FC932177
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932177 vs. ExPASy Swiss-Prot
Match: MDHP_ARATH (Malate dehydrogenase, chloroplastic OS=Arabidopsis thaliana GN=At3g47520 PE=1 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 7.584e-42 Identity = 100/157 (63.69%), Postives = 117/157 (74.52%), Query Frame = 2 Query: 236 KAGQLPQSKPSGVRFNSKKSLVSFSGLKAVTSVICESDTSFLNKESCSALRSTFARKAQSSEQRPQNALQPQASFKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNVVVIPAGVQEKLG 706 KA +P S+ V+FNS + SF+GLK+ TS+I SD+S L K LR + KAQ+S+++P + AS+KVAVLGAAGGIGQPL+LLIKMSPLVS LHLYD+ NVKGVAADLSHCNTPSQV DFTGP ELA LK VNVVVIPAGV K G Sbjct: 19 KASSIPHSRLQSVKFNS---VPSFTGLKS-TSLISGSDSSSLAK----TLRGSVT-KAQTSDKKPYG-FKINASYKVAVLGAAGGIGQPLSLLIKMSPLVSTLHLYDIANVKGVAADLSHCNTPSQVRDFTGPSELADCLKDVNVVVIPAGVPRKPG 165
BLAST of FC932177 vs. ExPASy Swiss-Prot
Match: MDHM_FRAAN (Malate dehydrogenase, mitochondrial OS=Fragaria ananassa GN=MMDHI PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.201e-24 Identity = 64/116 (55.17%), Postives = 78/116 (67.24%), Query Frame = 2 Query: 365 KESCSALRST--FARKAQSSEQRPQNALQPQASFKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNVVVIPAGVQEKLG 706 + S S +RS AR+ SSE PQ KVAVLGAAGGIGQPLALL+K++PLVS L LYD+ GVAAD+SH NT S+V + G E+L AL+G +VV+IPAGV K G Sbjct: 2 RPSMSLIRSVSRVARRGYSSESVPQR--------KVAVLGAAGGIGQPLALLMKLNPLVSQLSLYDIAGTPGVAADVSHINTRSEVKGYAGEEQLGEALEGCDVVIIPAGVPRKPG 109
BLAST of FC932177 vs. ExPASy Swiss-Prot
Match: MDHM_EUCGU (Malate dehydrogenase, mitochondrial OS=Eucalyptus gunnii GN=MDH PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.075e-23 Identity = 60/115 (52.17%), Postives = 76/115 (66.09%), Query Frame = 2 Query: 362 NKESCSALRSTFARKAQSSEQRPQNALQPQASFKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNVVVIPAGVQEKLG 706 ++ S +A R R+A SE P+ KVAVLGAAGGIGQPLALL+K++PLVS L LYD+ GVAAD+ H NT S+V + G E+L AL+G +VV+IPAGV K G Sbjct: 11 SRSSSAAPRPHLLRRAYGSESVPER--------KVAVLGAAGGIGQPLALLMKLNPLVSQLALYDIAGTPGVAADVGHINTRSEVAGYVGEEQLGQALEGSDVVIIPAGVPRKPG 117
BLAST of FC932177 vs. ExPASy Swiss-Prot
Match: MDHM_BRANA (Malate dehydrogenase, mitochondrial OS=Brassica napus GN=MDH PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.075e-23 Identity = 62/118 (52.54%), Postives = 81/118 (68.64%), Query Frame = 2 Query: 353 SFLNKESCSALRSTFARKAQSSEQRPQNALQPQASFKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNVVVIPAGVQEKLG 706 S L + S SA +S R++ SS P+ KVA+LGAAGGIGQPLALL+K++PLVS+L LYD+ N GVAAD+ H NT SQV+ + G + LA AL+G ++V+IPAGV K G Sbjct: 4 SALVRSSASAKQSLL-RRSFSSGSVPER--------KVAILGAAGGIGQPLALLMKLNPLVSSLSLYDIANTPGVAADVGHINTRSQVVGYMGDDNLAKALEGADLVIIPAGVPRKPG 112
BLAST of FC932177 vs. ExPASy Swiss-Prot
Match: MDHG_ORYSJ (Malate dehydrogenase, glyoxysomal OS=Oryza sativa subsp. japonica GN=Os12g0632700 PE=1 SV=3) HSP 1 Score: 108.997 bits (271), Expect = 2.710e-23 Identity = 60/112 (53.57%), Postives = 77/112 (68.75%), Query Frame = 2 Query: 377 SALRSTFARKAQSSEQRPQNALQPQAS--FKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNVVVIPAGVQEKLG 706 S LR ++ +S R N A+ FKVA+LGA+GGIGQPLALL+KM+PLVS LHLYDV+N GV AD+SH NT + V F G +L +AL G+++V+IPAGV K G Sbjct: 16 SHLRPPASQMEESPLLRGSNCRAKGAAPGFKVAILGASGGIGQPLALLMKMNPLVSVLHLYDVVNTPGVTADISHMNTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPG 127
BLAST of FC932177 vs. ExPASy Swiss-Prot
Match: MDHM1_ARATH (Malate dehydrogenase 1, mitochondrial OS=Arabidopsis thaliana GN=At1g53240 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.622e-23 Identity = 60/118 (50.85%), Postives = 81/118 (68.64%), Query Frame = 2 Query: 353 SFLNKESCSALRSTFARKAQSSEQRPQNALQPQASFKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNVVVIPAGVQEKLG 706 S L + S SA ++ R++ SS P+ KVA+LGAAGGIGQPLALL+K++PLVS+L LYD+ N GVAAD+ H NT S+V+ + G + LA AL+G ++V+IPAGV K G Sbjct: 4 SMLVRSSASAKQAVI-RRSFSSGSVPER--------KVAILGAAGGIGQPLALLMKLNPLVSSLSLYDIANTPGVAADVGHINTRSEVVGYMGDDNLAKALEGADLVIIPAGVPRKPG 112
BLAST of FC932177 vs. ExPASy Swiss-Prot
Match: MDHG_CUCSA (Malate dehydrogenase, glyoxysomal OS=Cucumis sativus GN=MDHG PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.884e-23 Identity = 53/83 (63.86%), Postives = 66/83 (79.52%), Query Frame = 2 Query: 458 FKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNVVVIPAGVQEKLG 706 FKVA+LGAAGGIGQPLA+L+KM+PLVS LHLYDV+N GV AD+SH +T + V F G ++L AL G+++VVIPAGV K G Sbjct: 45 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLERALTGMDLVVIPAGVPRKPG 127
BLAST of FC932177 vs. ExPASy Swiss-Prot
Match: MDHM_HUMAN (Malate dehydrogenase, mitochondrial OS=Homo sapiens GN=MDH2 PE=1 SV=3) HSP 1 Score: 107.071 bits (266), Expect = 1.030e-22 Identity = 61/118 (51.69%), Postives = 77/118 (65.25%), Query Frame = 2 Query: 353 SFLNKESCSALRSTFARKAQSSEQRPQNALQPQASFKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNVVVIPAGVQEKLG 706 S L + + +ALR +F+ AQ++ KVAVLGA+GGIGQPL+LL+K SPLVS L LYD+ + GVAADLSH T + V + GPE+L LKG +VVVIPAGV K G Sbjct: 3 SALARPASAALRRSFSTSAQNNA-------------KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETKAAVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPG 107
BLAST of FC932177 vs. ExPASy Swiss-Prot
Match: MDHG_CITLA (Malate dehydrogenase, glyoxysomal OS=Citrullus lanatus PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.030e-22 Identity = 50/83 (60.24%), Postives = 67/83 (80.72%), Query Frame = 2 Query: 458 FKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNVVVIPAGVQEKLG 706 FKVA+LGAAGGIGQPLA+L+KM+PLVS LHLYDV+N GV AD+SH +T + V F G ++L +AL G++++++PAGV K G Sbjct: 45 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAGVPRKPG 127
BLAST of FC932177 vs. ExPASy Swiss-Prot
Match: MDHM_MACFA (Malate dehydrogenase, mitochondrial OS=Macaca fascicularis GN=MDH2 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.345e-22 Identity = 61/118 (51.69%), Postives = 77/118 (65.25%), Query Frame = 2 Query: 353 SFLNKESCSALRSTFARKAQSSEQRPQNALQPQASFKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNVVVIPAGVQEKLG 706 S L + + +ALR +F+ AQ++ KVAVLGA+GGIGQPL+LL+K SPLVS L LYD+ + GVAADLSH T + V + GPE+L LKG +VVVIPAGV K G Sbjct: 3 SALARPASAALRRSFSTSAQNNA-------------KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETKAVVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPG 107 The following BLAST results are available for this feature:
BLAST of FC932177 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 147
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932177 ID=FC932177; Name=FC932177; organism=Citrus clementina; type=EST; length=730bpback to top |