FC932188
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932188 vs. ExPASy Swiss-Prot
Match: KASC1_ARATH (3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Arabidopsis thaliana GN=KAS1 PE=2 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 9.460e-19 Identity = 55/162 (33.95%), Postives = 86/162 (53.09%), Query Frame = 1 Query: 199 MKLISPSSCNNSNITRFAILKQRQSHANQAAAYSASDGKTTAVSANSEKVAP-----EVKRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLLTDGLVPPKHAKRADNYLIYALIAGKKALADAGITEQVSGALNKIDVG 669 M+ + SS S + RQSH A + + +SA++ V+ + K+RVV+TG+G V+ G+D +Y KLL G SGIS I+ FD S+ PTR G+I+ ++G + K+ +R D+ L Y ++AGKKAL A + ++K G Sbjct: 1 MQALQSSSLRASPPNPLRLPSNRQSHQLITNARPLRRQQRSFISASASTVSAPKRETDPKKRVVITGMGLVSVFGNDVDAYYEKLLSGESGISLIDRFDASKFPTRFGGQIRGFSSEGYIDGKNERRLDDCLKYCIVAGKKALESANLGGDKLNTIDKRKAG 162 HSP 2 Score: 21.1718 bits (43), Expect = 9.460e-19 Identity = 7/13 (53.85%), Postives = 10/13 (76.92%), Query Frame = 3 Query: 660 RCGVLIGTAMGSM 698 + GVL+GT MG + Sbjct: 160 KAGVLVGTGMGGL 172
BLAST of FC932188 vs. ExPASy Swiss-Prot
Match: KASC1_HORVU (3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Hordeum vulgare GN=KAS12 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 6.310e-17 Identity = 43/103 (41.75%), Postives = 65/103 (63.11%), Query Frame = 1 Query: 361 KRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLLTDGLVPPKHAKRADNYLIYALIAGKKALADAGITEQVSGALNKIDVG 669 ++RVV+TG+G + G D FY +LL G SG+ I+ FD S PTR AG+I+ ++G + K+ +R D+ + Y +++GKKAL AG+ S A K+DVG Sbjct: 47 RKRVVITGMGLASVFGSDVDTFYDRLLAGESGVGPIDRFDASSFPTRFAGQIRGFSSEGYIDGKNDRRLDDCIRYCILSGKKALESAGLGAG-SDAHVKLDVG 148 HSP 2 Score: 22.3274 bits (46), Expect = 6.310e-17 Identity = 8/13 (61.54%), Postives = 10/13 (76.92%), Query Frame = 3 Query: 660 RCGVLIGTAMGSM 698 R GVL+GT MG + Sbjct: 149 RAGVLVGTGMGGL 161
BLAST of FC932188 vs. ExPASy Swiss-Prot
Match: FABF_BACSU (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Bacillus subtilis GN=fabF PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.177e-13 Identity = 38/96 (39.58%), Postives = 59/96 (61.46%), Query Frame = 1 Query: 361 KRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLLTDGLVPPKHAKRADNYLIYALIAGKKAL--ADAGITEQVS 642 K+RVVVTGLGA++PLG+D + + GVSGI I D E P ++A E+K + + K A++ D + YA++A K A+ AD IT++++ Sbjct: 3 KKRVVVTGLGALSPLGNDVDTSWNNAINGVSGIGPITRVDAEEYPAKVAAELKDFNVEDYMDKKEARKMDRFTQYAVVAAKMAVEDADLNITDEIA 98
BLAST of FC932188 vs. ExPASy Swiss-Prot
Match: FABF_SYNY3 (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Synechocystis sp. (strain PCC 6803) GN=fabF PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.326e-12 Identity = 40/103 (38.83%), Postives = 60/103 (58.25%), Query Frame = 1 Query: 361 KRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLLTDGLVPPKHAKRADNYLIYALIAGKKALADAGITEQVSGALNKIDVG 669 K+RVVVTGLGA+TP+G+ ++ L+EG +GI I FD S+ R GE+K + K AKR D + +A+ A ++A+ DA + V LN ++G Sbjct: 6 KKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQFLDRKEAKRMDRFCHFAVCASQQAINDAKL---VINELNADEIG 105 HSP 2 Score: 21.1718 bits (43), Expect = 1.326e-12 Identity = 8/14 (57.14%), Postives = 11/14 (78.57%), Query Frame = 3 Query: 666 GVLIGTAMGSMRFL 707 GVLIGT +G ++ L Sbjct: 105 GVLIGTGIGGLKVL 118
BLAST of FC932188 vs. ExPASy Swiss-Prot
Match: FABF_SHIFL (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Shigella flexneri GN=fabF PE=3 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.219e-12 Identity = 38/94 (40.43%), Postives = 59/94 (62.77%), Query Frame = 1 Query: 361 KRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLLTDGLVPPKHAKRADNYLIYALIAGKKALADAG--ITEQ 636 KRRVVVTGLG ++P+G+ + LL G SGIS I+ FD S T+ AG +K + ++ K ++ D ++ Y ++AG +A+ D+G ITE+ Sbjct: 3 KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDIISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEE 96
BLAST of FC932188 vs. ExPASy Swiss-Prot
Match: FABF_ECOLI (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli (strain K12) GN=fabF PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.219e-12 Identity = 38/94 (40.43%), Postives = 59/94 (62.77%), Query Frame = 1 Query: 361 KRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLLTDGLVPPKHAKRADNYLIYALIAGKKALADAG--ITEQ 636 KRRVVVTGLG ++P+G+ + LL G SGIS I+ FD S T+ AG +K + ++ K ++ D ++ Y ++AG +A+ D+G ITE+ Sbjct: 3 KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDIISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEE 96
BLAST of FC932188 vs. ExPASy Swiss-Prot
Match: FABF_ECOL6 (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli O6 GN=fabF PE=3 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.219e-12 Identity = 38/94 (40.43%), Postives = 59/94 (62.77%), Query Frame = 1 Query: 361 KRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLLTDGLVPPKHAKRADNYLIYALIAGKKALADAG--ITEQ 636 KRRVVVTGLG ++P+G+ + LL G SGIS I+ FD S T+ AG +K + ++ K ++ D ++ Y ++AG +A+ D+G ITE+ Sbjct: 3 KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDIISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEE 96
BLAST of FC932188 vs. ExPASy Swiss-Prot
Match: FABF_ECO57 (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli O157:H7 GN=fabF PE=3 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.219e-12 Identity = 38/94 (40.43%), Postives = 59/94 (62.77%), Query Frame = 1 Query: 361 KRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLLTDGLVPPKHAKRADNYLIYALIAGKKALADAG--ITEQ 636 KRRVVVTGLG ++P+G+ + LL G SGIS I+ FD S T+ AG +K + ++ K ++ D ++ Y ++AG +A+ D+G ITE+ Sbjct: 3 KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDIISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEE 96
BLAST of FC932188 vs. ExPASy Swiss-Prot
Match: FABF_VIBHA (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio harveyi GN=fabF PE=3 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 6.456e-12 Identity = 40/94 (42.55%), Postives = 57/94 (60.64%), Query Frame = 1 Query: 361 KRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLLTDGLVPPKHAKRADNYLIYALIAGKKALADAG--ITEQ 636 KRRVVVTG+G ++P+G+ + LLEG SGI IE FD + TR AG +K + K A++ D ++ Y + AG +AL D+G ITE+ Sbjct: 3 KRRVVVTGMGMLSPVGNTVESSWKALLEGQSGIVNIEHFDATNFSTRFAGLVKDFDCTEYMSKKDARKMDLFIQYGIAAGIQALDDSGLEITEE 96
BLAST of FC932188 vs. ExPASy Swiss-Prot
Match: FABF_VIBCH (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio cholerae GN=fabF PE=3 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 2.453e-11 Identity = 36/89 (40.45%), Postives = 54/89 (60.67%), Query Frame = 1 Query: 361 KRRVVVTGLGAVTPLGDDAHLFYTKLLEGVSGISQIEGFDCSELPTRIAGEIKTLLTDGLVPPKHAKRADNYLIYALIAGKKALADAGI 627 KRRVVVTG+G ++P+G+ + LL G SGI IE FD + TR AG +K + + K A++ D ++ Y + AG +AL D+G+ Sbjct: 3 KRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKGFDCEQYMSKKDARKMDLFIQYGIAAGIQALEDSGL 91 The following BLAST results are available for this feature:
BLAST of FC932188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932188 ID=FC932188; Name=FC932188; organism=Citrus clementina; type=EST; length=743bpback to top |