FC932088

Overview
NameFC932088
Unique NameFC932088
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length744
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14439 contig Ccv1_Contig14439:35..777. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932088 vs. ExPASy Swiss-Prot
Match: SAP8_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. japonica GN=SAP8 PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.188e-60
Identity = 114/174 (65.52%), Postives = 133/174 (76.44%), Query Frame = 2
Query:  179 MDHDETGCQAPPEGPILCINNCGFFGSVTTMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPK--EGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPCDQAEKLDKI 694
            M+H ETGCQ P EGPILCINNCGFFGS  TMNMCSKC+K++++KQ+QAKLAASSI SIVN     +G E + A   +V  + VE K +  QP+  +  SE V   PK  EGP+RCS+C+KRVGLTGF CRCGNLYC  HRYSDKH+C FDYRTAARDAI KANP  +AEKLDKI
Sbjct:    1 MEHKETGCQQP-EGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVN--GGDSGKEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171          
BLAST of FC932088 vs. ExPASy Swiss-Prot
Match: SAP8_ORYSI (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. indica GN=SAP8 PE=2 SV=2)

HSP 1 Score: 232.261 bits (591), Expect = 2.188e-60
Identity = 114/174 (65.52%), Postives = 133/174 (76.44%), Query Frame = 2
Query:  179 MDHDETGCQAPPEGPILCINNCGFFGSVTTMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPK--EGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPCDQAEKLDKI 694
            M+H ETGCQ P EGPILCINNCGFFGS  TMNMCSKC+K++++KQ+QAKLAASSI SIVN     +G E + A   +V  + VE K +  QP+  +  SE V   PK  EGP+RCS+C+KRVGLTGF CRCGNLYC  HRYSDKH+C FDYRTAARDAI KANP  +AEKLDKI
Sbjct:    1 MEHKETGCQQP-EGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVN--GGDSGKEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171          
BLAST of FC932088 vs. ExPASy Swiss-Prot
Match: SAP4_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Oryza sativa subsp. japonica GN=SAP4 PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 3.493e-58
Identity = 109/174 (62.64%), Postives = 129/174 (74.14%), Query Frame = 2
Query:  179 MDHDETGCQAPPEGPILCINNCGFFGSVTTMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPK--EGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPCDQAEKLDKI 694
            M+H E GCQ P EGPILCINNCGFFGS  TMNMCSKC+K++++K++QAKLAASSI SIVN           A+ +  V  + VE K + VQP+  +  SE V   PK  EGP+RC++C+KRVGLTGF CRCGN+YC  HRYSDKH C FDYRTAARDAI KANP  +AEKLDKI
Sbjct:    1 MEHKEAGCQQP-EGPILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNGCDGGKEHIVAASGSTAVAVAQVEAKTLVVQPTDVAGTSEEVAVVPKVKEGPNRCATCRKRVGLTGFNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173          
BLAST of FC932088 vs. ExPASy Swiss-Prot
Match: SAP2_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Arabidopsis thaliana GN=SAP2 PE=2 SV=2)

HSP 1 Score: 214.542 bits (545), Expect = 4.722e-55
Identity = 105/178 (58.99%), Postives = 132/178 (74.16%), Query Frame = 2
Query:  179 MDHDETGCQAPPEGPILCINNCGFFGSVTTMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNG--SESVAAATVDVQASSVEPKIISVQPSCASELSESVE----AKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPCDQAEKLDKI 694
            MDHD+TGCQ+PPEGP LC NNCGFFGS  TMNMCSKC+KD++ +Q+Q    AS++      TSSS+    E+  AA VD++  SVEP  +SVQPS    ++E V     AKPK GPSRC++C KRVGLTGFKCRCG+L+C +HRY+D H+C F+Y  AA++AI KANP  +AEKLDKI
Sbjct:    1 MDHDKTGCQSPPEGPKLCTNNCGFFGSAATMNMCSKCHKDMLFQQEQGAKFASAVSG----TSSSSNIIKETFTAALVDIETKSVEPMTVSVQPSSVQVVAEVVAPEEAAKPK-GPSRCTTCNKRVGLTGFKCRCGSLFCGTHRYADVHDCSFNYHAAAQEAIAKANPVVKAEKLDKI 173          
BLAST of FC932088 vs. ExPASy Swiss-Prot
Match: SAP6_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Arabidopsis thaliana GN=SAP6 PE=2 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 2.978e-33
Identity = 78/177 (44.07%), Postives = 109/177 (61.58%), Query Frame = 2
Query:  188 DETGCQAPPEGPILCINNCGFFGSVTTMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSE--------SVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPCDQAEKLDKI 694
            +E  CQ P E   LC+NNCGF GS  TMN+CS CY D+ LKQ Q    +SSI S V E+S S    S +++ +   +S + P ++   PS   E+ E        + E   ++ P+RC++C+KRVGLTGFKCRCG ++C  HRY + H C +D+++A R+ I KANP  +A KL KI
Sbjct:    3 EEHRCQTP-ESNRLCVNNCGFLGSSATMNLCSNCYGDLCLKQQQQ---SSSIKSTV-ESSLSVSPPSSSSSEI---SSPIIPPLLK-NPSVKLEVPEKKAVISLPTTEQNQQQRPNRCTTCRKRVGLTGFKCRCGTMFCGVHRYPEIHGCSYDFKSAGREEIAKANPLVKAAKLQKI 170          
BLAST of FC932088 vs. ExPASy Swiss-Prot
Match: SAP9_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Oryza sativa subsp. japonica GN=SAP9 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.889e-33
Identity = 72/161 (44.72%), Postives = 97/161 (60.25%), Query Frame = 2
Query:  212 PEGPILCINNCGFFGSVTTMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPCDQAEKLDKI 694
            PE PILC+NNCGFFGS  T NMCSKCY+D +       +AA  +       +SS+ +    A   +V A++VE K  + +P             PK   +RC SC+K+VGLTGF+CRCG  +C +HRY++ H+C FDY+ A RD I K NP   AEK++KI
Sbjct:   17 PEAPILCVNNCGFFGSSMTNNMCSKCYRDFV---KVTTMAAPVVEKKAFTPASSSKTPLEPAKPDEVPAAAVEDKQAAQEP-------------PKPPSNRCLSCRKKVGLTGFQCRCGGTFCSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKINKI 161          
BLAST of FC932088 vs. ExPASy Swiss-Prot
Match: SAP7_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Arabidopsis thaliana GN=SAP7 PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.889e-33
Identity = 65/165 (39.39%), Postives = 105/165 (63.64%), Query Frame = 2
Query:  209 PPEGPILCINNCGFFGSVTTMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSC---ASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPCDQAEKLDKI 694
            PP  P LC N CGFFGS + MN+CSKCY+ +  ++DQ  +A +++ + +   S S  +       ++++ + +E  +++ +PS    A+E  E+  ++P    +RC SC K+VG+ GFKC+CG+ +C SHRY +KH C FD++   RDAI KANP  +A+K+ +I
Sbjct:   12 PPTEPKLCDNGCGFFGSPSNMNLCSKCYRSLRAEEDQTAVAKAAVKNSLKLPSCSIIAPG-QKHPLEIKPAHLETVVVTAEPSSVPVAAEQDEAEPSRPVRPNNRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGRDAIAKANPLVKADKVQRI 175          
BLAST of FC932088 vs. ExPASy Swiss-Prot
Match: SAP4_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Arabidopsis thaliana GN=SAP4 PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.634e-33
Identity = 71/169 (42.01%), Postives = 95/169 (56.21%), Query Frame = 2
Query:  188 DETGCQAPPEGPILCINNCGFFGSVTTMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPCDQAEKLDKI 694
            +E  C+ P EG  LC+NNCGFFGS  TMN+CS CY D+ LKQ Q     S++ S ++   +       A   +     + E K I +            +  P + P+RC+ C+KRVGLTGF CRCG  +C SHRY + H C FD+++A R+ I KANP   A KL KI
Sbjct:    3 EEHRCETP-EGHRLCVNNCGFFGSSATMNLCSNCYGDLCLKQQQQASMKSTVESSLSPVIAPVLENYAAELEIPTTKKTEEKKPIQIPTE---------QPSPPQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGREEIAKANPLVIAAKLQKI 161          
BLAST of FC932088 vs. ExPASy Swiss-Prot
Match: SAP1_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Arabidopsis thaliana GN=SAP1 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.251e-31
Identity = 65/161 (40.37%), Postives = 91/161 (56.52%), Query Frame = 2
Query:  212 PEGPILCINNCGFFGSVTTMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPCDQAEKLDKI 694
            P  P LC+  CGFFGS + MN+CSKCY+DI   ++Q   A +++   +N        +     T  V  S           S A+ L       PK   +RC SC K+VG+TGFKCRCG+ +C +HRY + H C FD++  AR+AI KANP  +A+K+D+I
Sbjct:   13 PSEPKLCVKGCGFFGSPSNMNLCSKCYRDIRATEEQTASAKAAVEKSLNPNKPKTQPQQSQEITQGVLGSGSSSSSTRGGDSAAAPLDP-----PKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVAREAIAKANPVVKADKVDRI 168          
BLAST of FC932088 vs. ExPASy Swiss-Prot
Match: SAP6_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Oryza sativa subsp. japonica GN=SAP6 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.134e-31
Identity = 71/169 (42.01%), Postives = 93/169 (55.03%), Query Frame = 2
Query:  188 DETGCQAPPEGPILCINNCGFFGSVTTMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPCDQAEKLDKI 694
            +ETG   P E PILC+NNCGFFGS  T NMCSKCY+D +         A ++ ++V +   ++ S +     V    S           S A       E  PK   +RC SC+K+VGLTGFKCRCG  +C  HRY+D H C FDY+   R+ I K NP  +A+K+ KI
Sbjct:   11 EETGVHTP-EAPILCVNNCGFFGSRMTENMCSKCYRDTV--------KAKTVATVVEKKPLASLSSTPLVTEVTDGGSG----------SVADGKQVMEEDTPKPPSNRCLSCRKKVGLTGFKCRCGGTFCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKITKI 160          
The following BLAST results are available for this feature:
BLAST of FC932088 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
SAP8_ORYSJ2.188e-6065.52Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP8_ORYSI2.188e-6065.52Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP4_ORYSJ3.493e-5862.64Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP2_ARATH4.722e-5558.99Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP6_ARATH2.978e-3344.07Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP9_ORYSJ3.889e-3344.72Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP7_ARATH3.889e-3339.39Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP4_ARATH6.634e-3342.01Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP1_ARATH1.251e-3140.37Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP6_ORYSJ2.134e-3142.01Zinc finger A20 and AN1 domain-containing stress-a... [more]

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Properties
Property NameValue
Genbank descriptionC34204E05EF PostHarveN Citrus clementina cDNA clone C34204E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932088 ID=FC932088; Name=FC932088; organism=Citrus clementina; type=EST; length=744bp
GAGAGACACCCGGAAAGGGAAACGAGGACGTCTCTCATCGGTTTTTGCCT
GCTCTCTCCCCGATAGGCCGATCTGGTCCATTTAATTTTAGGGGCTCATT
GGATGCTGGCTTGAGCTCGGGGATCGGCTTAAGGGATTCATTGCTGTTTC
TTCTGTTGCTCGCAGGGGTGGTGAAAACATGGACCATGATGAGACTGGAT
GCCAAGCTCCTCCTGAGGGCCCTATCTTGTGCATCAACAATTGTGGTTTC
TTTGGAAGTGTGACTACTATGAATATGTGTTCCAAATGCTACAAGGATAT
AATGCTGAAACAGGATCAAGCTAAGCTTGCTGCTTCATCTATTGGAAGCA
TTGTGAATGAAACGTCAAGCAGCAATGGAAGTGAATCTGTTGCTGCCGCC
ACTGTTGATGTGCAAGCTAGTTCAGTGGAGCCAAAAATCATCTCTGTGCA
GCCATCATGTGCTTCAGAATTGAGCGAGAGTGTGGAGGCAAAGCCGAAGG
AGGGTCCCAGCCGGTGCAGCAGTTGCAAGAAGCGTGTTGGTTTAACAGGA
TTCAAATGTCGCTGTGGTAACTTATACTGTGTGTCACATCGCTATTCGGA
CAAACATAACTGCCCCTTTGACTACCGCACTGCTGCTAGGGATGCTATAA
TTAAAGCAAACCCCTGTGATCAGGCTGAGAAGCTAGATAAAATCTAGATT
CAATGGGATGAGGTTTCAATATCAAGAATGATGATCTTGCTCAT
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