FC932096
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932096 vs. ExPASy Swiss-Prot
Match: MBTP1_RAT (Membrane-bound transcription factor site-1 protease OS=Rattus norvegicus GN=Mbtps1 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.350e-27 Identity = 66/155 (42.58%), Postives = 87/155 (56.13%), Query Frame = 3 Query: 3 DNTRSWWTPVTGGANIPALNDLLAPFGIAFGDKILNGDFSLNGEQSRYASGTDIVRFPGGGNVHSFPFLDTTESGATQNVLTSSTTKADS-PILGLLEV---GEGRIAVYGDSNCLDSSHMVTNCYWLLRKILDFTSANIRDSVLFSDSSKHDTP 455 +NTR WW P TGGAN+PALN+LL+ + + F D + G+F+L YASG I RFP G V + F D VL T D+ PILGL ++ G GRI +YGDSNCLD SH +C+WLL +L +TS + L ++ P Sbjct: 740 ENTRQWWMPDTGGANVPALNELLSVWNMGFSDGLYEGEFALANHDMYYASGCSIARFPEDGVVITQTFKD-----QGLEVLKQETAVVDNVPILGLYQIPAEGGGRIVLYGDSNCLDDSHRQKDCFWLLDALLQYTSYGVTPPSLSHSGNRQRPP 889
BLAST of FC932096 vs. ExPASy Swiss-Prot
Match: MBTP1_HUMAN (Membrane-bound transcription factor site-1 protease OS=Homo sapiens GN=MBTPS1 PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.069e-27 Identity = 72/179 (40.22%), Postives = 95/179 (53.07%), Query Frame = 3 Query: 3 DNTRSWWTPVTGGANIPALNDLLAPFGIAFGDKILNGDFSLNGEQSRYASGTDIVRFPGGGNVHSFPFLDTTESGATQNVLTSSTTKADS-PILGLLEV---GEGRIAVYGDSNCLDSSHMVTNCYWLLRKILDFTSANIRDSVLFSDSSKHDTPLVEDDNQLPSRRTDVNFSSYSAVV 527 +NTR WW P TGGANIPALN+LL+ + + F D + G+F+L YASG I +FP G V + F D VL T ++ PILGL ++ G GRI +YGDSNCLD SH +C+WLL +L +TS + L S S P + P R + YS V+ Sbjct: 740 ENTRQWWMPDTGGANIPALNELLSVWNMGFSDGLYEGEFTLANHDMYYASGCSIAKFPEDGVVITQTFKD-----QGLEVLKQETAVVENVPILGLYQIPAEGGGRIVLYGDSNCLDDSHRQKDCFWLLDALLQYTSYGVTPPSL-SHSGNRQRPPSGAGSVTPERMEGNHLHRYSKVL 912
BLAST of FC932096 vs. ExPASy Swiss-Prot
Match: MBTP1_CRIGR (Membrane-bound transcription factor site-1 protease OS=Cricetulus griseus GN=MBTPS1 PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.930e-27 Identity = 65/155 (41.94%), Postives = 87/155 (56.13%), Query Frame = 3 Query: 3 DNTRSWWTPVTGGANIPALNDLLAPFGIAFGDKILNGDFSLNGEQSRYASGTDIVRFPGGGNVHSFPFLDTTESGATQNVLTSSTTKADS-PILGLLEV---GEGRIAVYGDSNCLDSSHMVTNCYWLLRKILDFTSANIRDSVLFSDSSKHDTP 455 +NTR WW P TGGANIPALN+LL+ + + F D + G+F+L YASG I +FP G V + F D VL T ++ PILGL ++ G GRI +YGDSNCLD SH +C+WLL +L +TS + L ++ P Sbjct: 740 ENTRQWWMPDTGGANIPALNELLSVWNMGFSDGLYEGEFALANHDMYYASGCSIAKFPEDGVVITQTFKD-----QGLEVLKQETAVVENVPILGLYQIPAEGGGRIVLYGDSNCLDDSHRQKDCFWLLDALLQYTSYGVNPPSLSHSGNRQRPP 889
BLAST of FC932096 vs. ExPASy Swiss-Prot
Match: MBTP1_MOUSE (Membrane-bound transcription factor site-1 protease OS=Mus musculus GN=Mbtps1 PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.598e-26 Identity = 65/155 (41.94%), Postives = 86/155 (55.48%), Query Frame = 3 Query: 3 DNTRSWWTPVTGGANIPALNDLLAPFGIAFGDKILNGDFSLNGEQSRYASGTDIVRFPGGGNVHSFPFLDTTESGATQNVLTSSTTKADS-PILGLLEV---GEGRIAVYGDSNCLDSSHMVTNCYWLLRKILDFTSANIRDSVLFSDSSKHDTP 455 +NTR WW P TGGANIPALN+LL+ + + F D + G+F L YASG I +FP G V + F D VL T ++ PILGL ++ G GRI +YGDSNCLD SH +C+WLL +L +TS + L ++ P Sbjct: 740 ENTRQWWMPDTGGANIPALNELLSVWNMGFSDGLYEGEFVLANHDMYYASGCSIAKFPEDGVVITQTFKD-----QGLEVLKQETAVVENVPILGLYQIPSEGGGRIVLYGDSNCLDDSHRQKDCFWLLDALLQYTSYGVTPPSLSHSGNRQRPP 889 The following BLAST results are available for this feature:
BLAST of FC932096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932096 ID=FC932096; Name=FC932096; organism=Citrus clementina; type=EST; length=730bpback to top |