FC932081
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932081 vs. ExPASy Swiss-Prot
Match: TCPB_MOUSE (T-complex protein 1 subunit beta OS=Mus musculus GN=Cct2 PE=1 SV=4) HSP 1 Score: 174.866 bits (442), Expect = 3.537e-43 Identity = 90/134 (67.16%), Postives = 109/134 (81.34%), Query Frame = 1 Query: 277 SMGVERIFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGVDKILQSTGRGREVTVTNDGATILKSPHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTHISGFRMAAECAR 678 S+ IF+ A+EE+ E AR++SF+GA+AI DLVK+TLGPKG+DKIL S+GR + VTNDGATILK+ +DNPAAKVLVD+S+VQDDEVGDGTTSV VLA ELLREAE L+A KIHP T ISG+R A + AR Sbjct: 5 SLAPVNIFKAGADEERAETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDAALMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIISGWREATKAAR 138
BLAST of FC932081 vs. ExPASy Swiss-Prot
Match: TCPB_RAT (T-complex protein 1 subunit beta OS=Rattus norvegicus GN=Cct2 PE=1 SV=3) HSP 1 Score: 174.096 bits (440), Expect = 6.034e-43 Identity = 89/134 (66.42%), Postives = 109/134 (81.34%), Query Frame = 1 Query: 277 SMGVERIFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGVDKILQSTGRGREVTVTNDGATILKSPHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTHISGFRMAAECAR 678 S+ IF+ A+EE+ E AR++SF+GA+AI DLVK+TLGPKG+DKIL S+GR + VTNDGATILK+ +DNPAAKVLVD+S+VQDDEVGDGTTSV VLA ELLREAE L+A KIHP T I+G+R A + AR Sbjct: 5 SLAPVNIFKAGADEERAETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAAR 138
BLAST of FC932081 vs. ExPASy Swiss-Prot
Match: TCPB_BOVIN (T-complex protein 1 subunit beta OS=Bos taurus GN=CCT2 PE=2 SV=3) HSP 1 Score: 174.096 bits (440), Expect = 6.034e-43 Identity = 89/134 (66.42%), Postives = 109/134 (81.34%), Query Frame = 1 Query: 277 SMGVERIFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGVDKILQSTGRGREVTVTNDGATILKSPHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTHISGFRMAAECAR 678 S+ IF+ A+EE+ E AR++SF+GA+AI DLVK+TLGPKG+DKIL S+GR + VTNDGATILK+ +DNPAAKVLVD+S+VQDDEVGDGTTSV VLA ELLREAE L+A KIHP T I+G+R A + AR Sbjct: 5 SLAPVNIFKAGADEERAETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAAR 138
BLAST of FC932081 vs. ExPASy Swiss-Prot
Match: TCPB_MACFA (T-complex protein 1 subunit beta OS=Macaca fascicularis GN=CCT2 PE=2 SV=3) HSP 1 Score: 173.711 bits (439), Expect = 7.880e-43 Identity = 89/134 (66.42%), Postives = 108/134 (80.60%), Query Frame = 1 Query: 277 SMGVERIFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGVDKILQSTGRGREVTVTNDGATILKSPHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTHISGFRMAAECAR 678 S+ IF+ A+EE+ E AR+ SF+GA+AI DLVK+TLGPKG+DKIL S+GR + VTNDGATILK+ +DNPAAKVLVD+S+VQDDEVGDGTTSV VLA ELLREAE L+A KIHP T I+G+R A + AR Sbjct: 5 SLAPVNIFKAGADEERAETARLTSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAAR 138
BLAST of FC932081 vs. ExPASy Swiss-Prot
Match: TCPB_HUMAN (T-complex protein 1 subunit beta OS=Homo sapiens GN=CCT2 PE=1 SV=4) HSP 1 Score: 173.711 bits (439), Expect = 7.880e-43 Identity = 89/134 (66.42%), Postives = 108/134 (80.60%), Query Frame = 1 Query: 277 SMGVERIFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGVDKILQSTGRGREVTVTNDGATILKSPHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTHISGFRMAAECAR 678 S+ IF+ A+EE+ E AR+ SF+GA+AI DLVK+TLGPKG+DKIL S+GR + VTNDGATILK+ +DNPAAKVLVD+S+VQDDEVGDGTTSV VLA ELLREAE L+A KIHP T I+G+R A + AR Sbjct: 5 SLAPVNIFKAGADEERAETARLTSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAAR 138
BLAST of FC932081 vs. ExPASy Swiss-Prot
Match: TCPB_DICDI (T-complex protein 1 subunit beta OS=Dictyostelium discoideum GN=cct2 PE=1 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.344e-42 Identity = 88/128 (68.75%), Postives = 103/128 (80.47%), Query Frame = 1 Query: 295 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGVDKILQSTGRGREVTVTNDGATILKSPHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTHISGFRMAAECAR 678 I A+EE+GE AR++SFVGA+AI DLVKTTLGPKG+DKIL S E+ +TNDGATIL +IDNPAAK+LVDIS+ QDDEVGDGTTSV VLAGELLRE E+LV K+HP T ISG+R+A E AR Sbjct: 10 ILNQNASEERGEIARLSSFVGAIAITDLVKTTLGPKGMDKILISASNPNELIITNDGATILTKIYIDNPAAKILVDISRTQDDEVGDGTTSVCVLAGELLREGERLVQQKVHPQTIISGWRLALETAR 137
BLAST of FC932081 vs. ExPASy Swiss-Prot
Match: TCPB_SCHPO (Probable T-complex protein 1 subunit beta OS=Schizosaccharomyces pombe GN=cct2 PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 8.155e-40 Identity = 85/133 (63.91%), Postives = 105/133 (78.95%), Query Frame = 1 Query: 277 SMGVERIFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGVDKILQSTGRGREVTVTNDGATILKSPHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTHISGFRMAAECA 675 S+ +IF + +E+GE AR++SFVGA+A+ DLVK+TLGPKG+DKILQS G ++ VTNDGATILKS +DN AAKVLV+ISKVQDDEVGDGTTSV V A ELLR+AE +V AKIHP I G+R+A + A Sbjct: 2 SLNPHQIFNESGIQERGENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSG-DIVVTNDGATILKSIALDNAAAKVLVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVIIDGYRIATKTA 133
BLAST of FC932081 vs. ExPASy Swiss-Prot
Match: TCPB_YEAST (T-complex protein 1 subunit beta OS=Saccharomyces cerevisiae GN=CCT2 PE=1 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.373e-39 Identity = 85/129 (65.89%), Postives = 104/129 (80.62%), Query Frame = 1 Query: 292 RIFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGVDKILQSTGRGREVTVTNDGATILKSPHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLV-AAKIHPMTHISGFRMAAECA 675 +IF D+ EE+ E AR+++FVGA+A+ DLVK+TLGPKG+DK+LQS VTNDGATILKS +DNPAAKVLV+ISKVQDDEVGDGTTSV VL+ ELLREAEKL+ +KIHP T I G+R+A+ A Sbjct: 4 QIFGDQVTEERAENARLSAFVGAIAVGDLVKSTLGPKGMDKLLQSAS-SNTCMVTNDGATILKSIPLDNPAAKVLVNISKVQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAA 131
BLAST of FC932081 vs. ExPASy Swiss-Prot
Match: TCPB_CAEEL (T-complex protein 1 subunit beta OS=Caenorhabditis elegans GN=cct-2 PE=2 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 2.623e-38 Identity = 86/131 (65.65%), Postives = 101/131 (77.10%), Query Frame = 1 Query: 292 RIFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGVDKILQSTG--RGREVTVTNDGATILKSPHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTHISGFRMAAECAR 678 +I +D A EE+GE AR++SFVGA+AI DLVK+TLGPKG+DKIL S + VTNDGATILKS +DNPAAKVLVD+S QD EVGDGTTSV VLA ELL+EAEKLV +IHP T ISG+R A A+ Sbjct: 5 QILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGYRRALGIAQ 135
BLAST of FC932081 vs. ExPASy Swiss-Prot
Match: THSB_HALSA (Thermosome subunit beta OS=Halobacterium salinarium GN=thsB PE=3 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 4.641e-27 Identity = 63/128 (49.22%), Postives = 88/128 (68.75%), Query Frame = 1 Query: 295 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGVDKILQSTGRGREVTVTNDGATILKSPHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTHISGFRMAAECAR 678 I D+A K A+ + A A+AD V++TLGPKG+DK+L S+ +VTVTNDG TIL+ IDNP A+++V++++ Q+DE GDGTT+ V +AGELL+ AE L+ IHP I G+ +AAE AR Sbjct: 14 IMGDDAQRVKDRDAQEHNISAARAVADAVRSTLGPKGMDKMLVSSMG--DVTVTNDGVTILQEMDIDNPTAEMIVEVAETQEDEAGDGTTTAVAIAGELLKNAEDLLERDIHPTAIIKGYNLAAEQAR 139 The following BLAST results are available for this feature:
BLAST of FC932081 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 440
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932081 ID=FC932081; Name=FC932081; organism=Citrus clementina; type=EST; length=679bpback to top |