYSFGVVLFELLTCKKAIDFNREEEDVNLVVFVRKALKEGRLMDVIDPVI 592          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.661e-45
Identity = 97/202 (48.02%), Postives = 128/202 (63.37%), Query Frame = 1
Query:    4 DQVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERG---SGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRL-GMTES----SHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            DQ++NE ++L    H +L+RLL CC++   P+L+YEF+P+GTL +HL          L W               YLHSA  PPIYHRD+KSSNILLD    +KV+DFGLSRL  +TE+    SHI T  QGT GYLDP+Y++ F L DKSDVYSFGVVL+E++T+ K +DF+R   +VNL       + +  + E IDP L
Sbjct:  402 DQILNEVRILCQVNHRSLVRLLGCCVDLELPLLIYEFIPNGTLFEHLHGSSDRTWKPLTWRRRLQIAYQTAEGLAYLHSAAQPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVDLTETANNESHIFTGAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEMVTSKKAIDFTREEEDVNLVMYINKMMDQERLTECIDPLL 603          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: Y1839_ARATH (Probable serine/threonine-protein kinase At1g18390 OS=Arabidopsis thaliana GN=At1g18390 PE=1 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 7.715e-43
Identity = 90/197 (45.69%), Postives = 127/197 (64.47%), Query Frame = 1
Query:    4 DQVMNEGKLLSSGRHPNLLRLLRCCIEEGEPIL-VYEFMPHGTLCQHLQRERG--SGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            +Q  NE ++L+  RHPNL+ L  C  ++   +L VYE++ +GTL  HL   +   S LPW               YLH++    I HRD+KS+NILLD N+  KVADFGLSRL   + +H+STAPQGTPGY+DP YH  + L +KSDVYSF VVL+E+I++L  VD +RP  E+NL+ +A+ +I    + +++DP L
Sbjct:  383 EQFRNEVEILTGLRHPNLVALFGCSSKQSRDLLLVYEYVANGTLADHLHGPQANPSSLPWSIRLKIAVETASALKYLHASK---IIHRDVKSNNILLDQNFNVKVADFGLSRLFPMDKTHVSTAPQGTPGYVDPDYHLCYQLSNKSDVYSFAVVLMELISSLPAVDITRPRQEINLSNMAVVKIQNHELRDMVDPSL 576          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 1.779e-39
Identity = 83/194 (42.78%), Postives = 116/194 (59.79%), Query Frame = 1
Query:    1 VDQVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSGL--PWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIID 576
            +++ +NE  +LS   H N+++LL CC+E   P+LVYEF+P+G L +HL  E    +   W               YLHS+ + PIYHRD+KS+NI+LD  YR+KV+DFG SR    + +H++T   GT GY+DP+Y Q     DKSDVYSFGVVL+E+IT  K + F R      LA   I  +    + +IID
Sbjct:  485 LEEFINEVVILSQINHRNIVKLLGCCLETKVPVLVYEFIPNGNLFEHLHDEFDENIMATWNIRLRIAIDIAGALSYLHSSASSPIYHRDVKSTNIMLDEKYRAKVSDFGTSRTVTVDHTHLTTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLVELITGEKSISFLRSQENRTLATYFILAMKENKLFDIID 678          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: WAKLJ_ARATH (Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 4.381e-38
Identity = 84/194 (43.30%), Postives = 114/194 (58.76%), Query Frame = 1
Query:    1 VDQVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERG--SGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIID 576
            +++ +NE  +LS   H N+++LL CC+E   PILVYEF+P+G L +HL  +    +   W               YLHSA + PIYHRDIKS+NI+LD  +R+KV+DFG SR    + +H++T   GT GY+DP+Y Q     DKSDVYSFGVVL E+IT  K V F R      LA      +    + +IID
Sbjct:  471 LEEFINEVVILSQINHRNIVKLLGCCLETDVPILVYEFIPNGNLFEHLHDDSDDYTMTTWEVRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNIMLDEKHRAKVSDFGTSRTVTVDHTHLTTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLAELITGEKSVSFLRSQEYRTLATYFTLAMKENRLSDIID 664          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 5.721e-38
Identity = 89/193 (46.11%), Postives = 121/193 (62.69%), Query Frame = 1
Query:   19 EGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRERGSGLP---WXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLG-MTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYL 585
            E ++LS  RH +L+ L+  C E  E IL+YE+M +GT+  HL    GSGLP   W               YLH+  + P+ HRD+KS+NILLD N+ +KVADFGLS+ G   + +H+STA +G+ GYLDP+Y +   L DKSDVYSFGVVL E++ A  V+D + P   VNLA  A+    +G +D+IID  L
Sbjct:  529 EIEMLSQFRHRHLVSLIGYCDENNEMILIYEYMENGTVKSHLY---GSGLPSLTWKQRLEICIGAARGLHYLHTGDSKPVIHRDVKSANILLDENFMAKVADFGLSKTGPELDQTHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPVIDPTLPREMVNLAEWAMKWQKKGQLDQIIDQSL 718          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: WAK1_ARATH (Wall-associated receptor kinase 1 OS=Arabidopsis thaliana GN=WAK1 PE=1 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 1.275e-37
Identity = 86/192 (44.79%), Postives = 114/192 (59.38%), Query Frame = 1
Query:    1 VDQVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRER-GSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEII 573
            V+Q +NE  +LS   H N+++LL CC+E   P+LVYEF+ +GTL  HL      S L W               YLHS+ + PI HRDIK++NILLD N  +KVADFG SRL   +   + T  QGT GYLDP+Y+    L +KSDVYSFGVVL+E+++  K + F RP S  +L +          +DEII
Sbjct:  447 VEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFITNGTLFDHLHGSMIDSSLTWEHRLKIAIEVAGTLAYLHSSASIPIIHRDIKTANILLDVNLTAKVADFGASRLIPMDKEELETMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFKRPQSSKHLVSYFATATKENRLDEII 638          
BLAST of FC932050 vs. ExPASy Swiss-Prot
Match: WAK5_ARATH (Wall-associated receptor kinase 5 OS=Arabidopsis thaliana GN=WAK5 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.665e-37
Identity = 85/193 (44.04%), Postives = 115/193 (59.59%), Query Frame = 1
Query:    1 VDQVMNEGKLLSSGRHPNLLRLLRCCIEEGEPILVYEFMPHGTLCQHLQRER-GSGLPWXXXXXXXXXXXXXXXYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLPDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIID 576
            V+Q +NE  +LS   H N+++LL CC+E   P+LVYEF+  GTL  HL      S L W               YLHS  + PI HRD+K++NILLD N  +KVADFG SRL   +   ++T  QGT GYLDP+Y+    L +KSDVYSFGVVL+E+++  K + F RP S  +L +  +  +    + EIID
Sbjct:  446 VEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFISSGTLFDHLHGSMFDSSLTWEHRLRIAIEVAGTLAYLHSYASIPIIHRDVKTANILLDENLTAKVADFGASRLIPMDQEQLTTMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGEKALCFERPQSSKHLVSYFVSAMKENRLHEIID 638          
The following BLAST results are available for this feature:
BLAST of FC932050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
WAKLO_ARATH4.776e-8576.41Wall-associated receptor kinase-like 14 OS=Arabido... [more]
WAKLR_ARATH4.637e-7268.34Wall-associated receptor kinase-like 21 OS=Arabido... [more]
WAKLP_ARATH5.516e-4949.25Wall-associated receptor kinase-like 15 OS=Arabido... [more]
WAKLQ_ARATH1.661e-4548.02Wall-associated receptor kinase-like 20 OS=Arabido... [more]
Y1839_ARATH7.715e-4345.69Probable serine/threonine-protein kinase At1g18390... [more]
WAKLH_ARATH1.779e-3942.78Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
WAKLJ_ARATH4.381e-3843.30Wall-associated receptor kinase-like 10 OS=Arabido... [more]
HERK_ARATH5.721e-3846.11Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]
WAK1_ARATH1.275e-3744.79Wall-associated receptor kinase 1 OS=Arabidopsis t... [more]
WAK5_ARATH1.665e-3744.04Wall-associated receptor kinase 5 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionC34204B03EF PostHarveN Citrus clementina cDNA clone C34204B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932050 ID=FC932050; Name=FC932050; organism=Citrus clementina; type=EST; length=587bp
GTTGACCAAGTTATGAATGAGGGGAAGCTTCTCTCCTCTGGGAGACACCC
AAATCTACTTCGACTCCTAAGGTGCTGCATCGAGGAAGGTGAGCCTATAC
TTGTTTATGAATTTATGCCCCATGGTACTCTGTGTCAGCATCTGCAAAGA
GAGAGAGGAAGTGGACTTCCTTGGACAATACGGATTACCATAGCCACTGA
GACTGCTCAAGCAATTGCCTATCTTCACTCAGCTATGAATCCACCAATTT
ACCACCGAGACATCAAATCCAGCAATATACTATTGGATTACAACTATAGG
TCAAAGGTAGCGGATTTTGGGCTTTCCAGACTTGGCATGACTGAGTCATC
TCACATCTCAACTGCTCCACAAGGAACTCCAGGCTACCTTGATCCTCAAT
ACCATCAGTATTTCCATCTTCCTGACAAAAGTGATGTTTACAGTTTTGGG
GTAGTTCTTATTGAGATCATAACTGCACTGAAAGTGGTTGATTTTTCTCG
CCCTCACAGTGAGGTGAATTTGGCTGCACTTGCTATTGATAGGATTGGAA
GAGGTTGTGTGGATGAGATAATAGATCCATACCTTGA
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