FC932107
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932107 vs. ExPASy Swiss-Prot
Match: ARD4_ARATH (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 4 OS=Arabidopsis thaliana GN=ARD4 PE=2 SV=1) HSP 1 Score: 330.487 bits (846), Expect = 6.365e-90 Identity = 150/187 (80.21%), Postives = 167/187 (89.30%), Query Frame = 1 Query: 52 MVLEAWFMDESSQDQRLPHHLNPKQFVSLDQLAELGVLYWRLNPKNYENDEELQKIREARGYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNRPQEDHPARKEYIKGLTGQAGVPVEAH 612 M LEAWFMD+S++DQRLPHH NPK+ VSLD LAELGVLYW+LNP+NYEND EL KIRE RGY YMDLLDLCPEKV+NYEEKLKNF+TEHIH DEEIRYCL GSGYFDVRD+ D+WIRIW++ GDLIVLPAGIYHRFTLD SNY+KLMRLFVGEPVWT YNRPQE+HP RK+YI GLT + G V+AH Sbjct: 1 MALEAWFMDDSNEDQRLPHHRNPKELVSLDYLAELGVLYWKLNPENYENDSELSKIREDRGYDYMDLLDLCPEKVSNYEEKLKNFFTEHIHKDEEIRYCLAGSGYFDVRDKDDRWIRIWMQPGDLIVLPAGIYHRFTLDASNYIKLMRLFVGEPVWTPYNRPQEEHPVRKKYIHGLTYKFGETVKAH 187
BLAST of FC932107 vs. ExPASy Swiss-Prot
Match: ARD2_ORYSJ (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 OS=Oryza sativa subsp. japonica GN=ARD2 PE=2 SV=1) HSP 1 Score: 284.648 bits (727), Expect = 4.006e-76 Identity = 123/180 (68.33%), Postives = 153/180 (85.00%), Query Frame = 1 Query: 55 VLEAWFMDESSQDQRLPHHLNPKQFVSLDQLAELGVLYWRLNPKNYENDEELQKIREARGYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNRPQEDHPARKEYIKGLTGQAG 594 V+EAW+MD+S +DQRLPHH PK+F+ L +L+ELG+L WRLN ++ENDE L+KIREARGYSYMD+ D+CPEK+ NYE KLKNF+ EH+H DEEIRYCLEGSGYFDVRD++DQWIR+ +K G +IVLPAG+YHRFTLD+ NY+K MRLFVGEPVWT YNRP + PARKEY++ + + G Sbjct: 12 VIEAWYMDDSEEDQRLPHHREPKEFIPLSKLSELGILSWRLNADDWENDENLKKIREARGYSYMDICDVCPEKLPNYEAKLKNFFEEHLHTDEEIRYCLEGSGYFDVRDQNDQWIRVAVKKGGMIVLPAGMYHRFTLDSDNYIKAMRLFVGEPVWTPYNRPHDHLPARKEYVEKIINRGG 191
BLAST of FC932107 vs. ExPASy Swiss-Prot
Match: ARD2_ORYSI (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 OS=Oryza sativa subsp. indica GN=ARD2 PE=2 SV=2) HSP 1 Score: 284.648 bits (727), Expect = 4.006e-76 Identity = 123/180 (68.33%), Postives = 153/180 (85.00%), Query Frame = 1 Query: 55 VLEAWFMDESSQDQRLPHHLNPKQFVSLDQLAELGVLYWRLNPKNYENDEELQKIREARGYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNRPQEDHPARKEYIKGLTGQAG 594 V+EAW+MD+S +DQRLPHH PK+F+ L +L+ELG+L WRLN ++ENDE L+KIREARGYSYMD+ D+CPEK+ NYE KLKNF+ EH+H DEEIRYCLEGSGYFDVRD++DQWIR+ +K G +IVLPAG+YHRFTLD+ NY+K MRLFVGEPVWT YNRP + PARKEY++ + + G Sbjct: 12 VIEAWYMDDSEEDQRLPHHREPKEFIPLSKLSELGILSWRLNADDWENDENLKKIREARGYSYMDICDVCPEKLPNYEAKLKNFFEEHLHTDEEIRYCLEGSGYFDVRDQNDQWIRVAVKKGGMIVLPAGMYHRFTLDSDNYIKAMRLFVGEPVWTPYNRPHDHLPARKEYVEKIINRGG 191
BLAST of FC932107 vs. ExPASy Swiss-Prot
Match: ARD1_ORYSJ (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1 OS=Oryza sativa subsp. japonica GN=ARD1 PE=2 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 3.749e-74 Identity = 121/180 (67.22%), Postives = 151/180 (83.89%), Query Frame = 1 Query: 55 VLEAWFMDESSQDQRLPHHLNPKQFVSLDQLAELGVLYWRLNPKNYENDEELQKIREARGYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNRPQEDHPARKEYIKGLTGQAG 594 V+EAW+MD+S +DQRLPHH PK+F+ +D+L ELGV+ WRLNP N+EN E L++IREARGYSY+D+ D+CPEK+ NYE K+K+F+ EH+H DEEIRYCLEGSGYFDVRD++DQWIRI +K G +IVLPAG+YHRFTLDT NY+K MRLFVG+PVWT YNRP + PARKE++ L G Sbjct: 12 VIEAWYMDDSEEDQRLPHHREPKEFIHVDKLTELGVISWRLNPDNWENCENLKRIREARGYSYVDICDVCPEKLPNYETKIKSFFEEHLHTDEEIRYCLEGSGYFDVRDQNDQWIRIALKKGGMIVLPAGMYHRFTLDTDNYIKAMRLFVGDPVWTPYNRPHDHLPARKEFLAKLLKSEG 191
BLAST of FC932107 vs. ExPASy Swiss-Prot
Match: ARD1_ORYSI (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1 OS=Oryza sativa subsp. indica GN=ARD1 PE=1 SV=2) HSP 1 Score: 278.1 bits (710), Expect = 3.749e-74 Identity = 121/180 (67.22%), Postives = 151/180 (83.89%), Query Frame = 1 Query: 55 VLEAWFMDESSQDQRLPHHLNPKQFVSLDQLAELGVLYWRLNPKNYENDEELQKIREARGYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNRPQEDHPARKEYIKGLTGQAG 594 V+EAW+MD+S +DQRLPHH PK+F+ +D+L ELGV+ WRLNP N+EN E L++IREARGYSY+D+ D+CPEK+ NYE K+K+F+ EH+H DEEIRYCLEGSGYFDVRD++DQWIRI +K G +IVLPAG+YHRFTLDT NY+K MRLFVG+PVWT YNRP + PARKE++ L G Sbjct: 12 VIEAWYMDDSEEDQRLPHHREPKEFIHVDKLTELGVISWRLNPDNWENCENLKRIREARGYSYVDICDVCPEKLPNYETKIKSFFEEHLHTDEEIRYCLEGSGYFDVRDQNDQWIRIALKKGGMIVLPAGMYHRFTLDTDNYIKAMRLFVGDPVWTPYNRPHDHLPARKEFLAKLLKSEG 191
BLAST of FC932107 vs. ExPASy Swiss-Prot
Match: ARD3_ARATH (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 3 OS=Arabidopsis thaliana GN=ARD3 PE=2 SV=1) HSP 1 Score: 277.33 bits (708), Expect = 6.395e-74 Identity = 119/172 (69.19%), Postives = 149/172 (86.63%), Query Frame = 1 Query: 55 VLEAWFMDESSQDQRLPHHLNPKQFVSLDQLAELGVLYWRLNPKNYENDEELQKIREARGYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNRPQEDHPARKEYI 570 V++AW+MD+S +DQRLPHH +PK+F+SLD+LAELGVL WRL+ NYE DE+L+KIRE+RGYSYMD ++CPEK+ NYE K+K+F+ EH+H DEEIRYC+ GSGYFDVRD ++ WIR+W+K G +IVLPAGIYHRFT+D+ NY+K MRLFVGEPVWT YNRP + PARKEYI Sbjct: 12 VIQAWYMDDSEEDQRLPHHKDPKEFLSLDKLAELGVLSWRLDADNYETDEDLKKIRESRGYSYMDFCEVCPEKLPNYEVKVKSFFEEHLHTDEEIRYCVAGSGYFDVRDRNEAWIRVWVKKGGMIVLPAGIYHRFTVDSDNYIKAMRLFVGEPVWTPYNRPHDHLPARKEYI 183
BLAST of FC932107 vs. ExPASy Swiss-Prot
Match: ARD1_ARATH (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1 OS=Arabidopsis thaliana GN=ARD1 PE=2 SV=1) HSP 1 Score: 273.478 bits (698), Expect = 9.234e-73 Identity = 120/173 (69.36%), Postives = 147/173 (84.97%), Query Frame = 1 Query: 55 VLEAWFMDESSQDQRLPHHLNPKQFVSLDQLAELGVLYWRLNPKNYENDEELQKIREARGYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNRPQEDHPARKEYIK 573 V++AW++D +DQ+LPHH +PK+FVSLD+LAELGVL WRL+ NYE DEEL++IRE+RGYSYMDL ++CPEK+ NYEEK+K F+ EH+H DEEIRYCL GSGYFDVRD +D WIR+W+K G LIV PAGIYHRFT+D+ NY+K MRLFVG PVWTAYNRP + PARK Y+K Sbjct: 12 VIQAWYLDNKEEDQKLPHHKDPKEFVSLDKLAELGVLCWRLDADNYETDEELKRIRESRGYSYMDLCEVCPEKLPNYEEKVKMFFEEHLHIDEEIRYCLAGSGYFDVRDLNDIWIRVWVKKGGLIVFPAGIYHRFTVDSDNYMKAMRLFVGGPVWTAYNRPHDHLPARKAYMK 184
BLAST of FC932107 vs. ExPASy Swiss-Prot
Match: ARD2_ARATH (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 OS=Arabidopsis thaliana GN=ARD2 PE=2 SV=1) HSP 1 Score: 271.937 bits (694), Expect = 2.687e-72 Identity = 117/172 (68.02%), Postives = 148/172 (86.05%), Query Frame = 1 Query: 55 VLEAWFMDESSQDQRLPHHLNPKQFVSLDQLAELGVLYWRLNPKNYENDEELQKIREARGYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNRPQEDHPARKEYI 570 V++AW+MD+S +DQRLPHH +PK+FVSLD+LAELGVL WRL+ NYE DE+L+KIRE+RGYSYMD ++CPEK+ NYE K+K+F+ EH+H DEEIRYC+ G+GYFDVRD ++ WIR+ +K G +IVLPAGIYHRFT+D+ NY+K MRLFVGEPVWT YNRP + PARKEY+ Sbjct: 12 VIQAWYMDDSEEDQRLPHHKDPKEFVSLDKLAELGVLSWRLDADNYETDEDLKKIRESRGYSYMDFCEVCPEKLPNYEVKVKSFFEEHLHTDEEIRYCVAGTGYFDVRDRNEAWIRVLVKKGGMIVLPAGIYHRFTVDSDNYIKAMRLFVGEPVWTPYNRPHDHLPARKEYV 183
BLAST of FC932107 vs. ExPASy Swiss-Prot
Match: ARD4_ORYSJ (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 4 OS=Oryza sativa subsp. japonica GN=ARD4 PE=2 SV=1) HSP 1 Score: 269.24 bits (687), Expect = 1.742e-71 Identity = 117/182 (64.29%), Postives = 147/182 (80.77%), Query Frame = 1 Query: 67 WFMDESSQDQRLPHHLNPKQFVSLDQLAELGVLYWRLNPKNYENDEELQKIREARGYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNRPQEDHPARKEYIKGLTGQAGVPVEAH 612 W + E+ +++ NP + + L +L E+GVLYW L+PK E++EEL KIR RGYSY DL ++CP+K+ NYEEKLK+FY EHIHADEEIRYCLEGSGYFDVRD+ D+WIRIWIK GD+I+LPAGIYHRF +D++NY+KLMRLF+GEPVWTAYNRPQEDHP R+EY+K + G G + AH Sbjct: 6 WMLGENGEEKSFE---NPNELLPLSRLEEIGVLYWHLDPKKSESEEELTKIRRERGYSYFDLTEICPDKLENYEEKLKSFYCEHIHADEEIRYCLEGSGYFDVRDKDDKWIRIWIKEGDMIILPAGIYHRFIVDSNNYIKLMRLFIGEPVWTAYNRPQEDHPVRQEYVKNVKGDTGFALAAH 184
BLAST of FC932107 vs. ExPASy Swiss-Prot
Match: MTND_CHICK (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Gallus gallus GN=ADI1 PE=2 SV=1) HSP 1 Score: 250.366 bits (638), Expect = 8.372e-66 Identity = 114/179 (63.69%), Postives = 143/179 (79.89%), Query Frame = 1 Query: 55 VLEAWFMDESSQDQRLPHHLNPKQFVSLDQLAELGVLYWRLNPKNYENDEELQKIREARGYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNRPQEDHPARKEYIKGLTGQA 591 ++EAW+MDES +DQR PH L P + VSL+QL LGV Y RL+ NYE D L++IREA YS+MD++ + +K+ NYEEK+K FY EH+H D+EIRY L+GSGYFDVRD+ D+WIRI ++ GD+I LPAGIYHRFTLD +NYVK MRLFVGEPVWTAYNRP +D PARK+Y+K L +A Sbjct: 1 MVEAWYMDESQEDQRAPHRLQPNRAVSLEQLRRLGVAYRRLDADNYETDPRLKEIREAENYSWMDIVTIHKDKLPNYEEKIKTFYEEHLHLDDEIRYILDGSGYFDVRDKDDKWIRISMEKGDMITLPAGIYHRFTLDENNYVKAMRLFVGEPVWTAYNRPADDFPARKQYMKFLAEEA 179 The following BLAST results are available for this feature:
BLAST of FC932107 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932107 ID=FC932107; Name=FC932107; organism=Citrus clementina; type=EST; length=778bpback to top |