FC932074

Overview
NameFC932074
Unique NameFC932074
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length732
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10291 contig Ccv1_Contig10291:265..996. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932074 vs. ExPASy Swiss-Prot
Match: VTC4_ARATH (Inositol-phosphate phosphatase OS=Arabidopsis thaliana GN=VTC4 PE=1 SV=1)

HSP 1 Score: 395.201 bits (1014), Expect = 1.893e-109
Identity = 186/228 (81.58%), Postives = 210/228 (92.11%), Query Frame = 2
Query:   47 MAQNDSLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDVAAGVVI 730
            MA NDSL +FL  A+DAAK+AG+IIR GFY+TK+VEHKGQVDLVTETDK CE+L+FNHLKQ FP HKFIGEETTAA G TELTDEPTWIVDPLDGTTNFVHGFPFVC+SIGLTIGK+P+VGVVYNPIM+ELFTGV G+GAF NGK IKVS+Q+EL+ +LL TEAGTKRDK TLD +TNRINSLL KVRSLRMSGSCAL+LCG+ACGR+D+FYELGFGGPWD+AAG+VI
Sbjct:    1 MADNDSLDQFLAAAIDAAKKAGQIIRKGFYETKHVEHKGQVDLVTETDKGCEELVFNHLKQLFPNHKFIGEETTAAFGVTELTDEPTWIVDPLDGTTNFVHGFPFVCVSIGLTIGKVPVVGVVYNPIMEELFTGVQGKGAFLNGKRIKVSAQSELLTALLVTEAGTKRDKATLDDTTNRINSLLTKVRSLRMSGSCALDLCGVACGRVDIFYELGFGGPWDIAAGIVI 228          
BLAST of FC932074 vs. ExPASy Swiss-Prot
Match: IMP3_SOLLC (Inositol monophosphatase 3 OS=Solanum lycopersicum GN=IMP3 PE=2 SV=1)

HSP 1 Score: 394.43 bits (1012), Expect = 3.229e-109
Identity = 190/228 (83.33%), Postives = 207/228 (90.79%), Query Frame = 2
Query:   47 MAQNDSLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDVAAGVVI 730
            MAQN S+ +FLD AV+AAK+AGEIIR GFY+TK+VEHKG VDLVTETDKACED IFNHLKQ+FP+HKFIGEETTAACG  ELTDEPTWIVDPLDGTTNFVHGFPFVC+SIGLTI K P VGVVYNPI+DELFTG+ G+GAF NGKPIKVSSQ+ELVK+LLATEAGT RDK  +DA+T RINSLLFKVRSLRM GSCALNLCG+ACGRLDLFYEL FGGPWDVA G VI
Sbjct:    1 MAQNGSVEQFLDVAVEAAKKAGEIIREGFYKTKHVEHKGMVDLVTETDKACEDFIFNHLKQRFPSHKFIGEETTAACGNFELTDEPTWIVDPLDGTTNFVHGFPFVCVSIGLTIEKKPTVGVVYNPIIDELFTGIDGKGAFLNGKPIKVSSQSELVKALLATEAGTNRDKLVVDATTGRINSLLFKVRSLRMCGSCALNLCGVACGRLDLFYELEFGGPWDVAGGAVI 228          
BLAST of FC932074 vs. ExPASy Swiss-Prot
Match: IMPP_MESCR (Inositol monophosphatase OS=Mesembryanthemum crystallinum GN=IMP1 PE=2 SV=1)

HSP 1 Score: 376.326 bits (965), Expect = 9.100e-104
Identity = 183/228 (80.26%), Postives = 199/228 (87.28%), Query Frame = 2
Query:   47 MAQNDSLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDVAAGVVI 730
            MA N  L+ FL TAVDAAKRAGE+IR GFY  KNVEHKGQVDLVTETDK+CED+IFN LKQQ+P HKFIGEETTAA GATELTDEPTWIVDPLDGTTNFVHGFPFVC+SIGLTIGK+P VGVVYNPIM+ELFTGV  QGAF NG PI VSS+ ELV  LL TE GTKRDK T+DA+TNRIN LLFKVRS+RM+GSCAL+LCGIACGR DL YE G+GG WDV AG+VI
Sbjct:    1 MAANVPLSDFLATAVDAAKRAGEVIRKGFYVKKNVEHKGQVDLVTETDKSCEDIIFNCLKQQYPNHKFIGEETTAAYGATELTDEPTWIVDPLDGTTNFVHGFPFVCVSIGLTIGKVPTVGVVYNPIMNELFTGVRRQGAFLNGVPIHVSSKDELVNCLLVTEVGTKRDKSTVDATTNRINGLLFKVRSIRMAGSCALDLCGIACGRADLMYENGYGGAWDVTAGIVI 228          
BLAST of FC932074 vs. ExPASy Swiss-Prot
Match: IMP1_SOLLC (Inositol monophosphatase 1 OS=Solanum lycopersicum GN=IMP1 PE=2 SV=1)

HSP 1 Score: 370.548 bits (950), Expect = 4.993e-102
Identity = 177/228 (77.63%), Postives = 203/228 (89.04%), Query Frame = 2
Query:   47 MAQNDSLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDVAAGVVI 730
            MA+N SL +FL  AVDAAKRAGEIIR GF++TK+V HKGQVDLVTETDKACEDLIFNHLKQ FP+HKFIGEET+AA G  +LTDEPTWIVDP+DGTTNFVHGFP VC+SIGLTIGKIP VGVVY+PI+DELFTG++G+GA+ NGKPIKVSSQ+ELVKSLL TE GT RD  T++ +T RIN+LLFKVRSLRM GSCAL+LC +ACGRL+LFY +G+GGPWDVA G VI
Sbjct:    1 MARNGSLEEFLGVAVDAAKRAGEIIRKGFHETKHVVHKGQVDLVTETDKACEDLIFNHLKQHFPSHKFIGEETSAATGDFDLTDEPTWIVDPVDGTTNFVHGFPSVCVSIGLTIGKIPTVGVVYDPIIDELFTGINGKGAYLNGKPIKVSSQSELVKSLLGTEVGTTRDNLTVETTTRRINNLLFKVRSLRMCGSCALDLCWVACGRLELFYLIGYGGPWDVAGGAVI 228          
BLAST of FC932074 vs. ExPASy Swiss-Prot
Match: IMP2_SOLLC (Inositol monophosphatase 2 OS=Solanum lycopersicum GN=IMP2 PE=2 SV=1)

HSP 1 Score: 359.762 bits (922), Expect = 8.814e-99
Identity = 170/223 (76.23%), Postives = 201/223 (90.13%), Query Frame = 2
Query:   65 LAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAAC-GATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDVAAGVVI 730
            + +F+D A++AAK+AGEIIR+GFY++K++EHKG VDLVTETDKACE LIFNHLKQ FP+HKFIGEETTAA  G  ELTDEPTWIVDPLDGTTNFVHGFPFVC+SIGLTI K P+VGVVYNPI+DELFT ++G+GAF NGK I+VSS+++LVK+L+ATE GT RDK  +DA+T RIN ++FKVRSLRMSGSCALNLCG+ACGRLDLFYE+ FGGPWDVAAG +I
Sbjct:    1 MEEFVDVAIEAAKKAGEIIRHGFYKSKHIEHKGVVDLVTETDKACEVLIFNHLKQCFPSHKFIGEETTAAASGNFELTDEPTWIVDPLDGTTNFVHGFPFVCVSIGLTIEKKPVVGVVYNPIIDELFTAIYGRGAFLNGKSIRVSSESQLVKALVATEVGTNRDKAIVDATTGRINRVIFKVRSLRMSGSCALNLCGVACGRLDLFYEIEFGGPWDVAAGALI 223          
BLAST of FC932074 vs. ExPASy Swiss-Prot
Match: IMPA1_BOVIN (Inositol monophosphatase 1 OS=Bos taurus GN=IMPA1 PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.179e-48
Identity = 99/227 (43.61%), Postives = 144/227 (63.44%), Query Frame = 2
Query:   59 DSLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQ-VDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLL-FKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDVA-AGVVI 730
            D   + +D AV  A +AGE++R       N+  K    DLVT TD+  E ++   +K+++P+H FIGEE+ AA   + LTD PTWI+DP+DGTTNFVHGFPFV +SIG  + K    G+VY+ + D+++TG  G+GAF NG+ ++VS Q ++ KSLL TE G+ R   T+    + I  LL   +  +R  G+ ALN+C +A G  D +YE+G    WDVA AG+++
Sbjct:    3 DPWQECMDYAVTLAGQAGEVVREALKNEMNIMVKSSPADLVTATDQKVEKMLITSIKEKYPSHSFIGEESVAAGEKSILTDNPTWIIDPIDGTTNFVHGFPFVAVSIGFVVNKKMEFGIVYSCLEDKMYTGRKGKGAFCNGQKLQVSHQEDITKSLLVTELGSSRTPETVRIILSNIERLLCLPIHGIRGVGTAALNMCLVAAGAADAYYEMGI-HCWDVAGAGIIV 228          
BLAST of FC932074 vs. ExPASy Swiss-Prot
Match: IMPA1_DICDI (Inositol monophosphatase OS=Dictyostelium discoideum GN=impa1 PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 7.082e-48
Identity = 102/228 (44.74%), Postives = 145/228 (63.60%), Query Frame = 2
Query:   53 QNDSLAKFLDTAVDAAKRAGE-IIRNGFYQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKR-DKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDVAAGVVI 730
            +N +L ++L +AVD  K  G  I++N   ++K +E+KG +DLVT+TDKA E+ I   L  ++P  K +GEE+T   G     +EPTW++DP+DGTTNFVH FP  C+SI L+I K  +V  +Y P++DELFT   G GAF NG+ I VSS   L +S+++T  G  R DK      TN  N L   V++LR SG+ A  +  ++CGR+D FYE G   PWD+AA  ++
Sbjct:    2 ENITLDQYLQSAVDVVKEIGPMILKNYNSRSKQIEYKGAIDLVTDTDKAVEEHIIKTLTTKYPHTKILGEESTKD-GIYNWGNEPTWVIDPIDGTTNFVHRFPLFCVSIALSINKEIVVACLYAPVLDELFTATKGGGAFLNGESISVSSVEHLSQSIISTNVGYDRSDKGIEFMLTNFKNILKDNVQALRFSGTAAWEMASVSCGRVDSFYEWGI-HPWDIAAASLL 227          
BLAST of FC932074 vs. ExPASy Swiss-Prot
Match: IMPA1_PIG (Inositol monophosphatase 1 OS=Sus scrofa GN=IMPA1 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.515e-47
Identity = 98/227 (43.17%), Postives = 145/227 (63.88%), Query Frame = 2
Query:   59 DSLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQ-VDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLL-FKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDVA-AGVVI 730
            D   + +D AV  A++AGEI+R       N+  K    DLVT TD+  E ++ + +K+++P+H FIGEE+ AA   + LTD PTWI+DP+DGTTNFVHGFPFV +SIG  + K    GVVY+ + D+++TG  G+GAF +G+ ++VS Q ++  SLL TE G+ R   T+    + +  LL   +  +R  G+ ALN+C +A G  D FYE+G    WD+A AG+++
Sbjct:    3 DPWQECMDYAVTLARQAGEIVREALKNEMNIMIKSSPADLVTATDEKVEKMLISSIKEKYPSHSFIGEESVAAGEKSVLTDNPTWIIDPIDGTTNFVHGFPFVAVSIGFVVNKGMEFGVVYSCMEDKMYTGRKGRGAFCDGQKLQVSPQKDVTNSLLVTELGSSRTPETVRIILSNMERLLCIPIHGIRGVGTAALNMCFVAAGVADAFYEMGI-HCWDMAGAGIIV 228          
BLAST of FC932074 vs. ExPASy Swiss-Prot
Match: IMPA2_RAT (Inositol monophosphatase 2 OS=Rattus norvegicus GN=Impa2 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.628e-46
Identity = 100/219 (45.66%), Postives = 136/219 (62.10%), Query Frame = 2
Query:   80 DTAVDAAKRAGEIIRNGFYQTKNVEHK-GQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLF-KVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDVAAGVVI 730
            + AV  A RAG+IIR    + K+V  K    DLVTETD   EDLI + L+++FP+H+FI EE TA+     LT  PTWI+DP+DGT NFVH FP V +SIG  + +    GV+++   + L+TG  GQGAF NG+ ++VS +T+L K+L+ TE G KRD  TL    + +  LL  K   +R+ GS  L LC +A G  D +Y+ G    WD+AA  VI
Sbjct:   23 EVAVQLALRAGQIIRKALTEEKHVSTKTSAADLVTETDHRVEDLIVSELRKRFPSHRFIAEEATASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVHQELEFGVIHHCTEERLYTGRRGQGAFCNGQRLQVSRETDLAKALVLTEIGPKRDPDTLKVFLSNMERLLHAKAHGVRVIGSSTLALCYLASGAADAYYQFGL-HCWDLAAATVI 240          
BLAST of FC932074 vs. ExPASy Swiss-Prot
Match: IMPA2_MOUSE (Inositol monophosphatase 2 OS=Mus musculus GN=Impa2 PE=1 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.657e-46
Identity = 100/219 (45.66%), Postives = 135/219 (61.64%), Query Frame = 2
Query:   80 DTAVDAAKRAGEIIRNGFYQTKNVEHK-GQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLF-KVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDVAAGVVI 730
            + AV  A RAG+IIR    + K V  K    DLVTETD   EDLI + L+++FP+H+FI EE TA+     LT  PTWI+DP+DGT NFVH FP V +SIG  + +    GV+++   + L+TG  GQGAF NG+ ++VS +T+L K+L+ TE G KRD  TL    + +  LL  K   +R+ GS  L LC +A G  D +Y+ G    WD+AA  VI
Sbjct:   23 EVAVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHRVEDLIVSELRKRFPSHRFIAEEATASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVHQELEFGVIHHCTEERLYTGRRGQGAFCNGQRLQVSRETDLAKALVLTEIGPKRDPDTLKVFLSNMERLLHAKAHGVRVIGSSTLALCYLASGAADAYYQFGL-HCWDLAAATVI 240          
The following BLAST results are available for this feature:
BLAST of FC932074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
VTC4_ARATH1.893e-10981.58Inositol-phosphate phosphatase OS=Arabidopsis thal... [more]
IMP3_SOLLC3.229e-10983.33Inositol monophosphatase 3 OS=Solanum lycopersicum... [more]
IMPP_MESCR9.100e-10480.26Inositol monophosphatase OS=Mesembryanthemum cryst... [more]
IMP1_SOLLC4.993e-10277.63Inositol monophosphatase 1 OS=Solanum lycopersicum... [more]
IMP2_SOLLC8.814e-9976.23Inositol monophosphatase 2 OS=Solanum lycopersicum... [more]
IMPA1_BOVIN3.179e-4843.61Inositol monophosphatase 1 OS=Bos taurus GN=IMPA1 ... [more]
IMPA1_DICDI7.082e-4844.74Inositol monophosphatase OS=Dictyostelium discoide... [more]
IMPA1_PIG3.515e-4743.17Inositol monophosphatase 1 OS=Sus scrofa GN=IMPA1 ... [more]
IMPA2_RAT6.628e-4645.66Inositol monophosphatase 2 OS=Rattus norvegicus GN... [more]
IMPA2_MOUSE8.657e-4645.66Inositol monophosphatase 2 OS=Mus musculus GN=Impa... [more]

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Properties
Property NameValue
Genbank descriptionC34204D03EF PostHarveN Citrus clementina cDNA clone C34204D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932074 ID=FC932074; Name=FC932074; organism=Citrus clementina; type=EST; length=732bp
GCTTCTCTTTAATTTTTTAATCCTGTATAATAAAAAATATACCCATATGG
CACAAAATGATTCGCTTGCAAAGTTCTTGGACACTGCAGTTGATGCAGCT
AAGAGGGCTGGCGAGATAATCCGTAATGGGTTCTATCAAACCAAAAATGT
GGAGCATAAAGGCCAGGTGGATTTGGTCACAGAAACTGATAAAGCATGTG
AGGATCTCATATTTAATCATCTCAAGCAGCAATTTCCCACGCATAAGTTC
ATTGGAGAAGAAACTACCGCTGCTTGTGGTGCCACAGAGTTGACCGATGA
ACCCACATGGATTGTCGATCCTCTTGATGGAACAACTAACTTTGTGCATG
GGTTTCCCTTTGTGTGTATCTCTATCGGTCTTACAATTGGAAAGATTCCT
ATTGTCGGGGTTGTCTACAATCCAATAATGGATGAGCTTTTTACTGGAGT
CCATGGACAAGGTGCATTTTTTAATGGAAAACCTATAAAAGTATCATCTC
AAACTGAACTAGTAAAGTCTCTCCTCGCAACAGAGGCTGGAACAAAACGT
GATAAGCCAACTCTGGATGCTTCTACAAATAGAATCAATAGCTTGCTATT
CAAGGTGAGATCCCTTCGGATGAGTGGCTCCTGTGCATTGAATCTTTGTG
GAATTGCATGCGGAAGGCTTGATCTGTTTTATGAACTCGGATTTGGAGGT
CCATGGGATGTGGCAGCTGGTGTTGTGATTGT
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