FC932109
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932109 vs. ExPASy Swiss-Prot
Match: BI1L_ARATH (BI1-like protein OS=Arabidopsis thaliana GN=At4g15470 PE=2 SV=1) HSP 1 Score: 276.174 bits (705), Expect = 1.311e-73 Identity = 148/237 (62.45%), Postives = 167/237 (70.46%), Query Frame = 2 Query: 44 KMLGYETVR----SKDDGKFEVDLEGGDGER-LYPGLSYGENQLRWGFIRKVYGILTAQIVLATLVSSITVLYNPINDXXXXXXXXXXXXXXXXXXXXXXXHVYHQKHPVNLIVLGLFTVSLSLPVAVSCANTDGRIVLEALILTSAVVCSLTGYTFWASKKGKDFSFLGPXXXXXXXXXXXXXXMQMFFPLGSTSTAVYGGISALVFCGYIVYDTDXLIKRFTYDDYILASVTLYL 739 K GY +V + GK ++DLE G GE LYPGLSYGENQLRWGFIRKVYGIL+AQ++L TL+S++ VL P+ND H+YHQKHPVNLI+L LFTVSLS V VSCA T+GRIVL+ALILT +VV SLT YTFWA+KKGKDFSFLGP +QMFFPLG TS AVYGG SALVFCGYIVYDTD LIKRFTYD+YILASV LYL Sbjct: 3 KPYGYASVSMSGIDRSAGK-DIDLEMGVGEATLYPGLSYGENQLRWGFIRKVYGILSAQLLLTTLISAVVVLNPPVNDLLTGSPGILLFLCIVPFILIWPLHIYHQKHPVNLILLALFTVSLSFTVGVSCAMTEGRIVLQALILTLSVVGSLTAYTFWAAKKGKDFSFLGPILFTSLIILVVTSFIQMFFPLGPTSVAVYGGFSALVFCGYIVYDTDNLIKRFTYDEYILASVALYL 238
BLAST of FC932109 vs. ExPASy Swiss-Prot
Match: TMBI4_MOUSE (Transmembrane BAX inhibitor motif-containing protein 4 OS=Mus musculus GN=Tmbim4 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.862e-21 Identity = 58/194 (29.90%), Postives = 98/194 (50.52%), Query Frame = 2 Query: 158 LRWGFIRKVYGILTAQIVLATLVSSITVLYNPINDXXXXXXXXXXXXXXXXXXXXXXXHVYHQKHPVNLIVLGLFTVSLSLPVAVSCANTDGRIVLEALILTSAVVCSLTGYTFWASKKGKDFSFLGPXXXXXXXXXXXXXXMQMFFPLGSTSTAVYGGISALVFCGYIVYDTDXLIKRFTYDDYILASVTLYL 739 +R F+RKVY IL+ Q++L T+ S++ + + + ++ HP+NL +L FT+S SL VA D +VL+A I+T+AV LT YT + + DF+ G +++FF T V + AL+FCG+I+YDT L+ R + ++Y++A+++LY+ Sbjct: 30 IRMAFLRKVYSILSLQVLLTTVTSALFLYFQALRTFVHESPALIVVFALGSLGLIFALTLHRHTHPLNLYLLFAFTLSESLAVAAVVTFYDVYLVLQAFIMTTAVFLGLTAYTLQSKR---DFTKFGAGLFAGLWILCLAGFLKLFF-YSETMELVLASLGALLFCGFIIYDTHSLMHRLSPEEYVIAAISLYM 219
BLAST of FC932109 vs. ExPASy Swiss-Prot
Match: TMBI4_HUMAN (Transmembrane BAX inhibitor motif-containing protein 4 OS=Homo sapiens GN=TMBIM4 PE=1 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.575e-18 Identity = 59/194 (30.41%), Postives = 94/194 (48.45%), Query Frame = 2 Query: 158 LRWGFIRKVYGILTAQIVLATLVSSITVLYNPINDXXXXXXXXXXXXXXXXXXXXXXXHVYHQKHPVNLIVLGLFTVSLSLPVAVSCANTDGRIVLEALILTSAVVCSLTGYTFWASKKGKDFSFLGPXXXXXXXXXXXXXXMQMFFPLGSTSTAVYGGISALVFCGYIVYDTDXLIKRFTYDDYILASVTLYL 739 +R F+RKVY IL+ Q++L T+ S++ + + + + K+P+NL +L FT+ +L VAV D I+L+A ILT+ V LT YT + K DFS G ++ FF V AL+FCG+I+YDT L+ + + ++Y+LA+++LYL Sbjct: 30 IRMAFLRKVYSILSLQVLLTTVTSTVFLYFESVRTFVHESPALILLFALGSLGLIFALTLNRHKYPLNLYLLFGFTLLEALTVAVVVTFYDVYIILQAFILTTTVFFGLTVYTLQSKK---DFSKFGAGLFALLWILCLSGFLKFFF-YSEIMELVLAAAGALLFCGFIIYDTHSLMHKLSPEEYVLAAISLYL 219
BLAST of FC932109 vs. ExPASy Swiss-Prot
Match: YQE4_SCHPO (Uncharacterized membrane protein C576.04 OS=Schizosaccharomyces pombe GN=SPCC576.04 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.552e-16 Identity = 56/194 (28.87%), Postives = 87/194 (44.85%), Query Frame = 2 Query: 158 LRWGFIRKVYGILTAQIVLATLVSSITVLYNPINDXXXXXXXXXXXXXXXXXXXXXXXHVYHQKHPVNLIVLGLFTVSLSLPVAVSCANTDGRIVLEALILTSAVVCSLTGYTFWASKKGKDFSFLGPXXXXXXXXXXXXXXMQMFFPLGSTSTAVYGGISALVFCGYIVYDTDXLIKRFTYDDYILASVTLYL 739 +R F+RKVY ILTAQ+ + +L I L+ + + +P N I L LFT L + + RI+LEA+ +T V +LT +TF + DFS LG + F P + G LVFCGYI++DT ++ R++ +++I++S+ LYL Sbjct: 54 IRMAFLRKVYAILTAQLFVTSLFGGIFYLHPAFSFWVQMHPWFLILNFFISLVVLFGLIMKPYSYPRNYIFLFLFTALEGLTLGTAITFFSARIILEAVFITLGVFVALTAFTFQSKW---DFSRLGGFLYVSLWSLILTPLIFFFVPSTPFIDMAFAGFGTLVFCGYILFDTYNILHRYSPEEFIMSSLMLYL 244
BLAST of FC932109 vs. ExPASy Swiss-Prot
Match: TMBI4_CAEEL (Transmembrane BAX inhibitor motif-containing protein 4 OS=Caenorhabditis elegans GN=tmbi-4 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 8.368e-12 Identity = 54/210 (25.71%), Postives = 88/210 (41.90%), Query Frame = 2 Query: 113 DGERLYPG-LSYGENQLRWGFIRKVYGILTAQIVLATLVSSITVLYNPINDXXXXXXXXXXXXXXXXXXXXXXXHVYHQKHPVNLIVLGLFTVSLSLPVAVSCANTDGRIVLEALILTSAVVCSLTGYTFWASKKGKDFSFLGPXXXXXXXXXXXXXXMQMFFPLGSTSTAVYGGISALVFCGYIVYDTDXLIKRFTYDDYILASVTLYL 739 D + + PG + +R F+RKV GI+ Q++ + + N HVY ++ P+N ++L FT ++ + + ++VLEA ++T VV SL YT + +DFS QMFF + V A +FC +V D D ++ RF+ +DYI A V+LY+ Sbjct: 53 DADGILPGCVGKANRMIRIAFLRKVLGIVGFQLLFTIGICAAIYNIPNSNQLLQKHAWIVFPNLLGSIALIIALHVYAREVPLNYVLLAAFTAVQAVTMGCVVTLFEAKVVLEAAVITGLVVASLFAYTL---QNKRDFSVGYASMGSLLCVLLWAGIFQMFF-MSPAVNFVINVFGAGLFCVLLVIDLDMIMYRFSPEDYICACVSLYM 258 The following BLAST results are available for this feature:
BLAST of FC932109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932109 ID=FC932109; Name=FC932109; organism=Citrus clementina; type=EST; length=739bpback to top |