FC932089
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932089 vs. ExPASy Swiss-Prot
Match: TM9S4_RAT (Transmembrane 9 superfamily member 4 OS=Rattus norvegicus GN=Tm9sf4 PE=2 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 6.069e-57 Identity = 106/235 (45.11%), Postives = 154/235 (65.53%), Query Frame = 1 Query: 1 YEVEFVKSNIRWPSRWDAYLKMEGARVHWFSILNSLMVIFFLAGIVFVIFLRTVRRDLTRYEELDKEAQAQMNEELSGWKLVVGDVFREPDHPKLLCVMVGDGVQITGMAIVTIIFAALGFMSPASRGMLLTGMIFLFLFLGIAAGYVAVRMWRTIKGTSEGWRSVAWSAACFFPGIVFVILTVLNFVLWGSKSTSALPISLYFVLLSLWFCISVPLTLLGGFFGTRAEENTYPV 705 Y V + +S+I+W SRWD YL M ++HWFSI+NS++V+FFL+GI+ +I +RT+R+D+ Y +KE + E SGWKLV GDVFR P +P +L ++G G+Q+ M ++ I A LG +SP+SRG L+T FLF+F+G+ G+ A R++RT+KG W+ A+ A +PG+VF I VLN +WG S+ A+P LL +WF IS+PL LG +FG R + PV Sbjct: 253 YSVHWEESDIKWASRWDTYLTMSDVQIHWFSIINSVVVVFFLSGILSMIIIRTLRKDIANY---NKEDDIEDTMEESGWKLVHGDVFRPPQYPMILSSLLGSGIQLFCMILIVIFVAMLGMLSPSSRGALMTTACFLFMFMGVFGGFSAGRLYRTLKG--HRWKKGAFCTATLYPGVVFGICFVLNCFIWGKHSSGAVPFPTMVALLCMWFGISLPLVYLGYYFGFRKQPYDNPV 482
BLAST of FC932089 vs. ExPASy Swiss-Prot
Match: TM9S4_PONAB (Transmembrane 9 superfamily member 4 OS=Pongo abelii GN=TM9SF4 PE=2 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 6.069e-57 Identity = 106/235 (45.11%), Postives = 154/235 (65.53%), Query Frame = 1 Query: 1 YEVEFVKSNIRWPSRWDAYLKMEGARVHWFSILNSLMVIFFLAGIVFVIFLRTVRRDLTRYEELDKEAQAQMNEELSGWKLVVGDVFREPDHPKLLCVMVGDGVQITGMAIVTIIFAALGFMSPASRGMLLTGMIFLFLFLGIAAGYVAVRMWRTIKGTSEGWRSVAWSAACFFPGIVFVILTVLNFVLWGSKSTSALPISLYFVLLSLWFCISVPLTLLGGFFGTRAEENTYPV 705 Y V + +S+I+W SRWD YL M ++HWFSI+NS++V+FFL+GI+ +I +RT+R+D+ Y +KE + E SGWKLV GDVFR P +P +L ++G G+Q+ M ++ I A LG +SP+SRG L+T FLF+F+G+ G+ A R++RT+KG W+ A+ A +PG+VF I VLN +WG S+ A+P LL +WF IS+PL LG +FG R + PV Sbjct: 252 YSVHWEESDIKWASRWDTYLTMSDVQIHWFSIINSVVVVFFLSGILSMIIIRTLRKDIANY---NKEDDIEDTMEESGWKLVHGDVFRPPQYPMILSSLLGSGIQLFCMILIVIFVAMLGMLSPSSRGALMTTACFLFMFMGVFGGFSAGRLYRTLKG--HRWKKGAFCTATLYPGVVFGICFVLNCFIWGKHSSGAVPFPTMVALLCMWFGISLPLVYLGYYFGFRKQPYDNPV 481
BLAST of FC932089 vs. ExPASy Swiss-Prot
Match: TM9S4_MOUSE (Transmembrane 9 superfamily member 4 OS=Mus musculus GN=Tm9sf4 PE=2 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 6.069e-57 Identity = 106/235 (45.11%), Postives = 154/235 (65.53%), Query Frame = 1 Query: 1 YEVEFVKSNIRWPSRWDAYLKMEGARVHWFSILNSLMVIFFLAGIVFVIFLRTVRRDLTRYEELDKEAQAQMNEELSGWKLVVGDVFREPDHPKLLCVMVGDGVQITGMAIVTIIFAALGFMSPASRGMLLTGMIFLFLFLGIAAGYVAVRMWRTIKGTSEGWRSVAWSAACFFPGIVFVILTVLNFVLWGSKSTSALPISLYFVLLSLWFCISVPLTLLGGFFGTRAEENTYPV 705 Y V + +S+I+W SRWD YL M ++HWFSI+NS++V+FFL+GI+ +I +RT+R+D+ Y +KE + E SGWKLV GDVFR P +P +L ++G G+Q+ M ++ I A LG +SP+SRG L+T FLF+F+G+ G+ A R++RT+KG W+ A+ A +PG+VF I VLN +WG S+ A+P LL +WF IS+PL LG +FG R + PV Sbjct: 253 YSVHWEESDIKWASRWDTYLTMSDVQIHWFSIINSVVVVFFLSGILSMIIIRTLRKDIANY---NKEDDIEDTMEESGWKLVHGDVFRPPQYPMILSSLLGSGIQLFCMILIVIFVAMLGMLSPSSRGALMTTACFLFMFMGVFGGFSAGRLYRTLKG--HRWKKGAFCTATLYPGVVFGICFVLNCFIWGKHSSGAVPFPTMVALLCMWFGISLPLVYLGYYFGFRKQPYDNPV 482
BLAST of FC932089 vs. ExPASy Swiss-Prot
Match: TM9S4_HUMAN (Transmembrane 9 superfamily member 4 OS=Homo sapiens GN=TM9SF4 PE=1 SV=2) HSP 1 Score: 220.705 bits (561), Expect = 6.069e-57 Identity = 106/235 (45.11%), Postives = 154/235 (65.53%), Query Frame = 1 Query: 1 YEVEFVKSNIRWPSRWDAYLKMEGARVHWFSILNSLMVIFFLAGIVFVIFLRTVRRDLTRYEELDKEAQAQMNEELSGWKLVVGDVFREPDHPKLLCVMVGDGVQITGMAIVTIIFAALGFMSPASRGMLLTGMIFLFLFLGIAAGYVAVRMWRTIKGTSEGWRSVAWSAACFFPGIVFVILTVLNFVLWGSKSTSALPISLYFVLLSLWFCISVPLTLLGGFFGTRAEENTYPV 705 Y V + +S+I+W SRWD YL M ++HWFSI+NS++V+FFL+GI+ +I +RT+R+D+ Y +KE + E SGWKLV GDVFR P +P +L ++G G+Q+ M ++ I A LG +SP+SRG L+T FLF+F+G+ G+ A R++RT+KG W+ A+ A +PG+VF I VLN +WG S+ A+P LL +WF IS+PL LG +FG R + PV Sbjct: 252 YSVHWEESDIKWASRWDTYLTMSDVQIHWFSIINSVVVVFFLSGILSMIIIRTLRKDIANY---NKEDDIEDTMEESGWKLVHGDVFRPPQYPMILSSLLGSGIQLFCMILIVIFVAMLGMLSPSSRGALMTTACFLFMFMGVFGGFSAGRLYRTLKG--HRWKKGAFCTATLYPGVVFGICFVLNCFIWGKHSSGAVPFPTMVALLCMWFGISLPLVYLGYYFGFRKQPYDNPV 481
BLAST of FC932089 vs. ExPASy Swiss-Prot
Match: TM9S4_BOVIN (Transmembrane 9 superfamily member 4 OS=Bos taurus GN=TM9SF4 PE=2 SV=2) HSP 1 Score: 220.705 bits (561), Expect = 6.069e-57 Identity = 106/235 (45.11%), Postives = 154/235 (65.53%), Query Frame = 1 Query: 1 YEVEFVKSNIRWPSRWDAYLKMEGARVHWFSILNSLMVIFFLAGIVFVIFLRTVRRDLTRYEELDKEAQAQMNEELSGWKLVVGDVFREPDHPKLLCVMVGDGVQITGMAIVTIIFAALGFMSPASRGMLLTGMIFLFLFLGIAAGYVAVRMWRTIKGTSEGWRSVAWSAACFFPGIVFVILTVLNFVLWGSKSTSALPISLYFVLLSLWFCISVPLTLLGGFFGTRAEENTYPV 705 Y V + +S+I+W SRWD YL M ++HWFSI+NS++V+FFL+GI+ +I +RT+R+D+ Y +KE + E SGWKLV GDVFR P +P +L ++G G+Q+ M ++ I A LG +SP+SRG L+T FLF+F+G+ G+ A R++RT+KG W+ A+ A +PG+VF I VLN +WG S+ A+P LL +WF IS+PL LG +FG R + PV Sbjct: 252 YSVHWEESDIKWASRWDTYLTMSDVQIHWFSIINSVVVVFFLSGILSMIIIRTLRKDIANY---NKEDDIEDTMEESGWKLVHGDVFRPPQYPMILSSLLGSGIQLFCMILIVIFVAMLGMLSPSSRGALMTTACFLFMFMGVFGGFSAGRLYRTLKG--HRWKKGAFCTATLYPGVVFGICFVLNCFIWGKHSSGAVPFPTMVALLCMWFGISLPLVYLGYYFGFRKQPYDNPV 481
BLAST of FC932089 vs. ExPASy Swiss-Prot
Match: TM9S2_RAT (Transmembrane 9 superfamily member 2 OS=Rattus norvegicus GN=Tm9sf2 PE=2 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 6.280e-54 Identity = 106/237 (44.73%), Postives = 149/237 (62.87%), Query Frame = 1 Query: 1 YEVEFVKS-NIRWPSRWDAYLK-MEGARVHWFSILNSLMVIFFLAGIVFVIFLRTVRRDLTRYEELDKEAQAQMNEELSGWKLVVGDVFREPDHPKLLCVMVGDGVQITGMAIVTIIFAALGFMSPASRGMLLTGMIFLFLFLGIAAGYVAVRMWRTIKGTSEGWRSVAWSAACFFPGIVFVILTVLNFVLWGSKSTSALPISLYFVLLSLWFCISVPLTLLGGFFGTRAEENTYPV 705 Y + F + NIRW SRWD L+ M + WFSI+NSL+++ FL+G+V +I LRT+ +D+ RY ++D AQ E GWKLV GD+FR P LL V +G G QI M VT+ FA LGF+SPA+RG L+T + L++ LG AGYVA R +++ G E W++ + PGIVF ++N +LWG S++A+P +L+LWFCISVPLT +G +FG + +PV Sbjct: 271 YSISFEEEKNIRWASRWDYILESMPHTHIQWFSIMNSLVIVLFLSGMVAMIMLRTLHKDIARYNQMDSTEDAQ---EEFGWKLVHGDIFRPPRKGMLLSVFLGSGTQILIMTFVTLFFACLGFLSPANRGALMTCAVVLWVLLGTPAGYVAARFYKSFGG--EKWKTNVLLTSFLCPGIVFADFFIMNLILWGEGSSAAIPFGTLVAILALWFCISVPLTFIGAYFGFKKNAIEHPV 502
BLAST of FC932089 vs. ExPASy Swiss-Prot
Match: TM9S2_MOUSE (Transmembrane 9 superfamily member 2 OS=Mus musculus GN=Tm9sf2 PE=2 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 6.280e-54 Identity = 106/237 (44.73%), Postives = 149/237 (62.87%), Query Frame = 1 Query: 1 YEVEFVKS-NIRWPSRWDAYLK-MEGARVHWFSILNSLMVIFFLAGIVFVIFLRTVRRDLTRYEELDKEAQAQMNEELSGWKLVVGDVFREPDHPKLLCVMVGDGVQITGMAIVTIIFAALGFMSPASRGMLLTGMIFLFLFLGIAAGYVAVRMWRTIKGTSEGWRSVAWSAACFFPGIVFVILTVLNFVLWGSKSTSALPISLYFVLLSLWFCISVPLTLLGGFFGTRAEENTYPV 705 Y + F + NIRW SRWD L+ M + WFSI+NSL+++ FL+G+V +I LRT+ +D+ RY ++D AQ E GWKLV GD+FR P LL V +G G QI M VT+ FA LGF+SPA+RG L+T + L++ LG AGYVA R +++ G E W++ + PGIVF ++N +LWG S++A+P +L+LWFCISVPLT +G +FG + +PV Sbjct: 270 YSISFEEEKNIRWASRWDYILESMPHTHIQWFSIMNSLVIVLFLSGMVAMIMLRTLHKDIARYNQMDSTEDAQ---EEFGWKLVHGDIFRPPRKGMLLSVFLGSGTQILIMTFVTLFFACLGFLSPANRGALMTCAVVLWVLLGTPAGYVAARFYKSFGG--EKWKTNVLLTSFLCPGIVFADFFIMNLILWGEGSSAAIPFGTLVAILALWFCISVPLTFIGAYFGFKKNAIEHPV 501
BLAST of FC932089 vs. ExPASy Swiss-Prot
Match: TM9S2_HUMAN (Transmembrane 9 superfamily member 2 OS=Homo sapiens GN=TM9SF2 PE=1 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.827e-53 Identity = 106/237 (44.73%), Postives = 149/237 (62.87%), Query Frame = 1 Query: 1 YEVEFVKSN-IRWPSRWDAYLK-MEGARVHWFSILNSLMVIFFLAGIVFVIFLRTVRRDLTRYEELDKEAQAQMNEELSGWKLVVGDVFREPDHPKLLCVMVGDGVQITGMAIVTIIFAALGFMSPASRGMLLTGMIFLFLFLGIAAGYVAVRMWRTIKGTSEGWRSVAWSAACFFPGIVFVILTVLNFVLWGSKSTSALPISLYFVLLSLWFCISVPLTLLGGFFGTRAEENTYPV 705 Y V F + + IRW SRWD L+ M + WFSI+NSL+++ FL+G+V +I LRT+ +D+ RY ++D AQ E GWKLV GD+FR P LL V +G G QI M VT+ FA LGF+SPA+RG L+T + L++ LG AGYVA R +++ G E W++ + PGIVF ++N +LWG S++A+P +L+LWFCISVPLT +G +FG + +PV Sbjct: 271 YSVSFEEDDKIRWASRWDYILESMPHTHIQWFSIMNSLVIVLFLSGMVAMIMLRTLHKDIARYNQMDSTEDAQ---EEFGWKLVHGDIFRPPRKGMLLSVFLGSGTQILIMTFVTLFFACLGFLSPANRGALMTCAVVLWVLLGTPAGYVAARFYKSFGG--EKWKTNVLLTSFLCPGIVFADFFIMNLILWGEGSSAAIPFGTLVAILALWFCISVPLTFIGAYFGFKKNAIEHPV 502
BLAST of FC932089 vs. ExPASy Swiss-Prot
Match: TM9S2_PONAB (Transmembrane 9 superfamily member 2 OS=Pongo abelii GN=TM9SF2 PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 2.387e-53 Identity = 106/237 (44.73%), Postives = 148/237 (62.45%), Query Frame = 1 Query: 1 YEVEFVKSN-IRWPSRWDAYLK-MEGARVHWFSILNSLMVIFFLAGIVFVIFLRTVRRDLTRYEELDKEAQAQMNEELSGWKLVVGDVFREPDHPKLLCVMVGDGVQITGMAIVTIIFAALGFMSPASRGMLLTGMIFLFLFLGIAAGYVAVRMWRTIKGTSEGWRSVAWSAACFFPGIVFVILTVLNFVLWGSKSTSALPISLYFVLLSLWFCISVPLTLLGGFFGTRAEENTYPV 705 Y V F + IRW SRWD L+ M + WFSI+NSL+++ FL+G+V +I LRT+ +D+ RY ++D AQ E GWKLV GD+FR P LL V +G G QI M VT+ FA LGF+SPA+RG L+T + L++ LG AGYVA R +++ G E W++ + PGIVF ++N +LWG S++A+P +L+LWFCISVPLT +G +FG + +PV Sbjct: 271 YSVSFEEDKKIRWASRWDYILESMPHTHIQWFSIMNSLVIVLFLSGMVAMIMLRTLHKDIARYNQMDSTEDAQ---EEFGWKLVHGDIFRPPRKGMLLSVFLGSGTQILIMTFVTLFFACLGFLSPANRGALMTCAVVLWVLLGTPAGYVAARFYKSFGG--EKWKTNVLLTSFLCPGIVFADFFIMNLILWGEGSSAAIPFGTLVAILALWFCISVPLTFIGAYFGFKKNAIEHPV 502
BLAST of FC932089 vs. ExPASy Swiss-Prot
Match: PHG1A_DICDI (Putative phagocytic receptor 1a OS=Dictyostelium discoideum GN=phg1a PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 5.878e-52 Identity = 100/235 (42.55%), Postives = 144/235 (61.28%), Query Frame = 1 Query: 1 YEVEFVKSNIRWPSRWDAYLKMEGARVHWFSILNSLMVIFFLAGIVFVIFLRTVRRDLTRYEELDKEAQAQMNEELSGWKLVVGDVFREPDHPKLLCVMVGDGVQITGMAIVTIIFAALGFMSPASRGMLLTGMIFLFLFLGIAAGYVAVRMWRTIKGTSEGWRSVAWSAACFFPGIVFVILTVLNFVLWGSKSTSALPISLYFVLLSLWFCISVPLTLLGGFFGTRAEENTYPV 705 YEV++ S + W RWD Y + VHWFSILNSLM++F L +V +I +RT+++D+ RY +D EE +GWK++ GDVFR P HP LL V +G GVQI M ++T+IFA LGF+SPA+ G L T +I LF+ + AGY + R++ KG W+ A PGI+F I +N L G+KS++A+P + ++++WF ISVPL LG +F ++ PV Sbjct: 250 YEVKYTPSPVLWNKRWDIYFESNDNSVHWFSILNSLMIVFILTVMVAMIIIRTLKKDIRRYTSIDTSEDRDSQEE-TGWKMIHGDVFRPPSHPMLLSVCIGSGVQIFSMTLITMIFAVLGFLSPANIGGLATALIVLFVLSAMFAGYFSTRVFTIFKG--RNWKKNTIYTALSMPGIIFGIFFFVNMFLRGAKSSAAVPFGTFASIIAMWFGISVPLVFLGSYFASKKPVPEDPV 481 The following BLAST results are available for this feature:
BLAST of FC932089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932089 ID=FC932089; Name=FC932089; organism=Citrus clementina; type=EST; length=707bpback to top |