FC932082

Overview
NameFC932082
Unique NameFC932082
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14338 contig Ccv1_Contig14338:30..730. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932082 vs. ExPASy Swiss-Prot
Match: LYPA2_RAT (Acyl-protein thioesterase 2 OS=Rattus norvegicus GN=Lypla2 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.814e-21
Identity = 64/172 (37.21%), Postives = 91/172 (52.91%), Query Frame = 2
Query:  194 KHQATVVWLHGLGDNGSSWSQLLETLPLPNIKWICPTAPTRPMTIFGGFPSTAWFDVGDLSEDVPDDLEGLDAAAAHVVNLLSTEPTD----IKLGVGGFSMGAATALYSA-TCFAHGKYGNGNPYPAKLSPVVGLSGWLPCSRPXXXXXXXXXXXXXXXSLPILLCHGKGD 694
            +  A V++LHGLGD G SW+  L T+ LP++K+ICP AP  P+T+       +WFD+  LS D P+D  G+  AA ++  L+  E  +     ++ +GGFS G A +LY+A TC          P+P  L+ +V LS WLP  R                 L IL CHG+ D
Sbjct:   22 RETAAVIFLHGLGDTGHSWADALSTIRLPHVKYICPHAPRIPVTLNMKMVMPSWFDLMGLSPDAPEDEAGIKKAAENIKALIEHEMKNGIPANRIVLGGFSQGGALSLYTALTC----------PHP--LAGIVALSCWLPLHR-----NFPQAANGSAKDLAILQCHGELD 176          
BLAST of FC932082 vs. ExPASy Swiss-Prot
Match: LYPA2_MOUSE (Acyl-protein thioesterase 2 OS=Mus musculus GN=Lypla2 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.814e-21
Identity = 64/172 (37.21%), Postives = 91/172 (52.91%), Query Frame = 2
Query:  194 KHQATVVWLHGLGDNGSSWSQLLETLPLPNIKWICPTAPTRPMTIFGGFPSTAWFDVGDLSEDVPDDLEGLDAAAAHVVNLLSTEPTD----IKLGVGGFSMGAATALYSA-TCFAHGKYGNGNPYPAKLSPVVGLSGWLPCSRPXXXXXXXXXXXXXXXSLPILLCHGKGD 694
            +  A V++LHGLGD G SW+  L T+ LP++K+ICP AP  P+T+       +WFD+  LS D P+D  G+  AA ++  L+  E  +     ++ +GGFS G A +LY+A TC          P+P  L+ +V LS WLP  R                 L IL CHG+ D
Sbjct:   22 RETAAVIFLHGLGDTGHSWADALSTIRLPHVKYICPHAPRIPVTLNMKMVMPSWFDLMGLSPDAPEDEAGIKKAAENIKALIEHEMKNGIPANRIVLGGFSQGGALSLYTALTC----------PHP--LAGIVALSCWLPLHR-----NFPQAANGSAKDLAILQCHGELD 176          
BLAST of FC932082 vs. ExPASy Swiss-Prot
Match: LYPA2_HUMAN (Acyl-protein thioesterase 2 OS=Homo sapiens GN=LYPLA2 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.814e-21
Identity = 64/172 (37.21%), Postives = 91/172 (52.91%), Query Frame = 2
Query:  194 KHQATVVWLHGLGDNGSSWSQLLETLPLPNIKWICPTAPTRPMTIFGGFPSTAWFDVGDLSEDVPDDLEGLDAAAAHVVNLLSTEPTD----IKLGVGGFSMGAATALYSA-TCFAHGKYGNGNPYPAKLSPVVGLSGWLPCSRPXXXXXXXXXXXXXXXSLPILLCHGKGD 694
            +  A V++LHGLGD G SW+  L T+ LP++K+ICP AP  P+T+       +WFD+  LS D P+D  G+  AA ++  L+  E  +     ++ +GGFS G A +LY+A TC          P+P  L+ +V LS WLP  R                 L IL CHG+ D
Sbjct:   22 RETAAVIFLHGLGDTGHSWADALSTIRLPHVKYICPHAPRIPVTLNMKMVMPSWFDLMGLSPDAPEDEAGIKKAAENIKALIEHEMKNGIPANRIVLGGFSQGGALSLYTALTC----------PHP--LAGIVALSCWLPLHR-----AFPQAANGSAKDLAILQCHGELD 176          
BLAST of FC932082 vs. ExPASy Swiss-Prot
Match: APTH1_SCHPO (Acyl-protein thioesterase 1 OS=Schizosaccharomyces pombe GN=SPAC8E11.04c PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.877e-18
Identity = 51/148 (34.46%), Postives = 81/148 (54.73%), Query Frame = 2
Query:  176 VVRPKGKHQATVVWLHGLGDNGSSWSQLLETLP-LPNIKWICPTAPTRPMTIFGGFPSTAWFDVGDLSEDVPDDLEGLDAAAAHVVNLLSTE-----PTDIKLGVGGFSMGAATALYSATCFAHGKYGNGNPYPAKLSPVVGLSGWLP 601
            ++ P   H ATV++LHGLGD+G  WS +  T     +IKWI P AP+ P+T+  G    AW+D+   ++   +D  G+  +A  +  L+  E     P+D ++ +GGFS G   +LY+           G  YP +L+ ++G SG+LP
Sbjct:    9 IINPSVAHTATVIFLHGLGDSGQGWSFMANTWSNFKHIKWIFPNAPSIPVTVNNGMKMPAWYDIYSFADMKREDENGILRSAGQLHELIDAELALGIPSD-RILIGGFSQGCMVSLYA-----------GLTYPKRLAGIMGHSGFLP 144          
BLAST of FC932082 vs. ExPASy Swiss-Prot
Match: LYPA1_RABIT (Acyl-protein thioesterase 1 OS=Oryctolagus cuniculus GN=LYPLA1 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.711e-17
Identity = 59/178 (33.15%), Postives = 83/178 (46.63%), Query Frame = 2
Query:  176 VVRPKGKHQATVVWLHGLGDNGSSWSQLLETLPLPNIKWICPTAPTRPMTIFGGFPSTAWFDVGDLSEDVPDDLEGLDAAAAHVVNLLSTE-----PTDIKLGVGGFSMGAATALYSATCFAHGKYGNGNPYPAKLSPVVGLSGWLPCSRPXXXXXXXXXXXXXXXSLPILLCHGKGD 694
            VV    K  A V++LHGLGD G  W++    +  P+IK+ICP AP  P+T+       +WFD+  LS D  +D  G+  AA  V  L+  E     P++ ++ +GGFS G A +LY+A                KL+ V  LS WL    P                + +L CHG  D
Sbjct:   13 VVPAARKATAAVIFLHGLGDTGHGWAEAFAGIKSPHIKYICPHAPVMPVTLNMNMAMPSWFDIVGLSPDSQEDESGIKQAAETVKALIDQEVKNGIPSN-RIILGGFSQGGALSLYTALTTQQ-----------KLAGVTALSCWL----PLRASFSQGPINSANRDISVLQCHGDCD 174          
BLAST of FC932082 vs. ExPASy Swiss-Prot
Match: LYPA1_MOUSE (Acyl-protein thioesterase 1 OS=Mus musculus GN=Lypla1 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.711e-17
Identity = 59/178 (33.15%), Postives = 83/178 (46.63%), Query Frame = 2
Query:  176 VVRPKGKHQATVVWLHGLGDNGSSWSQLLETLPLPNIKWICPTAPTRPMTIFGGFPSTAWFDVGDLSEDVPDDLEGLDAAAAHVVNLLSTE-----PTDIKLGVGGFSMGAATALYSATCFAHGKYGNGNPYPAKLSPVVGLSGWLPCSRPXXXXXXXXXXXXXXXSLPILLCHGKGD 694
            VV    K  A V++LHGLGD G  W++    +  P+IK+ICP AP  P+T+       +WFD+  LS D  +D  G+  AA  V  L+  E     P++ ++ +GGFS G A +LY+A                KL+ V  LS WL    P                + +L CHG  D
Sbjct:   13 VVPAARKATAAVIFLHGLGDTGHGWAEAFAGIKSPHIKYICPHAPVMPVTLNMNMAMPSWFDIVGLSPDSQEDESGIKQAAETVKALIDQEVKNGIPSN-RIILGGFSQGGALSLYTALTTQQ-----------KLAGVTALSCWL----PLRASFSQGPINSANRDISVLQCHGDCD 174          
BLAST of FC932082 vs. ExPASy Swiss-Prot
Match: LYPA1_PONAB (Acyl-protein thioesterase 1 OS=Pongo abelii GN=LYPLA1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.624e-17
Identity = 58/178 (32.58%), Postives = 84/178 (47.19%), Query Frame = 2
Query:  176 VVRPKGKHQATVVWLHGLGDNGSSWSQLLETLPLPNIKWICPTAPTRPMTIFGGFPSTAWFDVGDLSEDVPDDLEGLDAAAAHVVNLLSTE-----PTDIKLGVGGFSMGAATALYSATCFAHGKYGNGNPYPAKLSPVVGLSGWLPCSRPXXXXXXXXXXXXXXXSLPILLCHGKGD 694
            +V    K  A V++LHGLGD G  W++    +   +IK+ICP AP RP+T+       +WFD+  LS D  +D  G+  AA ++  L+  E     P++ ++ +GGFS G A +LY+A                KL+ V  LS WL    P                + IL CHG  D
Sbjct:   13 IVPAARKATAAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNMAMPSWFDIIGLSPDSQEDESGIKQAAENIKALIDQEVKNGIPSN-RIILGGFSQGGALSLYTALTTQQ-----------KLAGVTALSCWL----PLRASFPQGPIGGANRDISILQCHGDCD 174          
BLAST of FC932082 vs. ExPASy Swiss-Prot
Match: LYPA1_HUMAN (Acyl-protein thioesterase 1 OS=Homo sapiens GN=LYPLA1 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.039e-17
Identity = 58/178 (32.58%), Postives = 84/178 (47.19%), Query Frame = 2
Query:  176 VVRPKGKHQATVVWLHGLGDNGSSWSQLLETLPLPNIKWICPTAPTRPMTIFGGFPSTAWFDVGDLSEDVPDDLEGLDAAAAHVVNLLSTE-----PTDIKLGVGGFSMGAATALYSATCFAHGKYGNGNPYPAKLSPVVGLSGWLPCSRPXXXXXXXXXXXXXXXSLPILLCHGKGD 694
            +V    K  A V++LHGLGD G  W++    +   +IK+ICP AP RP+T+       +WFD+  LS D  +D  G+  AA ++  L+  E     P++ ++ +GGFS G A +LY+A                KL+ V  LS WL    P                + IL CHG  D
Sbjct:   13 IVPAARKATAAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAAENIKALIDQEVKNGIPSN-RIILGGFSQGGALSLYTALTTQQ-----------KLAGVTALSCWL----PLRASFPQGPIGGANRDISILQCHGDCD 174          
BLAST of FC932082 vs. ExPASy Swiss-Prot
Match: APT11_DICDI (Acyl-protein thioesterase 1 homolog 1 OS=Dictyostelium discoideum GN=DDB_G0282005 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.345e-16
Identity = 55/185 (29.73%), Postives = 92/185 (49.73%), Query Frame = 2
Query:  170 TYVVRPKGKHQATVVWLHGLGDNGSSWSQLLETLPLPN---IKWICPTAPTRPMTIFGGFPSTAWFDVGDLSEDVPDDLEGLDAAAAHVVNLLSTEPTDIKLG-----VGGFSMGAATALYSATCFAHGKYGNGNPYPAKLSPVVGLSGWLPCSRPXXXXXXXXXXXXXXXSLPILLCHGKGDDV 700
            +Y+ +    H ATV++ HGLGD+G+ W +++E +   N   I++ICP AP + +T+ GGF   +W+D+  LS    +D   +D +   +  ++  E  + K+      +GGFS GAA +LY  T ++  +         KL   + LSG+LP +                   P+L+ HG  D V
Sbjct:    9 SYIQKEITTHSATVIFSHGLGDSGAGWIEVMEEIQSRNNGHIRFICPNAPIQAVTLNGGFKMPSWYDIKSLSSRGDEDPAQVDESKNIIETIIKHEMEEEKIPAERIIIGGFSQGAALSLY--TFYSQTE--------TKLGGCIALSGYLPLA-------TKFVANSLNKEQPLLMIHGDCDQV 176          
BLAST of FC932082 vs. ExPASy Swiss-Prot
Match: LYPA1_RAT (Acyl-protein thioesterase 1 OS=Rattus norvegicus GN=Lypla1 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.914e-16
Identity = 58/178 (32.58%), Postives = 82/178 (46.07%), Query Frame = 2
Query:  176 VVRPKGKHQATVVWLHGLGDNGSSWSQLLETLPLPNIKWICPTAPTRPMTIFGGFPSTAWFDVGDLSEDVPDDLEGLDAAAAHVVNLLSTE-----PTDIKLGVGGFSMGAATALYSATCFAHGKYGNGNPYPAKLSPVVGLSGWLPCSRPXXXXXXXXXXXXXXXSLPILLCHGKGD 694
            VV    K  A V++LHGLGD G  W++    +   +IK+ICP AP  P+T+       +WFD+  LS D  +D  G+  AA  V  L+  E     P++ ++ +GGFS G A +LY+A                KL+ V  LS WL    P                + +L CHG  D
Sbjct:   13 VVPAARKATAAVIFLHGLGDTGHGWAEAFAGIKSSHIKYICPHAPVMPVTLNMSMMMPSWFDIIGLSPDSQEDESGIKQAAETVKALIDQEVKNGIPSN-RIILGGFSQGGALSLYTALTTQQ-----------KLAGVTALSCWL----PLRASFSQGPINSANRDISVLQCHGDCD 174          
The following BLAST results are available for this feature:
BLAST of FC932082 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
LYPA2_RAT1.814e-2137.21Acyl-protein thioesterase 2 OS=Rattus norvegicus G... [more]
LYPA2_MOUSE1.814e-2137.21Acyl-protein thioesterase 2 OS=Mus musculus GN=Lyp... [more]
LYPA2_HUMAN1.814e-2137.21Acyl-protein thioesterase 2 OS=Homo sapiens GN=LYP... [more]
APTH1_SCHPO1.877e-1834.46Acyl-protein thioesterase 1 OS=Schizosaccharomyces... [more]
LYPA1_RABIT2.711e-1733.15Acyl-protein thioesterase 1 OS=Oryctolagus cunicul... [more]
LYPA1_MOUSE2.711e-1733.15Acyl-protein thioesterase 1 OS=Mus musculus GN=Lyp... [more]
LYPA1_PONAB4.624e-1732.58Acyl-protein thioesterase 1 OS=Pongo abelii GN=LYP... [more]
LYPA1_HUMAN6.039e-1732.58Acyl-protein thioesterase 1 OS=Homo sapiens GN=LYP... [more]
APT11_DICDI1.345e-1629.73Acyl-protein thioesterase 1 homolog 1 OS=Dictyoste... [more]
LYPA1_RAT3.914e-1632.58Acyl-protein thioesterase 1 OS=Rattus norvegicus G... [more]

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Properties
Property NameValue
Genbank descriptionC34204D11EF PostHarveN Citrus clementina cDNA clone C34204D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932082 ID=FC932082; Name=FC932082; organism=Citrus clementina; type=EST; length=700bp
GAGCTCGTGGAGTTATCACATAGCTCTGGAGTTCTGCTTCTGGATCTGTG
CTCTTCTCAGTTACTTTACCTGCATTGGTGATAATCTTTCAAGGGTTAAA
ATGAGCTTTACAGGGCCATCCATGAGTTCTGGGGGTAATACTGTTAGAAG
AGCAATTGAGTTCGGAAGGACCTATGTGGTCAGGCCCAAAGGTAAACACC
AAGCCACTGTTGTGTGGCTTCATGGACTTGGCGATAATGGTTCAAGCTGG
TCCCAGCTCCTCGAGACTCTTCCTCTTCCAAATATTAAATGGATTTGCCC
AACTGCCCCTACTCGACCAATGACTATATTTGGCGGCTTTCCATCCACTG
CCTGGTTTGATGTGGGAGACCTTTCAGAAGATGTTCCTGATGACTTAGAG
GGTTTAGATGCCGCAGCTGCACATGTTGTGAATTTATTGTCCACTGAGCC
CACTGACATTAAACTTGGTGTTGGAGGTTTCAGTATGGGAGCAGCAACCG
CACTGTACTCTGCAACCTGCTTTGCCCATGGAAAATATGGGAATGGCAAT
CCATACCCTGCTAAATTGAGTCCAGTTGTAGGACTGAGTGGCTGGCTTCC
TTGCTCAAGACCTTGAAGAACAACTAGGTGGAGAAATGAAGCTAGAAGAC
GTGCTGCATCCTTGCCCATTTTGCTCTGCCATGGAAAGGGTGATGATGTG
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