FC932067

Overview
NameFC932067
Unique NameFC932067
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length670
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC932067 vs. ExPASy Swiss-Prot
Match: TRM13_VANPO (tRNA guanosine-2'-O-methyltransferase TRM13 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=TRM13 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.546e-11
Identity = 40/134 (29.85%), Postives = 70/134 (52.24%), Query Frame = 3 
Query:   69 ENIMEETRCKFWLPKKNRFCSNARLNDSSLFCGNHNRRTDG-QWIPCPIDPSHSVLKENLDGHVKRCPLLKQVRSLSQQPFYHKGINAGKEDDEEELGAVTSTAVEDNVTSEMKRNAVHSMTVPEFCNLIKKIE 467
            E+  +  +C+F++ KK R C  +R N SS +C  H    +  + IPCP+DP+H+V + +LD H+K+C  LK +     +P++ K  NA   +D       T+   +D++ + + +      T+P   N  K  E
Sbjct:    4 ESKKQRLQCEFYMEKKKRRCGMSR-NLSSKYCSEHQILNENTKRIPCPLDPNHTVWESDLDSHLKKCNKLKLIHQHDNKPYFLKDCNAITTEDSN-----TTVITKDSLQNWIMK------TIPVLKNFFKDDE 125
The following BLAST results are available for this feature:
BLAST of FC932067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TRM13_VANPO1.546e-1129.85tRNA guanosine-2'-O-methyltransferase TRM13 OS=Van... [more]
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Properties
Property NameValue
Genbank descriptionC34204C08EF PostHarveN Citrus clementina cDNA clone C34204C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932067 ID=FC932067; Name=FC932067; organism=Citrus clementina; type=EST; length=670bp
GTCCGCCGCCTGCCGCAGCCACTGGTAACTGGAACCGCGGGGCTAACTCC
ACTGCAACAGTTGCTGCCGAAAACATAATGGAGGAGACTCGCTGCAAATT
CTGGCTTCCCAAGAAGAACAGATTCTGTTCAAATGCTCGTCTCAACGATT
CTTCTTTGTTCTGTGGCAATCATAATCGGAGGACCGATGGTCAGTGGATT
CCATGCCCAATTGACCCTTCCCATTCTGTTCTTAAAGAAAACCTCGATGG
ACATGTCAAGAGATGCCCTCTATTGAAACAAGTTCGGTCTTTAAGTCAGC
AACCATTTTATCATAAGGGCATTAATGCTGGCAAAGAAGATGATGAAGAA
GAATTGGGTGCAGTCACATCCACAGCAGTTGAAGATAATGTGACCTCTGA
AATGAAGAGGAATGCTGTTCACAGCATGACTGTGCCCGAATTCTGTAATT
TGATTAAGAAGATTGAATCGGTTCATGCTCTAATATGTAATGGTATTTGT
GACTCGTTTAAGATTCCAGAAGCTTGTGGTATGTGGATTAAGAGAGAAAT
AGACAGGAGAAACATGTTACGCAACAGGCATCAATCCTTGGGAACTTGGA
AGAATTTGGGGTGTTGAAGAACTCTGTTGGAGTGAATCANGATGATGAGA
AGGCTGCACCAGCTGTGGTT
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