FC932091

Overview
NameFC932091
Unique NameFC932091
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length694
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC932091 vs. ExPASy Swiss-Prot
Match: YIPL_SOLTU (Protein yippee-like OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.452e-17
Identity = 39/47 (82.98%), Postives = 43/47 (91.49%), Query Frame = 3 
Query:  150 MGRLFVVNLEGKIYSCKHCRTHLALCEDVVSKPFHCRHGKAYLFSKV 290
            MGRLFV+ LEGKIYSCKHC THLAL E++VSK FHC+HGKAYLFSKV
Sbjct:    1 MGRLFVLTLEGKIYSCKHCGTHLALSENIVSKSFHCKHGKAYLFSKV 47
[Close]
BLAST of FC932091 vs. ExPASy Swiss-Prot
Match: YIPL3_ARATH (Protein yippee-like At3g11230 OS=Arabidopsis thaliana GN=At3g11230 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.312e-16
Identity = 39/47 (82.98%), Postives = 43/47 (91.49%), Query Frame = 3 
Query:  150 MGRLFVVNLEGKIYSCKHCRTHLALCEDVVSKPFHCRHGKAYLFSKV 290
            MGRLF+VNLEGK YSCKHC+T+LALC+DVVSK F  RHGKAYLFSKV
Sbjct:    1 MGRLFLVNLEGKSYSCKHCKTNLALCDDVVSKSFQSRHGKAYLFSKV 47
[Close]
BLAST of FC932091 vs. ExPASy Swiss-Prot
Match: YIPL1_ARATH (Protein yippee-like At3g08990 OS=Arabidopsis thaliana GN=At3g08990 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 6.093e-14
Identity = 30/47 (63.83%), Postives = 40/47 (85.11%), Query Frame = 3 
Query:  150 MGRLFVVNLEGKIYSCKHCRTHLALCEDVVSKPFHCRHGKAYLFSKV 290
            MGRLFV++LEG +YSCK+C+TH A+  D++SK FHC+HG+AYLF  V
Sbjct:    1 MGRLFVIDLEGLVYSCKYCQTHFAVTNDIISKSFHCKHGRAYLFDNV 47
[Close]
BLAST of FC932091 vs. ExPASy Swiss-Prot
Match: YIPL7_ARATH (Protein yippee-like At5g53940 OS=Arabidopsis thaliana GN=At5g53940 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.560e-12
Identity = 30/46 (65.22%), Postives = 38/46 (82.61%), Query Frame = 3 
Query:  150 MGRLFVVNLEGKIYSCKHCRTHLALCEDVVSKPFHCRHGKAYLFSK 287
            MGR+F V LEG+ Y C+ CRTHLAL +D+VS+ FHCR GKAYLF++
Sbjct:    1 MGRIFTVELEGRSYRCRFCRTHLALPDDLVSRSFHCRRGKAYLFNR 46
The following BLAST results are available for this feature:
BLAST of FC932091 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
YIPL_SOLTU3.452e-1782.98Protein yippee-like OS=Solanum tuberosum PE=2 SV=1[more]
YIPL3_ARATH1.312e-1682.98Protein yippee-like At3g11230 OS=Arabidopsis thali... [more]
YIPL1_ARATH6.093e-1463.83Protein yippee-like At3g08990 OS=Arabidopsis thali... [more]
YIPL7_ARATH2.560e-1265.22Protein yippee-like At5g53940 OS=Arabidopsis thali... [more]
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Properties
Property NameValue
Genbank descriptionC34204E09EF PostHarveN Citrus clementina cDNA clone C34204E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932091 ID=FC932091; Name=FC932091; organism=Citrus clementina; type=EST; length=694bp
GTCAGAAAAACAAAATGTGATAACTTTTTGGGCCACATTTCTTGCAAAAC
TAATTTTTTCGTCACATTAAACGGCGACAAGAACAACAACAAGGACTCAG
AAACCAAACCAAAATAGAGAAATCTGTTGGTAGAGTAGTGTGAAGAATTA
TGGGGAGGCTATTTGTGGTGAATCTTGAAGGGAAGATCTATAGCTGCAAG
CACTGCAGGACCCATCTTGCTTTATGTGAAGACGTCGTCTCTAAGCCTTT
CCATTGCAGGCATGGGAAAGCTTATCTCTTCAGTAAGGTGTAAGTTTTCT
AATTTTGGCACCTTATCAATACATGCCAACAAAAGAAATAGAAAAGAAAA
AGAATTCTTTAACATACATTAATTACATTCTCTTAAAATAACTTAATGTC
CGACCTATGACCTGAACAGTTGCCAATGTGATAAGATTACTCATGTTGTT
CAAACTAAAGCCAAAAGAATTCTTGTGGTGCTTTTGAGAAGAGTCAACTG
TATGTACTCTTTAGATATGCGGAAGATGCAGCTTGTATATCTCTTGCAGA
TTCTTGGTCACTGTCTGAAGACGTGAACCACCTCTTTTCCGAGTACATTA
GTACTTATTAGTATATATGTACAGGTGTCTGGTGGATATGGATCATTGTA
GCTCTATAGTAAATTTCCTATTTCTTTCTAATGATANCAGTATT
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