FC932069

Overview
NameFC932069
Unique NameFC932069
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig724 contig Ccv1_Contig724:134..829. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932069 vs. ExPASy Swiss-Prot
Match: YJX4_SCHPO (CRAL-TRIO domain-containing protein C23B6.04c OS=Schizosaccharomyces pombe GN=SPCC23B6.04c PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.011e-24
Identity = 75/212 (35.38%), Postives = 108/212 (50.94%), Query Frame = 2
Query:   74 KNNTQESEEYHHES-----KVKELKAAIGPLYGRSL-----QYCSDACLKRYLEARNWNVDKAKKMLEETLKWRSTYRPEEIRWNEIAVEGETGKLFRAGFRDRHGRTVLILRPGMQNTASIDNQMRHLVYLIENAILNLPEGQEQMAWLIDFTGWSLSTSVPIRSARETINILQNHYPERLAIAFLYNPPRIFEAFWKVVKYFLDAETFPK 679
            +N T E EE + E      ++KE+  A        L      + +  C+ RYL A  W+V  AKK + +TL WR  +    +  +EI  E  TGK    G+ D+ GR  L L P  QNT +   Q+RHLV+ +E AI  +P G E +A LI+F   S  ++  +   +E +NILQ HY ERL  A + N P     F+K++  F+D  T  K
Sbjct:  590 RNLTSEQEEMYEEVLKYCLELKEIPVASNSSKKTDLIELERLWLTRECILRYLRATKWHVSNAKKRIVDTLVWRRHFGVNNMDPDEIQEENATGKQVLLGY-DKDGRPCLYLYPARQNTKTSPLQIRHLVFSLECAIDLMPPGVETLALLINFKSSSNRSNPSVGQGKEVLNILQTHYCERLGRALVINIPWAVWGFFKLISPFIDPITREK 800          
BLAST of FC932069 vs. ExPASy Swiss-Prot
Match: PDR17_YEAST (Phosphatidylinositol transfer protein PDR17 OS=Saccharomyces cerevisiae GN=PDR17 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.594e-22
Identity = 69/182 (37.91%), Postives = 96/182 (52.75%), Query Frame = 2
Query:  170 YCSDACLKRYLEARNWNVDKAKKMLEETLKWRS----TYRPEE---IRWNEIAVEGETGKLFRAGFRDRHGRTVLILRPGMQNTASIDNQMRHLVYLIENAILNLPEGQEQMAWLIDFTGWS-----LSTSVPIRSARETINILQNHYPERLAIAFLYNPPRIFEAFWKVVKYFLDAETFPK 679
            + S  C  RYL A  WN   A K L +TL WR     T+  E+   +  +++AVE ETGK    GF D   R +  ++ G QNT S   Q++ LVY++E A    P+G E++  L+DF  +         + PI  AR  +N++Q+HYPERLA   L N P    AF K++  FLD  T  K
Sbjct:   89 WLSRECFLRYLRANKWNTANAIKGLTKTLVWRREIGLTHGKEDKDPLTADKVAVENETGKQVILGF-DNAKRPLYYMKNGRQNTESSFRQVQELVYMMETATTVAPQGVEKITVLVDFKSYKEPGIITDKAPPISIARMCLNVMQDHYPERLAKCVLINIPWFAWAFLKMMYPFLDPATKAK 269          
BLAST of FC932069 vs. ExPASy Swiss-Prot
Match: RSC5_DICDI (Random slug protein 5 OS=Dictyostelium discoideum GN=rsc5 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.046e-21
Identity = 58/192 (30.21%), Postives = 110/192 (57.29%), Query Frame = 2
Query:  122 KELKAAIGPLYGRS-LQYCSDACLKRYLEARNWNVDKAKKMLEETLKWRSTYRPEEIR-WNEIAVEGETGKLFRAGFRDRHGRTVLILRPGMQNTASIDNQM--RHLVYLIENAI--LNLPEGQEQMAWLIDFTGWSLSTSVPIRSARETINILQNHYPERLAIAFLYNPPRIFEAFWKVVKYFLDAETFPK 679
            KE+K+    L   + + +C+D C  RYL ARN+ V K++KML +TL+WR  +RP++I+   +I   G  G ++    RD+ GR ++   P      ++ +++  ++LVY +E     ++ P+G EQ  +++D+  +  S ++ +++  E ++ L +H PER+  +   +PP +F   WK++  FL+  T  K
Sbjct:   53 KEIKSNFSDLTDPTDIAFCTDMCFLRYLRARNYIVSKSEKMLRDTLEWRKKFRPQDIQLGGDIREIGSAGCVY-VNKRDKKGRPIIFAVPRNDTLKNVPSELKFKNLVYWLEQGFSRMDEPKGIEQFCFIVDYKDFG-SGNMDMKTNLEAMHFLLDHCPERMGQSLFLDPPALFWFAWKIISPFLNEVTLSK 242          
BLAST of FC932069 vs. ExPASy Swiss-Prot
Match: PDR16_YEAST (Phosphatidylinositol transfer protein PDR16 OS=Saccharomyces cerevisiae GN=PDR16 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.330e-21
Identity = 72/238 (30.25%), Postives = 114/238 (47.90%), Query Frame = 2
Query:   53 SVAMFRKKNNTQESEEYHHE--------------SKVKELKAAIGPLYGRSLQYCSDACLKRYLEARNWNVDKAKKMLEETLKWRSTY--------RPEEIRWNEIAVEGETGKLFRAGFRDRHGRTVLILRPGMQNTASIDNQMRHLVYLIENAILNLPEGQEQMAWLIDFTGW-------SLSTSVPIRSARETINILQNHYPERLAIAFLYNPPRIFEAFWKVVKYFLDAETFPK 679
            S+A+ ++K  T E ++ + E              S+  + +  + PL      + +  C  RYL A  W +      +  TL WR  +          ++I  + +AVE E+GK    G+ +   R +L L+PG QNT +   Q++HLV+++E  I  +P GQ+ +A LIDF  +         S   PI   +E ++ILQ HYPERL  A L N P +   F K++  F+D  T  K
Sbjct:   31 SIAIPKEKPLTGEQQKMYDEVLKHFSNPDLKVYTSEKNKSEDDLKPLEEEEKAWLTRECFLRYLRATKWVLKDCIDRITMTLAWRREFGISHLGEEHGDKITADLVAVENESGKQVILGY-ENDARPILYLKPGRQNTKTSHRQVQHLVFMLERVIDFMPAGQDSLALLIDFKDYPDVPKVPGNSKIPPIGVGKEVLHILQTHYPERLGKALLTNIPWLAWTFLKLIHPFIDPLTREK 267          
BLAST of FC932069 vs. ExPASy Swiss-Prot
Match: CSR1_ASHGO (Phosphatidylinositol transfer protein CSR1 OS=Ashbya gossypii GN=CSR1 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.159e-12
Identity = 56/197 (28.43%), Postives = 96/197 (48.73%), Query Frame = 2
Query:  119 VKELKAAIGPLYGRSLQYCS--DACLKRYLEARNWNVDKAKKMLEETLKWR-STYRPEEIRWNE-----------IAVEGETGKLFRAGFRDRHGRTVLILRPGMQNTASIDNQ--MRHLVYLIENAILNLPEGQEQMAWLIDFTGWSLSTSVPIRSARETINILQNHYPERLAIAFLYNPPRIFEAFWKVVKYFLD 661
            +KEL  A       S+  C   D  L R++ AR W+++KA  M+  +L+WR +  +PE+I +             I  + E GK    GF D++G  ++ +RP + + A         + +++IE A L L E  +    L D +G+S++ ++     +  I   + HYPE L   F++  P IF   W ++K +LD
Sbjct:  116 LKELDGAAVSKEFWSMLRCDYPDNLLLRFVRARKWDINKAMIMMAHSLRWRLNEGKPEDIVFGGERGAQKADKKGIVKQLELGKATVRGF-DKNGCPIVYVRPRLHHAADQTEAETSEYSLFIIEQARLFLKEPCDTATILFDLSGFSMA-NMDYAPVKFLITCFEAHYPECLGKLFIHKAPWIFPPIWNIIKNWLD 310          
BLAST of FC932069 vs. ExPASy Swiss-Prot
Match: RETM_AEDAE (Protein real-time OS=Aedes aegypti GN=retm PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.404e-12
Identity = 58/225 (25.78%), Postives = 100/225 (44.44%), Query Frame = 2
Query:   56 VAMFRKKNNTQESEEYHHESKVKELKAAIGPLYGRSLQYCSDACLKRYLEARNWNVDKAKKMLEETLKWRSTYRPEEIRWNEIAVEGETGKLFRAGF--RDRHGRTVLILR------PGMQNTASIDNQMRHLVYLIENAILNLPE-----GQEQMAW--LIDFTGWSLS--TSVPIRSARETINILQNHYPERLAIAFLYNPPRIFEAFWKVVKYFLDAETFPK 679
            +  FRKK      EE +HE KV + +                  L R+L AR+++++KA  ML+E+L+WR  +R ++I   E        K F  G+   D+ GR + ILR       G+  +   D  ++  +++ E  +  + E     G+    W  L+D  G S+       +++    I  ++ +YPE +    +   PR+F   W +V  F+D  T  K
Sbjct:  233 LVQFRKK-----IEETNHEGKVPDYQT-----------------LLRFLRARDFSIEKAASMLQESLQWREEHRIDDI-LGEYKTPVVVEKYFPGGWHHHDKDGRPLYILRLGNMDVKGLLKSVGEDELLKLTLHICEEGLKLMKEATKLFGKPIWNWCLLVDLDGLSMRHLWRPGVKALLRIIETVEKNYPETMGRVLIVRAPRVFPVLWTIVSAFIDENTRSK 434          
BLAST of FC932069 vs. ExPASy Swiss-Prot
Match: YAS2_SCHPO (CRAL-TRIO domain-containing protein C3H8.02 OS=Schizosaccharomyces pombe GN=SPAC3H8.02 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.186e-11
Identity = 50/176 (28.41%), Postives = 80/176 (45.45%), Query Frame = 2
Query:  179 DACLKRYLEARNWNVDKAKKMLEETLKWRSTYRPEEIRWNEIAVEGE-------------TGKLFRAGFRDRHGRTVLILRPGMQNTASI--DNQMRHLVYLIENAILNLPEGQEQMAWLIDFTGWSLSTSVPIRSARETINILQNHYPERLAIAFLYNPPRIFEAFWKVVKYFLD 661
            D  L R+L AR WNV+ A +M  +T+ WRS     E+   EI    +              GK F  G  D+H R V  +R  +     +  ++  R  V+++E A L L    E    + D T +S+S ++     +  I   + HYPE L    ++  P +F+  W ++K +LD
Sbjct:  124 DGLLLRFLRARKWNVEAALEMFMKTVHWRS----REMNVGEIVCNADHLDKDDDFVRQLRIGKCFIFG-EDKHNRPVCYIRARLHKVGDVSPESVERLTVWVMETARLILKPPIETATVVFDMTDFSMS-NMDYGPLKFMIKCFEAHYPECLGECIVHKAPWLFQGVWSIIKSWLD 293          
BLAST of FC932069 vs. ExPASy Swiss-Prot
Match: RETM_ANOGA (Protein real-time OS=Anopheles gambiae GN=retm PE=3 SV=4)

HSP 1 Score: 69.3218 bits (168), Expect = 2.186e-11
Identity = 49/181 (27.07%), Postives = 84/181 (46.41%), Query Frame = 2
Query:  188 LKRYLEARNWNVDKAKKMLEETLKWRSTYRPEEIRWNEIAVEGETGKLFRAGF--RDRHGRTVLILRPGMQNTASI------DNQMRHLVYLIENAILNLPE-----GQEQMAW--LIDFTGWSLS--TSVPIRSARETINILQNHYPERLAIAFLYNPPRIFEAFWKVVKYFLDAETFPK 679
            L R+L AR++++DKA  ML+E+L+WR   R + I   E        K F  G+   D+ GR + ILR G  +   +      D  ++  +++ E  +  + E     G+    W  L+D  G S+       +++    I  ++ +YPE +    +   PR+F   W +V  F+D  T  K
Sbjct:  258 LLRFLRARDFSIDKATGMLQESLQWRKEQRIDSI-LGEYKTPAVVEKYFPGGWHHHDKDGRPLYILRLGTMDVKGLLKSVGEDELLKLTLHICEEGLRLMKEATKLFGKPVWNWCLLVDLDGLSMRHLWRPGVKALLRIIETVETNYPETMGRVLIVRAPRVFPVLWTIVSTFIDENTRSK 437          
BLAST of FC932069 vs. ExPASy Swiss-Prot
Match: RETM_DROME (Protein real-time OS=Drosophila melanogaster GN=retm PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 8.306e-11
Identity = 51/181 (28.18%), Postives = 88/181 (48.62%), Query Frame = 2
Query:  194 RYLEARNWNVDKAKKMLEETLKWRSTYRPEEI--RWNEIAVEGETGKLFRAGFR--DRHGRTVLILR------PGMQNTASIDNQMRHLVYLIENAILNLPEGQEQMA-----W--LIDFTGWSLST--SVPIRSARETINILQNHYPERLAIAFLYNPPRIFEAFWKVVKYFLDAETFPK 679
            R+L AR+W+V +A  ML ++L+WR  +R + +   +++ AV  E    F  G+   D+ GR V ILR       G+  +  +D  +R  +++ E  I  + E  E++      W  L+D  G S+       I++    I  ++ +YPE +    +   PR+F   W +V  F+D  T  K
Sbjct:  249 RFLAARDWHVSQAYAMLCDSLRWRREHRIDALLAEYSKPAVVVEH---FPGGWHHLDKDGRPVYILRLGHMDVKGLLKSLGMDGLLRLALHICEEGIQKINESAERLEKPVLNWSLLVDLEGLSMRHLWRPGIKALLNIIETVERNYPETMGRVLVVRAPRVFPIAWTIVSAFIDEHTRSK 426          
The following BLAST results are available for this feature:
BLAST of FC932069 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
YJX4_SCHPO1.011e-2435.38CRAL-TRIO domain-containing protein C23B6.04c OS=S... [more]
PDR17_YEAST3.594e-2237.91Phosphatidylinositol transfer protein PDR17 OS=Sac... [more]
RSC5_DICDI1.046e-2130.21Random slug protein 5 OS=Dictyostelium discoideum ... [more]
PDR16_YEAST2.330e-2130.25Phosphatidylinositol transfer protein PDR16 OS=Sac... [more]
CSR1_ASHGO1.159e-1228.43Phosphatidylinositol transfer protein CSR1 OS=Ashb... [more]
RETM_AEDAE4.404e-1225.78Protein real-time OS=Aedes aegypti GN=retm PE=3 SV... [more]
YAS2_SCHPO2.186e-1128.41CRAL-TRIO domain-containing protein C3H8.02 OS=Sch... [more]
RETM_ANOGA2.186e-1127.07Protein real-time OS=Anopheles gambiae GN=retm PE=... [more]
RETM_DROME8.306e-1128.18Protein real-time OS=Drosophila melanogaster GN=re... [more]
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Properties
Property NameValue
Genbank descriptionC34204C10EF PostHarveN Citrus clementina cDNA clone C34204C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932069 ID=FC932069; Name=FC932069; organism=Citrus clementina; type=EST; length=696bp
GACGGTGTTTCTATCTCCTTCCCCAGGTTGACTCGATTGCTAAATTGTGG
GATCAGTTGCCATGTTTCGCAAGAAGAATAACACTCAGGAGAGTGAGGAG
TACCATCATGAGTCAAAGGTCAAGGAGCTTAAGGCTGCGATCGGACCACT
TTATGGACGTAGTTTGCAGTATTGCTCTGATGCATGCTTGAAGAGATATC
TGGAGGCTCGAAACTGGAATGTGGACAAAGCAAAGAAAATGTTGGAAGAG
ACACTCAAATGGAGGTCAACCTACAGGCCGGAGGAAATCCGTTGGAATGA
AATTGCAGTTGAAGGTGAGACCGGAAAGTTATTTAGAGCTGGTTTTCGTG
ACCGACATGGCAGGACTGTTCTCATATTGAGACCCGGAATGCAGAACACT
GCATCAATAGACAATCAGATGAGACACCTAGTCTATCTCATAGAGAATGC
TATCCTAAACCTTCCAGAGGGTCAGGAACAAATGGCATGGTTAATAGACT
TCACTGGGTGGTCATTGAGCACCAGCGTCCCTATCAGGTCTGCTCGAGAA
ACTATCAATATATTACAAAATCACTACCCTGAAAGGCTGGCCATAGCATT
TCTCTACAATCCCCCACGGATTTTTGAAGCATTTTGGAAGGTTGTCAAGT
ATTTCTTGGATGCCGAAACATTCCCAAAGTGAAATTTGTATATCCA
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