FC932059

Overview
NameFC932059
Unique NameFC932059
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15437 contig Ccv1_Contig15437:1..705. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932059 vs. ExPASy Swiss-Prot
Match: NAC4_ARATH (NAC domain-containing protein 4 OS=Arabidopsis thaliana GN=NAC004 PE=2 SV=2)

HSP 1 Score: 63.1586 bits (152), Expect = 3.973e-15
Identity = 34/80 (42.50%), Postives = 45/80 (56.25%), Query Frame = 1
Query:  361 SEIQSEEEVWYFFCEPCYKNAESRRVRRRTKEGYWKKTGRGSNIKRKY-KTEVIGTKKILSFSRDDAAAEKDKTEWVIHE 597
            S I+S + VWYFF     K     + RRRT  G+WKKTG+   + RK    E IG K++L F   D +    KT+WV+HE
Sbjct:   54 SMIKSRDGVWYFFSVKEMKYNRGDQQRRRTNSGFWKKTGKTMTVMRKRGNREKIGEKRVLVFKNRDGS----KTDWVMHE 129          

HSP 2 Score: 38.891 bits (89), Expect = 3.973e-15
Identity = 23/49 (46.94%), Postives = 27/49 (55.10%), Query Frame = 2
Query:  116 VGFRFYPTDEQII-LLLTMKRRDPAGFSV-RTIKEIDLYSFEPWGLPCK 256
            VGFRF P DE+I+   L  K  D     V   I  +D+ SFEPW LP K
Sbjct:    5 VGFRFRPNDEEIVDHYLRPKNLDSDTSHVDEVISTVDICSFEPWDLPSK 53          
BLAST of FC932059 vs. ExPASy Swiss-Prot
Match: NAC7_ARATH (NAC domain-containing protein 7 OS=Arabidopsis thaliana GN=NAC007 PE=2 SV=2)

HSP 1 Score: 55.0694 bits (131), Expect = 3.219e-14
Identity = 33/88 (37.50%), Postives = 45/88 (51.14%), Query Frame = 1
Query:  346 CDAGHSEIQSEEEVWYFFCEPCYKNAESRRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHEIAVE 609
            C  GH E QS+   WYFF     K     R  R TK G+WK TGR   I  ++   +IG +K L F +   A    K++W++HE  +E
Sbjct:   56 CKIGHEE-QSD---WYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLRH--SLIGMRKTLVFYK-GRAPNGQKSDWIMHEYRLE 136          

HSP 2 Score: 43.8986 bits (102), Expect = 3.219e-14
Identity = 19/43 (44.19%), Postives = 26/43 (60.47%), Query Frame = 2
Query:  119 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWGL 247
            GFRF+PTDE+++     K+       +  IK+IDLY  EPW L
Sbjct:   10 GFRFHPTDEELVDYYLRKKVASKRIEIDFIKDIDLYKIEPWDL 52          
BLAST of FC932059 vs. ExPASy Swiss-Prot
Match: NAC77_ORYSJ (NAC domain-containing protein 77 OS=Oryza sativa subsp. japonica GN=NAC77 PE=2 SV=2)

HSP 1 Score: 53.9138 bits (128), Expect = 7.059e-14
Identity = 33/93 (35.48%), Postives = 43/93 (46.24%), Query Frame = 1
Query:  361 SEIQSEEEVWYFFCEPCYKNAESRRVRRRTKEGYWKKTGRGSNIKRK--------------YKTEVIGTKKILSFSRDDAAAEKDKTEWVIHE 597
            S+ +  E+ WYFF     K     R  R TKEGYWK TG+   I R+               K +++G KK L F     A +  KT WV+HE
Sbjct:   66 SKAKMGEKEWYFFSHKDMKYPTGMRTNRATKEGYWKATGKDREIFRQPAAVNTSSYGGSSNKKKQLVGMKKTLVFYM-GRAPKGTKTNWVMHE 157          

HSP 2 Score: 43.8986 bits (102), Expect = 7.059e-14
Identity = 20/46 (43.48%), Postives = 28/46 (60.87%), Query Frame = 2
Query:  119 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWGLPCK 256
            GFRF+PTD ++IL   +++     F+   I E+DL   EPW LP K
Sbjct:   22 GFRFHPTDAEVILSYLLQKLLNPSFTSLPIGEVDLNKCEPWDLPSK 67          
BLAST of FC932059 vs. ExPASy Swiss-Prot
Match: NAC5_ARATH (NAC domain-containing protein 5 OS=Arabidopsis thaliana GN=NAC005 PE=2 SV=2)

HSP 1 Score: 59.6918 bits (143), Expect = 2.617e-13
Identity = 34/90 (37.78%), Postives = 51/90 (56.67%), Query Frame = 1
Query:  358 HSEIQSEEEVWYFFCEPCYKNAESRRVRRRTKEGYWKKTGRGSNIKRKY-KTEVIGTKKILSFSRDDAAAEKDKTEWVIHEI-AVENSPD 621
            HS +++ ++VWYFF     K  +  R  R+TK G+WKKTG   +I RK    E IG K++L F     +    K++W +HE  A  +SP+
Sbjct:   53 HSRMKTRDQVWYFFGRKENKYGKGDRQIRKTKSGFWKKTGVTMDIMRKTGDREKIGEKRVLVFKNHGGS----KSDWAMHEYHATFSSPN 138          

HSP 2 Score: 36.1946 bits (82), Expect = 2.617e-13
Identity = 21/51 (41.18%), Postives = 29/51 (56.86%), Query Frame = 2
Query:  104 MDSLVGFRFYPTDEQII-LLLTMKRRDPAGFSV-RTIKEIDLYSFEPWGLP 250
            M + VGFRF PTD +I+ + L  K  +     V   I  +D+ SF+PW LP
Sbjct:    1 MANPVGFRFRPTDGEIVDIYLRPKNLESNTSHVDEVISTVDICSFDPWDLP 51          
BLAST of FC932059 vs. ExPASy Swiss-Prot
Match: NAC78_ARATH (NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=2)

HSP 1 Score: 54.6842 bits (130), Expect = 3.358e-13
Identity = 31/103 (30.10%), Postives = 53/103 (51.46%), Query Frame = 1
Query:  361 SEIQSEEEVWYFFCEPCYKNAESRRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHEIAVENSPDFEVLASFLELHMCCEI 669
            S+++S +  WYFF     K +   +  R T++GYWK TG+   I+    + V+G KK L + +   A   ++T WV+HE  + +  D +      E ++ C I
Sbjct:   58 SKLKSRDLEWYFFSMLDKKYSNGSKTNRATEKGYWKTTGKDREIRN--GSRVVGMKKTLVYHK-GRAPRGERTNWVMHEYRLSDE-DLKKAGVPQEAYVLCRI 156          

HSP 2 Score: 40.817 bits (94), Expect = 3.358e-13
Identity = 18/46 (39.13%), Postives = 25/46 (54.35%), Query Frame = 2
Query:  119 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWGLPCK 256
            GFRF+PTDE+++     ++     F    I   D+Y  EPW LP K
Sbjct:   12 GFRFHPTDEELVRYYLKRKVCNKPFKFDAISVTDIYKSEPWDLPDK 57          
BLAST of FC932059 vs. ExPASy Swiss-Prot
Match: NAC74_ORYSJ (NAC domain-containing protein 74 OS=Oryza sativa subsp. japonica GN=NAC74 PE=2 SV=1)

HSP 1 Score: 53.1434 bits (126), Expect = 4.598e-12
Identity = 30/102 (29.41%), Postives = 49/102 (48.04%), Query Frame = 1
Query:  364 EIQSEEEVWYFFCEPCYKNAESRRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHEIAVENSPDFEVLASFLELHMCCEI 669
            ++ +++  W+FF     K     R  R T  GYWK TG+   IK   +T  IGTKK L F        + +TEW++HE  ++   + +      + ++ C I
Sbjct:   59 DVPTQDNKWHFFAARDRKYPNGSRSNRATVAGYWKSTGKDRAIKMGKQT--IGTKKTLVFHEGRPPTGR-RTEWIMHEYYIDER-ECQACPDMKDAYVLCRI 156          

HSP 2 Score: 38.5058 bits (88), Expect = 4.598e-12
Identity = 17/46 (36.96%), Postives = 23/46 (50.00%), Query Frame = 2
Query:  119 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWGLPCK 256
            GF F+P D ++I     K+          I E+D+Y  EPW LP K
Sbjct:   12 GFGFHPKDTELISHYLKKKIHGQKIEYEIIPEVDIYKHEPWDLPAK 57          
BLAST of FC932059 vs. ExPASy Swiss-Prot
Match: NAC69_ARATH (NAC domain-containing protein 69 OS=Arabidopsis thaliana GN=NAC69 PE=2 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 1.699e-11
Identity = 33/87 (37.93%), Postives = 46/87 (52.87%), Query Frame = 1
Query:  361 SEIQSEEEVWYFFCEPCYKNAESRRVRRRTKEGYWKKTGRGSNIKRKYKTE-VIGTKKILSFSRDDAAAEKDKTEWVIHEIAVENSP 618
            S+I+S++ VWYFFC   Y +A+ +  +R T  GYWK TG    IK K      IG KK L +  +    +   T WV+HE  +   P
Sbjct:   54 SKIKSDDPVWYFFCPKEYTSAKKKVTKRTTSSGYWKATGVDRKIKDKRGNRGEIGIKKTLVY-YEGRVPKGVWTPWVMHEYHITCLP 139          

HSP 2 Score: 31.5722 bits (70), Expect = 1.699e-11
Identity = 19/47 (40.43%), Postives = 26/47 (55.32%), Query Frame = 2
Query:  113 LVGFRFYPTDEQII-LLLTMKRRDPAGFSVRTIKEIDLYSFEPWGLP 250
            LVG+RFYPT E++I   L  K           I EI++ S++P  LP
Sbjct:    5 LVGYRFYPTGEELINHYLKNKILGKTWLVDEAISEINICSYDPIYLP 51          
BLAST of FC932059 vs. ExPASy Swiss-Prot
Match: NAC3_ARATH (NAC domain-containing protein 3 OS=Arabidopsis thaliana GN=NAC003 PE=2 SV=1)

HSP 1 Score: 51.9878 bits (123), Expect = 4.847e-11
Identity = 30/79 (37.97%), Postives = 42/79 (53.16%), Query Frame = 1
Query:  361 SEIQSEEEVWYFFCEPCYKNAESRRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHE 597
            S I+ ++  W FF     K     +  R+TK G+WK TGR   I R    + IG KKIL F      +++ K++WVIHE
Sbjct:   54 SRIKLKDVAWCFFRPKENKYGRGDQQMRKTKSGFWKSTGRPKPIMR--NRQQIGEKKILMF----YTSKESKSDWVIHE 126          

HSP 2 Score: 36.1946 bits (82), Expect = 4.847e-11
Identity = 21/53 (39.62%), Postives = 30/53 (56.60%), Query Frame = 2
Query:  104 MDSLVGFRFYPTDEQIIL-LLTMKRRDPAGFSV-RTIKEIDLYSFEPWGLPCK 256
            M++ VG RF PTDE+I++  L  K  D     V R I  + +   +PW LPC+
Sbjct:    1 METPVGLRFCPTDEEIVVDYLWPKNSDRDTSHVDRFINTVPVCRLDPWELPCQ 53          
The following BLAST results are available for this feature:
BLAST of FC932059 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
NAC4_ARATH3.973e-1542.50NAC domain-containing protein 4 OS=Arabidopsis tha... [more]
NAC7_ARATH3.219e-1437.50NAC domain-containing protein 7 OS=Arabidopsis tha... [more]
NAC77_ORYSJ7.059e-1435.48NAC domain-containing protein 77 OS=Oryza sativa s... [more]
NAC5_ARATH2.617e-1337.78NAC domain-containing protein 5 OS=Arabidopsis tha... [more]
NAC78_ARATH3.358e-1330.10NAC domain-containing protein 78 OS=Arabidopsis th... [more]
NAC74_ORYSJ4.598e-1229.41NAC domain-containing protein 74 OS=Oryza sativa s... [more]
NAC69_ARATH1.699e-1137.93NAC domain-containing protein 69 OS=Arabidopsis th... [more]
NAC3_ARATH4.847e-1137.97NAC domain-containing protein 3 OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank descriptionC34204B12EF PostHarveN Citrus clementina cDNA clone C34204B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932059 ID=FC932059; Name=FC932059; organism=Citrus clementina; type=EST; length=705bp
CACTGGCTCTTTTAAGATTTTGCTGACCAAATTGGAAAGAAGAAGCTCTT
ACTCTCTCATTCTTGTTCTACGTTTCTCCTGCTGGGTGTTGAATCAGAAA
CCAATGGACAGTCTCGTGGGGTTCAGATTCTATCCAACTGATGAACAAAT
TATTCTTCTACTGACGATGAAGAGACGTGACCCTGCAGGTTTCTCCGTCC
GTACGATCAAGGAAATCGATCTCTACAGCTTTGAGCCCTGGGGGCTACCC
TGTAAGTAATCGTGCCAACCAAGTACTCTACACGATGTCTGTCTAAGACT
AATTAGTTCAGTAACTAGAATTCAGAAGTTAATGGAATCTTTTGTTGCGA
TGCAGGCCATTCTGAGATTCAGTCTGAGGAAGAAGTGTGGTACTTTTTCT
GTGAACCTTGTTACAAAAATGCCGAGAGTAGACGGGTACGTAGAAGAACA
AAGGAAGGCTATTGGAAAAAGACTGGCAGAGGTTCTAACATCAAGCGCAA
ATACAAAACTGAGGTGATTGGTACGAAGAAGATTTTGTCTTTTTCCCGCG
ATGATGCTGCTGCCGAGAAAGATAAGACTGAGTGGGTTATACACGAGATA
GCTGTTGAAAATAGCCCTGACTTTGAGGTATTAGCCTCTTTTTTAGAACT
GCATATGTGTTGTGAAATTGTCTGTTTATTTTCTTGAAAAATAATGTAAA
TACTC
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