FC932080
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932080 vs. ExPASy Swiss-Prot
Match: RBP1C_ARATH (Ran-binding protein 1 homolog c OS=Arabidopsis thaliana GN=RANBP1C PE=2 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 3.205e-68 Identity = 125/157 (79.62%), Postives = 141/157 (89.81%), Query Frame = 3 Query: 216 MASTT-EGDHREEEVPHNEDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSVENCKSFMEMVHEXAE 683 MAST E ++RE+E NEDEDTGAQVAPIV+LEEVAVTTGEEDEDA+LDLK+K+YRFDK+GNQWKERGAGTVKLLKHK TGKVRLVMRQSKTLKICANHL+ MSVQEH+GN+KSC+WHA D++DGELKDELFCIRF S+ENCK+FME E AE Sbjct: 1 MASTEPERENREDETEVNEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKMYRFDKEGNQWKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLWHATDFSDGELKDELFCIRFASIENCKTFMEKFTEIAE 157
BLAST of FC932080 vs. ExPASy Swiss-Prot
Match: RBP1B_ARATH (Ran-binding protein 1 homolog b OS=Arabidopsis thaliana GN=RANBP1B PE=1 SV=2) HSP 1 Score: 253.062 bits (645), Expect = 1.031e-66 Identity = 124/158 (78.48%), Postives = 140/158 (88.61%), Query Frame = 3 Query: 213 AMASTTEGDHR-EEEVPHNEDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSVENCKSFMEMVHEXAE 683 ++++ E ++R EEE NEDEDTGAQVAPIV+LEEVAVTTGEEDED ILDLK+KLYRFDKDG+QWKERGAGTVK LKH+V+GK+RLVMRQSKTLKICANHLV MSVQEHAGNDKSCVWHA D++DGELKDELFCIRF SVENCK+FM+ E AE Sbjct: 3 SISNEPERENRDEEETGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDTILDLKSKLYRFDKDGSQWKERGAGTVKFLKHRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWHARDFSDGELKDELFCIRFASVENCKAFMQKFKEVAE 160
BLAST of FC932080 vs. ExPASy Swiss-Prot
Match: RBP1A_ARATH (Ran-binding protein 1 homolog a OS=Arabidopsis thaliana GN=RANBP1A PE=1 SV=1) HSP 1 Score: 252.677 bits (644), Expect = 1.347e-66 Identity = 123/152 (80.92%), Postives = 133/152 (87.50%), Query Frame = 3 Query: 231 EGDHR-EEEVPHNEDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSVENCKSFMEMVHEXAE 683 E +HR EEE NEDEDTGAQVAPIV+LEEVAVTTGEEDEDA+LDLK+KLYRFDKD NQWKERGAGTVK LKHK TGK+RLVMRQSKTLKICANH V MSVQEH GN+KSCVWHA D+ADGELKDELFCIRF S+ENCK+FM+ E AE Sbjct: 7 EHEHRDEEEAGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKLYRFDKDANQWKERGAGTVKFLKHKNTGKIRLVMRQSKTLKICANHFVKSGMSVQEHVGNEKSCVWHARDFADGELKDELFCIRFASIENCKTFMQKFKEVAE 158
BLAST of FC932080 vs. ExPASy Swiss-Prot
Match: RANG_SCHPO (Ran-specific GTPase-activating protein 1 OS=Schizosaccharomyces pombe GN=sbp1 PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.170e-32 Identity = 77/180 (42.78%), Postives = 103/180 (57.22%), Query Frame = 3 Query: 162 TDRSHANESPGTGKKSEAMASTTEGDHREEEVPHNEDEDTG-----AQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWH-AADYADGELKDELFCIRFGSVENCKSFMEMVHEXAE 683 T+ + A G K+ ++T +E+ P DED PIVKL V T EE+E ++AKL+RFDK ++WKERG G +LLKHK TGK RLVMR+ KTLK+CANHL++P M + + G+D+S VW AAD ++GE E F IRF + EN F E + E Sbjct: 31 TEEAKAVFGDGVAKQENKSGASTN----DEKKPAEGDEDAEPASPEVHFEPIVKLSAVETKTNEEEETVEFKMRAKLFRFDKAASEWKERGTGDARLLKHKETGKTRLVMRRDKTLKVCANHLLMPEMKLTPNVGSDRSWVWTVAADVSEGEPTAETFAIRFANSENANLFKENFEKYQE 206
BLAST of FC932080 vs. ExPASy Swiss-Prot
Match: RBP2_MOUSE (E3 SUMO-protein ligase RANBP2 OS=Mus musculus GN=Ranbp2 PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.834e-32 Identity = 71/167 (42.51%), Postives = 99/167 (59.28%), Query Frame = 3 Query: 162 TDRSHANESPGTGKKSEAMASTTEGDHREEE-VPHNEDEDTGAQVAPIVKL-EEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSVENCKSF 656 +D A PG + A + H + H ++ED G P+V L +++ V TGEEDE+ +AKL+RFD + +WKERG G VK+L+HK +GK+RL+MR+ + LKICANH + P M + +AG+D+S VWHA DYAD K E IRF + E F Sbjct: 1122 SDDMFAFHGPGKSVFTTAASELANKSHETDGGSAHGDEEDDGPHFEPVVPLPDKIEVKTGEEDEEEFFCNRAKLFRFDGESKEWKERGIGNVKILRHKTSGKIRLLMRREQVLKICANHYISPDMKLTPNAGSDRSFVWHALDYADELPKPEQLAIRFKTPEEAALF 1288 HSP 2 Score: 123.635 bits (309), Expect = 9.435e-28 Identity = 65/158 (41.14%), Postives = 96/158 (60.76%), Query Frame = 3 Query: 195 TGKKSEAMASTTEG----DHREEEVPHNEDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSVENCKSF 656 TG +T++G D +E+V HNED PIV L EV V +GEEDE+ + +AKLYR+D+D +QWKERG G +K+L H + R++MR+ + K+CANH++ M ++ ++ + VW A+DYADGE K E +RF + E +SF Sbjct: 2709 TGAAVFGTQTTSKGGEDEDGSDEDVVHNED----IHFEPIVSLPEVEVKSGEEDEEVLFKERAKLYRWDRDVSQWKERGIGDIKILWHTMKKYYRILMRRDQVFKVCANHVITKAMELKPLNVSNNALVWTASDYADGEAKVEQLAVRFKTKEMTESF 2862 HSP 3 Score: 122.094 bits (305), Expect = 2.745e-27 Identity = 67/166 (40.36%), Postives = 99/166 (59.64%), Query Frame = 3 Query: 180 NESPGTGKKSEAMASTTEGDHREEEVPHNEDEDTGAQVAPIVKLEE-VAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSVENCKSFMEMVHE 674 ++SP +S A T E E +V E+ D G P+V L + V V++GEE+E + +AKLYR+DKD QWKERG G +K+L++ +VR+VMR+ + LK+CANH + P M++Q G ++ VW A D+ADGE K E +RF + SF ++ E Sbjct: 2115 SKSPAKLNQSGASVGTDE----ESDVTQEEERD-GQYFEPVVPLPDLVEVSSGEENEQVVFSHRAKLYRYDKDVGQWKERGIGDIKILQNYDNKQVRIVMRRDQVLKLCANHRITPDMTLQTMKGTERVWVWTACDFADGERKIEHLAVRFKLQDVADSFKKIFDE 2275 HSP 4 Score: 120.168 bits (300), Expect = 1.043e-26 Identity = 60/164 (36.59%), Postives = 105/164 (64.02%), Query Frame = 3 Query: 186 SPGTGKKSEAMASTTEGDHREEEVPHNEDEDTGAQVAPIVKL-EEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSVENCKSFMEMVHE 674 S +GK +E A+T+ ++++ ED D P+V++ E+V + TGEEDE + + KL+RFD + +QWKERG G +K+LK++V GK+R++MR+ + LK+CANH + M+++ +G+D++ +W A+D++DG+ K E +F + E + F + E Sbjct: 1817 SSQSGKVAEK-ANTSSDLEKDDDAYKTEDSDD-IHFEPVVQMPEKVELVTGEEDEKVLYSQRVKLFRFDAEISQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLEQLAAKFKTPELAEEFKQKFEE 1978
BLAST of FC932080 vs. ExPASy Swiss-Prot
Match: RBP2_HUMAN (E3 SUMO-protein ligase RANBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 6.314e-32 Identity = 65/133 (48.87%), Postives = 89/133 (66.92%), Query Frame = 3 Query: 261 HNEDEDTGAQVAPIVKL-EEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSVENCKSF 656 H +D+D G P+V L +++ V TGEEDE+ +AKL+RFD + +WKERG G VK+L+HK +GK+RL+MR+ + LKICANH + P M + +AG+D+S VWHA DYAD K E IRF + E F Sbjct: 1162 HGDDDDDGPHFEPVVPLPDKIEVKTGEEDEEEFFCNRAKLFRFDVESKEWKERGIGNVKILRHKTSGKIRLLMRREQVLKICANHYISPDMKLTPNAGSDRSFVWHALDYADELPKPEQLAIRFKTPEEAALF 1294 HSP 2 Score: 123.635 bits (309), Expect = 9.435e-28 Identity = 62/146 (42.47%), Postives = 89/146 (60.96%), Query Frame = 3 Query: 237 DHREEEVPHNEDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSVENCKSFMEMVHE 674 D +EEV HNED PIV L EV V +GEEDE+ + +AKLYR+D+D +QWKERG G +K+L H + R++MR+ + K+CANH++ M ++ ++ + VW A+DYADGE K E +RF + E F + E Sbjct: 2898 DGSDEEVVHNED----IHFEPIVSLPEVEVKSGEEDEEILFKERAKLYRWDRDVSQWKERGVGDIKILWHTMKNYYRILMRRDQVFKVCANHVITKTMELKPLNVSNNALVWTASDYADGEAKVEQLAVRFKTKEVADCFKKTFEE 3039 HSP 3 Score: 122.865 bits (307), Expect = 1.609e-27 Identity = 64/164 (39.02%), Postives = 96/164 (58.54%), Query Frame = 3 Query: 186 SPGTGKKSEAMASTTEGDHREEEVPHNEDEDTGAQVAPIVKLEE-VAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSVENCKSFMEMVHE 674 SP + T+ G E +V E+ D G P+V L + V V++GEE+E + +AKLYR+DKD QWKERG G +K+L++ +VR+VMR+ + LK+CANH + P M++Q G ++ +W A D+ADGE K E +RF + SF ++ E Sbjct: 2276 SPSKSPAKLNQSGTSVGTDEESDVTQEEERD-GQYFEPVVPLPDLVEVSSGEENEQVVFSHRAKLYRYDKDVGQWKERGIGDIKILQNYDNKQVRIVMRRDQVLKLCANHRITPDMTLQNMKGTERVWLWTACDFADGERKVEHLAVRFKLQDVADSFKKIFDE 2438 HSP 4 Score: 122.094 bits (305), Expect = 2.745e-27 Identity = 55/155 (35.48%), Postives = 99/155 (63.87%), Query Frame = 3 Query: 213 AMASTTEGDHREEEVPHNEDEDTGAQVAPIVKL-EEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSVENCKSFMEMVHE 674 A + T GD +++ + ++ P+V++ E+V + TGEEDE + + KL+RFD + +QWKERG G +K+LK++V GK+R++MR+ + LK+CANH + M+++ +G+D++ +W A+D++DG+ K E +F + E + F + E Sbjct: 1987 ANKANTSGDFEKDDDAYKTEDSDDIHFEPVVQMPEKVELVTGEEDEKVLYSQRVKLFRFDAEVSQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLEQLAAKFKTPELAEEFKQKFEE 2141
BLAST of FC932080 vs. ExPASy Swiss-Prot
Match: YRB1_YEAST (Ran-specific GTPase-activating protein 1 OS=Saccharomyces cerevisiae GN=YRB1 PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.133e-31 Identity = 72/166 (43.37%), Postives = 101/166 (60.84%), Query Frame = 3 Query: 198 GKKSEAMASTTEGDHREEEVPHNED---EDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWH-AADYADGELKDELFCIRFGSVENCKSFMEMVHEXAE 683 GKK+E + + + +EE D E P+V LE+V V T EEDE+ + ++AKL+RFD D +WKERG G K LK+K T KVR++MR+ KTLKICANH++ P +++ + G+D+S V+ AD A+GE + F IRFGS EN F E + E Sbjct: 31 GKKAEKPETKKDEEDTKEETKKEGDDAPESPDIHFEPVVHLEKVDVKTMEEDEEVLYKVRAKLFRFDADAKEWKERGTGDCKFLKNKKTNKVRILMRRDKTLKICANHIIAPEYTLKPNVGSDRSWVYACTADIAEGEAEAFTFAIRFGSKENADKFKEEFEKAQE 196
BLAST of FC932080 vs. ExPASy Swiss-Prot
Match: RANG_HUMAN (Ran-specific GTPase-activating protein OS=Homo sapiens GN=RANBP1 PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.031e-30 Identity = 71/157 (45.22%), Postives = 98/157 (62.42%), Query Frame = 3 Query: 213 AMASTTEGDHREEEVPHNEDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRF--DKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHA-ADYADGELKDELFCIRFGSVENCKSFMEMVHE 674 A A T DH + + ++ + Q PIV L E + T EEDE+ + ++AKL+RF + D +WKERG G VKLLKHK G +RL+MR+ KTLKICANH + PMM ++ +AG+D++ VW+ AD+AD K EL IRF + EN + F E Sbjct: 2 AAAKDTHEDH-DTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEE 157
BLAST of FC932080 vs. ExPASy Swiss-Prot
Match: RANG_BOVIN (Ran-specific GTPase-activating protein OS=Bos taurus GN=RANBP1 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.653e-30 Identity = 71/157 (45.22%), Postives = 98/157 (62.42%), Query Frame = 3 Query: 213 AMASTTEGDHREEEVPHNEDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRF--DKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHA-ADYADGELKDELFCIRFGSVENCKSFMEMVHE 674 A A T DH + + ++ + Q PIV L E + T EEDE+ + ++AKL+RF + D +WKERG G VKLLKHK G +RL+MR+ KTLKICANH + PMM ++ +AG+D++ VW+ AD+AD K EL IRF + EN + F E Sbjct: 2 AAAKDTHEDH-DTSTENADESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGTIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKQELLAIRFLNAENAQKFKTKFEE 157
BLAST of FC932080 vs. ExPASy Swiss-Prot
Match: RANG_MOUSE (Ran-specific GTPase-activating protein OS=Mus musculus GN=Ranbp1 PE=1 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 7.718e-30 Identity = 71/157 (45.22%), Postives = 96/157 (61.15%), Query Frame = 3 Query: 216 MASTTEGDHREEEVPHNEDEDT-GAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRF--DKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHA-ADYADGELKDELFCIRFGSVENCKSFMEMVHE 674 MA+ + + N DE Q PIV L E + T EEDE+ + ++AKL+RF + D +WKERG G VKLLKHK G +RL+MR+ KTLKICANH + PMM ++ +AG+D++ VW+ AD+AD K EL IRF + EN + F E Sbjct: 1 MAAAKDSHEDHDTSTENADESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGTIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEE 157 The following BLAST results are available for this feature:
BLAST of FC932080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932080 ID=FC932080; Name=FC932080; organism=Citrus clementina; type=EST; length=683bpback to top |