FC932094

Overview
NameFC932094
Unique NameFC932094
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length672
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932094 vs. ExPASy Swiss-Prot
Match: SPS2_CRAPL (Sucrose-phosphate synthase 2 OS=Craterostigma plantagineum GN=SPS2 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.555e-48
Identity = 99/235 (42.13%), Postives = 146/235 (62.13%), Query Frame = 3
Query:    3 RRQMLIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRV-GFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWR------DMVADGDYEAHVEYRWPGENVRSVVPRVAR-AEDG----AEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSKLNVVPLFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHK 671
            RR+ L VIA DCYD  GN  +    +I+ +++A  L   + R  GF L T   + E  + ++   V + DFDA++C+SGSE+Y+P         +  D DY +H+EYRW G+ ++  + ++   AEDG    A   I     +S+S C SY+IK  ++ +KVD++RQ+LRMRG RC+L+Y R  + + VVPL ASR QALRYL +RW + ++ M V +GE GDTDYE+L+ G HK
Sbjct:  788 RRRKLFVIALDCYDLKGNPDKKMILSIQEIVRAVRLDPQMSRFSGFALSTAMPVAELADFLKAGDVKVNDFDALICSSGSEVYYPGTYGEESGKLYLDPDYTSHIEYRWGGDGLKKTISKLMNTAEDGKSSVASSPIELVAKSSNSHCLSYAIKDPSKAKKVDDMRQKLRMRGLRCHLMYCRNSTSMQVVPLLASRSQALRYLFVRWRLSVANMYVILGETGDTDYEELISGTHK 1022          
BLAST of FC932094 vs. ExPASy Swiss-Prot
Match: SPS_MAIZE (Sucrose-phosphate synthase OS=Zea mays GN=SPS PE=1 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.548e-46
Identity = 94/232 (40.52%), Postives = 141/232 (60.78%), Query Frame = 3
Query:    3 RRQMLIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRV-GFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRD--MVADG------DYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSKLNVVPLFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHK 671
            RR+ L VIA DCY  DG  ++     I+ V +A      + ++ GF L T   L ET++ ++   +   DFDA++C SGSE+Y+P     M A+G      DY  H+ +RW  +  R  + ++  A+DG+ D +   V +S++ C ++ IK   + + VD +R+RLRMRG RC+++Y R  ++L VVPL ASR QALRYLS+RWG+ +  M +  GE GDTD E++L GLHK
Sbjct:  776 RRRRLFVIAVDCYQDDGRASKKMLQVIQEVFRAVRSDSQMFKISGFTLSTAMPLSETLQLLQLGKIPATDFDALICGSGSEVYYPGTANCMDAEGKLRPDQDYLMHISHRWSHDGARQTIAKLMGAQDGSGDAVEQDVASSNAHCVAFLIKDPQKVKTVDEMRERLRMRGLRCHIMYCRNSTRLQVVPLLASRSQALRYLSVRWGVSVGNMYLITGEHGDTDLEEMLSGLHK 1007          
BLAST of FC932094 vs. ExPASy Swiss-Prot
Match: SPS_ORYSJ (Probable sucrose-phosphate synthase OS=Oryza sativa subsp. japonica GN=SPS1 PE=2 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 2.385e-44
Identity = 91/232 (39.22%), Postives = 138/232 (59.48%), Query Frame = 3
Query:    3 RRQMLIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRV-GFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRDMVADG--------DYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSKLNVVPLFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHK 671
            RR+ L VIA DCY  DG+ ++     I+ V +A      + R+ GF L T   L ET++ ++   +   DFDA++C SGSE+Y+P      D         DY  H+ +RW  +  +  + ++A   DG+  ++   V++ +  C S+ IK   + R +D +R+R+RMRG RC+L+Y R  ++L VVPL ASR QALRYL +RWG+ +  M + VGE GDTD+E++L GLHK
Sbjct:  794 RRRRLFVIAVDCYGDDGSASKRMLQVIQEVFRAVRSDSQMSRISGFALSTAMPLPETLKLLQLGKIPPTDFDALICGSGSEVYYPSTAQCVDAGGRLRPDQDYLLHINHRWSHDGAKQTIAKLAH--DGSGTNVEPDVESCNPHCVSFFIKDPNKVRTIDEMRERVRMRGLRCHLMYCRNATRLQVVPLLASRSQALRYLFVRWGLSVGNMYLIVGEHGDTDHEEMLSGLHK 1023          
BLAST of FC932094 vs. ExPASy Swiss-Prot
Match: SPS_ORYSI (Probable sucrose-phosphate synthase OS=Oryza sativa subsp. indica GN=SPS1 PE=2 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 2.385e-44
Identity = 91/232 (39.22%), Postives = 138/232 (59.48%), Query Frame = 3
Query:    3 RRQMLIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRV-GFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRDMVADG--------DYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSKLNVVPLFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHK 671
            RR+ L VIA DCY  DG+ ++     I+ V +A      + R+ GF L T   L ET++ ++   +   DFDA++C SGSE+Y+P      D         DY  H+ +RW  +  +  + ++A   DG+  ++   V++ +  C S+ IK   + R +D +R+R+RMRG RC+L+Y R  ++L VVPL ASR QALRYL +RWG+ +  M + VGE GDTD+E++L GLHK
Sbjct:  794 RRRRLFVIAVDCYGDDGSASKRMLQVIQEVFRAVRSDSQMSRISGFALSTAMPLPETLKLLQLGKIPPTDFDALICGSGSEVYYPSTAQCVDAGGRLRPDQDYLLHINHRWSHDGAKQTIAKLAH--DGSGTNVEPDVESCNPHCVSFFIKDPNKVRTIDEMRERVRMRGLRCHLMYCRNATRLQVVPLLASRSQALRYLFVRWGLSVGNMYLIVGEHGDTDHEEMLSGLHK 1023          
BLAST of FC932094 vs. ExPASy Swiss-Prot
Match: SPS_BETVU (Sucrose-phosphate synthase OS=Beta vulgaris GN=SPS PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.637e-43
Identity = 95/233 (40.77%), Postives = 139/233 (59.66%), Query Frame = 3
Query:    3 RRQMLIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPW-----RDMVADGDYEAHVEYRWPGENVRSVVPRVARA-----EDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSKLNVVPLFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHK 671
            RR+++ VIA D     G+  +     ++ +  AAG     G +GFIL T  S+ E    +     N+ DFDA +CNSGSELY+        +++AD DY +H+EYRW GE +R  + R A +      +  E  I    + S+  C ++ IK   +      +R+ +R++  RC+++Y + GSK+NV+P+ ASR QALRYL +RWG++LSKMVVFVGE GDTDYE LL G+HK
Sbjct:  762 RRKLIYVIAVD-----GDYEDGLFDIVRRIFDAAGKEKIEGSIGFILSTSYSMPEIQNYLLSKGFNLHDFDAYICNSGSELYYSSLNSEESNIIADSDYHSHIEYRWGGEGLRRTLLRWAASITEKNGENEEQVITEDEEVSTGYCFAFKIKNQNKVPPTKELRKSMRIQALRCHVIYCQNGSKMNVIPVLASRSQALRYLYVRWGVELSKMVVFVGECGDTDYEGLLGGVHK 989          
BLAST of FC932094 vs. ExPASy Swiss-Prot
Match: SPS1_CITUN (Sucrose-phosphate synthase 1 OS=Citrus unshiu GN=SPS1 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.468e-41
Identity = 96/234 (41.03%), Postives = 140/234 (59.83%), Query Frame = 3
Query:    3 RRQMLIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRD-----MVADGDYEAHVEYRWPGENVRSVVPRVA------RAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSKLNVVPLFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHK 671
            RR+ + VI+ DC     +TT    AT K + +A       G +GFIL T  ++ E    +    ++  DFDA +CNSGS+LY+   +      V D  Y +H+EYRW GE +R  + R A      +AE G E  +      S++ C ++S++    T  V  +R+ LR++  RC+++Y + GS++NV+P+ ASR QALRYL +RWG++LSKMVVFVGE GDTDYE LL G+HK
Sbjct:  772 RRKHIFVISVDC----DSTTGLLDAT-KKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESG-EKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRVNVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHK 999          
BLAST of FC932094 vs. ExPASy Swiss-Prot
Match: SPS_VICFA (Sucrose-phosphate synthase OS=Vicia faba GN=SPS PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.497e-41
Identity = 93/232 (40.09%), Postives = 134/232 (57.76%), Query Frame = 3
Query:    6 RQMLIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPW-----RDMVADGDYEAHVEYRWPGENVRSVVPRVA-----RAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSKLNVVPLFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHK 671
            R  L VIA DC     +TT      IK + +AAG     G VGFIL T  ++ E    +    ++  DFDA +CNSGS+LY+P      R  V D  + +H+EYRW GE +R  + R A     +  +  E  +      S+  C +++++       +  +R+ +R++  RC+ +Y + G++LNV+P+ ASR QALRYL +RWG +LSKMVVFVGE GDTDYE L+ GLHK
Sbjct:  775 RNRLFVIAVDC-----DTTSGLLEMIKLIFEAAGEERAEGSVGFILSTSLTISEIQSFLISGGLSPNDFDAYICNSGSDLYYPSLNSEDRLFVGDLYFHSHIEYRWGGEGLRKTLIRWASSITDKKSENNEQIVSPAEQLSTDYCYAFNVRKAGMAPPLKELRKLMRIQALRCHPIYCQNGTRLNVIPVLASRSQALRYLYVRWGFELSKMVVFVGECGDTDYEGLVGGLHK 1001          
BLAST of FC932094 vs. ExPASy Swiss-Prot
Match: SPS_SPIOL (Sucrose-phosphate synthase OS=Spinacia oleracea GN=SPS1 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.497e-41
Identity = 89/233 (38.20%), Postives = 132/233 (56.65%), Query Frame = 3
Query:    3 RRQMLIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRD-----MVADGDYEAHVEYRWPGENVRSVVPRVA-----RAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSKLNVVPLFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHK 671
            RR+ + VIA DC     + T      IK V+   G     G +GFIL T  +L E    +    +   DFDA +CNSGSELY+P  D      V D DY +H++YRW GE +   + + A     +  + A + ++    +S++ C ++ +           +R+ +R++  RC+ +Y + G++LNV+P+ ASR QALRYL +RWG++LS  VVFVGE GDTDYE LL G+HK
Sbjct:  769 RRKCIFVIALDC-----DVTSDLLQVIKTVISIVGEQRPTGSIGFILSTSMTLSEVDSLLDSGGLRPADFDAFICNSGSELYYPSTDYSESPFVLDQDYYSHIDYRWGGEGLWKTLVKWAASVNEKKGENAPNIVIADETSSTTHCYAFKVNDFTLAPPAKELRKMMRIQALRCHAIYCQNGTRLNVIPVLASRSQALRYLFMRWGVELSNFVVFVGESGDTDYEGLLGGVHK 996          
BLAST of FC932094 vs. ExPASy Swiss-Prot
Match: SPS_SOLTU (Sucrose-phosphate synthase OS=Solanum tuberosum GN=SPS PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.563e-40
Identity = 94/234 (40.17%), Postives = 136/234 (58.12%), Query Frame = 3
Query:    3 RRQMLIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFP-----WRDMVADGDYEAHVEYRWPGENVRSVVPRVARA---EDGAEDD--IVGFVDASSSRCQSYSI-KPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSKLNVVPLFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHK 671
            RR+ + VIA DC  S G        ++K + +A       G +GFIL T  ++ E    +    +N  DFDA +CNSG +LY+          V D  Y +H+EYRW GE +R  + R A +   ++G   D  +V   D S+  C ++ + KPG      + +R+ +R++  RC+ VY + GS++NV+P+ ASR QALRYL +RWG+DLSK+VVFVGE GDTDYE L+ GL K
Sbjct:  768 RRRHIFVIAVDCDASSG-----LSGSVKKIFEAVEKERAEGSIGFILATSFNISEVQSFLLSEGMNPTDFDAYICNSGGDLYYSSFHSEQNPFVVDLYYHSHIEYRWGGEGLRKTLVRWAASIIDKNGENGDHIVVEDEDNSADYCYTFKVCKPGTVPPSKE-LRKVMRIQALRCHAVYCQNGSRINVIPVLASRSQALRYLYLRWGMDLSKLVVFVGESGDTDYEGLIGGLRK 995          
BLAST of FC932094 vs. ExPASy Swiss-Prot
Match: SPS1_CRAPL (Sucrose-phosphate synthase 1 OS=Craterostigma plantagineum GN=SPS1 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.497e-38
Identity = 89/233 (38.20%), Postives = 134/233 (57.51%), Query Frame = 3
Query:    3 RRQMLIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRD-----MVADGDYEAHVEYRWPGENVRSVVPRVARA---EDGAEDD--IVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSKLNVVPLFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHK 671
            RR+++ VIA DC  S G        +++ V  A       G VGFIL T  ++ E    +    +N  DFDA +CNSG +LY+          V D  Y + +EYRW GE +R  + R A +   + G +++  I+   + S+  C S+ ++       V   R+ +R++  RC++VY + G+K+NV+P+ ASR QALRYL +RWG++LSK VV VGE GDTDYE++L G+HK
Sbjct:  768 RRKIMFVIAVDCKPSAG-----LSESVRKVFAAVENERAEGSVGFILATSFNISEIRHFLVSEKLNPTDFDAFICNSGGDLYYSSHHSEDNPFVVDLYYHSQIEYRWGGEGLRKTLVRWAASITDKKGEKEEHVIIEDEETSADYCYSFKVQKPNVVPPVKEARKVMRIQALRCHVVYCQNGNKINVIPVLASRAQALRYLYLRWGMELSKTVVVVGESGDTDYEEMLGGVHK 995          
The following BLAST results are available for this feature:
BLAST of FC932094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
SPS2_CRAPL3.555e-4842.13Sucrose-phosphate synthase 2 OS=Craterostigma plan... [more]
SPS_MAIZE2.548e-4640.52Sucrose-phosphate synthase OS=Zea mays GN=SPS PE=1... [more]
SPS_ORYSJ2.385e-4439.22Probable sucrose-phosphate synthase OS=Oryza sativ... [more]
SPS_ORYSI2.385e-4439.22Probable sucrose-phosphate synthase OS=Oryza sativ... [more]
SPS_BETVU2.637e-4340.77Sucrose-phosphate synthase OS=Beta vulgaris GN=SPS... [more]
SPS1_CITUN2.468e-4141.03Sucrose-phosphate synthase 1 OS=Citrus unshiu GN=S... [more]
SPS_VICFA5.497e-4140.09Sucrose-phosphate synthase OS=Vicia faba GN=SPS PE... [more]
SPS_SPIOL5.497e-4138.20Sucrose-phosphate synthase OS=Spinacia oleracea GN... [more]
SPS_SOLTU3.563e-4040.17Sucrose-phosphate synthase OS=Solanum tuberosum GN... [more]
SPS1_CRAPL1.497e-3838.20Sucrose-phosphate synthase 1 OS=Craterostigma plan... [more]
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Properties
Property NameValue
Genbank descriptionC34204E12EF PostHarveN Citrus clementina cDNA clone C34204E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932094 ID=FC932094; Name=FC932094; organism=Citrus clementina; type=EST; length=672bp
GTAGAAGGCAGATGCTAATTGTAATAGCTGCTGATTGCTATGATAGTGAT
GGCAATACCACAGAGACCTTTCAAGCAACAATTAAGAATGTGATGAAAGC
AGCAGGATTGAGTTTAGGCTTGGGCAGGGTGGGGTTCATACTAGTAACTG
GATCAAGTTTAGGAGAGACTATGGAAGCAATCAGACGTTGCACAGTAAAT
ATTGAGGATTTTGATGCAATTGTTTGCAATAGTGGAAGTGAATTATATTT
TCCATGGAGAGACATGGTAGCTGATGGGGACTATGAAGCTCATGTGGAAT
ACAGATGGCCAGGGGAGAATGTGAGGTCTGTGGTCCCAAGGGTTGCCAGG
GCAGAAGATGGGGCAGAGGATGACATCGTTGGGTTTGTGGATGCGAGCAG
TTCCAGATGCCAATCTTATAGCATAAAACCAGGAGCAGAGACCCGAAAAG
TAGACAATATTCGTCAAAGGCTTCGGATGCGAGGTTTCCGATGCAACCTT
GTCTACACACGTGCAGGATCAAAGTTAAATGTGGTACCATTATTTGCATC
AAGAATACAAGCTCTCAGGTATCTATCAATAAGGTGGGGAATAGATCTTT
CGAAAATGGTTGTTTTTGTGGGTGAAAAAGGAGACACAGACTATGAAGAC
CTGCTGGTCGGCCTCCACAAGA
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