FC932198
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932198 vs. ExPASy Swiss-Prot
Match: TC753_ARATH (Protein TOC75-3, chloroplastic OS=Arabidopsis thaliana GN=TOC75-3 PE=1 SV=1) HSP 1 Score: 437.958 bits (1125), Expect = 2.527e-122 Identity = 209/234 (89.32%), Postives = 221/234 (94.44%), Query Frame = 2 Query: 2 TENFTRQSKFTYGLVMEEITTRDESSHISPHGQRVLPSGGISADGPPTTLSGTGIDRMAFLQGNITRDNTKFVNGAIVGERNVFQVDQGLGIGSKFPFFNRHQLTLTRFFQLKQVEEGANKPPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMGELGAARNILELGAEIRIPVKNTHVYAFVEHGNDLGSSKDVKGNPTEVYRRMGHGSSYGVGAKLGLVRAEYAVDH 703 TENFTRQSKFTYGLVMEEITTRDESSHI+ +GQR+LPSGGISADGPPTTLSGTG+DRMAFLQ NITRDNTKFVNGA+VG+R VFQVDQGLGIGSKFPFFNRHQLT+T+F QL++VE+GA K PPPVLVLHGHYGGCVGDLPSYDAF LGGPYSVRGYNMGELGAARNI E+GAEIRIPVKNTHVYAFVEHGNDLGSSKDVKGNPT VYRR G GSSYG G KLGLVRAEYAVDH Sbjct: 570 TENFTRQSKFTYGLVMEEITTRDESSHIAANGQRLLPSGGISADGPPTTLSGTGVDRMAFLQANITRDNTKFVNGAVVGQRTVFQVDQGLGIGSKFPFFNRHQLTMTKFIQLREVEQGAGKSPPPVLVLHGHYGGCVGDLPSYDAFVLGGPYSVRGYNMGELGAARNIAEVGAEIRIPVKNTHVYAFVEHGNDLGSSKDVKGNPTAVYRRTGQGSSYGAGVKLGLVRAEYAVDH 803
BLAST of FC932198 vs. ExPASy Swiss-Prot
Match: TOC75_PEA (Protein TOC75, chloroplastic OS=Pisum sativum GN=TOC75 PE=1 SV=1) HSP 1 Score: 421.779 bits (1083), Expect = 1.874e-117 Identity = 202/234 (86.32%), Postives = 213/234 (91.03%), Query Frame = 2 Query: 2 TENFTRQSKFTYGLVMEEITTRDESSHISPHGQRVLPSGGISADGPPTTLSGTGIDRMAFLQGNITRDNTKFVNGAIVGERNVFQVDQGLGIGSKFPFFNRHQLTLTRFFQLKQVEEGANKPPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMGELGAARNILELGAEIRIPVKNTHVYAFVEHGNDLGSSKDVKGNPTEVYRRMGHGSSYGVGAKLGLVRAEYAVDH 703 TENF+RQSKFTYGLVMEEI TRDES+HI +GQRVLP+G ISADGPPTTLSGTGIDRMAFLQ NITRDNT+FVNG IVG RN+FQVDQGLG+GS FPFFNRHQLT+T+F QL VEEGA K PPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMGE+GAARNILEL AEIRIP+K THVYAF EHG DLGSSKDVKGNPT VYRRMG GSSYG G KLGLVRAEYAVDH Sbjct: 561 TENFSRQSKFTYGLVMEEIITRDESNHICSNGQRVLPNGAISADGPPTTLSGTGIDRMAFLQANITRDNTRFVNGTIVGSRNMFQVDQGLGVGSNFPFFNRHQLTVTKFLQLMSVEEGAGKSPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMGEIGAARNILELAAEIRIPIKGTHVYAFAEHGTDLGSSKDVKGNPTVVYRRMGQGSSYGAGMKLGLVRAEYAVDH 794
BLAST of FC932198 vs. ExPASy Swiss-Prot
Match: TOC75_ORYSJ (Protein TOC75, chloroplastic OS=Oryza sativa subsp. japonica GN=TOC75 PE=2 SV=2) HSP 1 Score: 393.66 bits (1010), Expect = 5.465e-109 Identity = 184/234 (78.63%), Postives = 209/234 (89.32%), Query Frame = 2 Query: 2 TENFTRQSKFTYGLVMEEITTRDESSHISPHGQRVLPSGGISADGPPTTLSGTGIDRMAFLQGNITRDNTKFVNGAIVGERNVFQVDQGLGIGSKFPFFNRHQLTLTRFFQLKQVEEGANKPPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMGELGAARNILELGAEIRIPVKNTHVYAFVEHGNDLGSSKDVKGNPTEVYRRMGHGSSYGVGAKLGLVRAEYAVDH 703 TE+FTRQSKFTYGLV+EEITTRDE++ I HG R +PSGG+S DGPPTTLSGTGIDRMAFLQ NITRDNT+FVNGA++G+R +FQ+DQGLGIGSK PFFNRHQLTLT+F L + E+GA KP P VLVLHGHY GCVGDLPSYDAFTLGGPYSVRGY MGELGA+RN+LE+ +E+RIPV+NT+VY FVEHG DLGSSKDVKGNPTE +RR+GHGSSYG+G KLGLVR EY VDH Sbjct: 569 TESFTRQSKFTYGLVVEEITTRDETNSICTHGSRAMPSGGLSMDGPPTTLSGTGIDRMAFLQANITRDNTEFVNGAVIGDRCIFQLDQGLGIGSKNPFFNRHQLTLTKFVNLNKQEKGAGKPLPAVLVLHGHYAGCVGDLPSYDAFTLGGPYSVRGYGMGELGASRNVLEVASELRIPVRNTYVYGFVEHGTDLGSSKDVKGNPTEFFRRVGHGSSYGLGVKLGLVRGEYIVDH 802
BLAST of FC932198 vs. ExPASy Swiss-Prot
Match: TC754_ARATH (Protein TOC75-4, chloroplastic OS=Arabidopsis thaliana GN=TOC75-4 PE=2 SV=1) HSP 1 Score: 381.719 bits (979), Expect = 2.149e-105 Identity = 181/234 (77.35%), Postives = 203/234 (86.75%), Query Frame = 2 Query: 2 TENFTRQSKFTYGLVMEEITTRDESSHISPHGQRVLPSGGISADGPPTTLSGTGIDRMAFLQGNITRDNTKFVNGAIVGERNVFQVDQGLGIGSKFPFFNRHQLTLTRFFQLKQVEEGANKPPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMGELGAARNILELGAEIRIPVKNTHVYAFVEHGNDLGSSKDVKGNPTEVYRRMGHGSSYGVGAKLGLVRAEYAVDH 703 TEN TRQ + TYG++ EEI TRDE+ IS +G + P GGIS +GPPTTLSGTGID +A LQ NITRDNTK VNGA+VGE+N+FQVDQGLGIG+ FP FNRHQL+LT F QLKQVEEG++KP PPVLVLHG YGGC+GDLPSYD F LGGP SVRGY+MGELGAA+NILELGAEIRIPVKNTHVYAF EHGNDLGSSKDVKGNPT +YR+MGHGSSYG+G KLG+VRAEY V H Sbjct: 148 TENLTRQRELTYGVMFEEIITRDENRRISENGLLLSPDGGISINGPPTTLSGTGIDHIATLQANITRDNTKLVNGAVVGEKNIFQVDQGLGIGNNFPLFNRHQLSLTSFIQLKQVEEGSDKPQPPVLVLHGRYGGCIGDLPSYDVFALGGPNSVRGYSMGELGAAKNILELGAEIRIPVKNTHVYAFAEHGNDLGSSKDVKGNPTGLYRKMGHGSSYGLGVKLGMVRAEYTVRH 381
BLAST of FC932198 vs. ExPASy Swiss-Prot
Match: OEP80_ARATH (Outer envelope protein of 80 kDa OS=Arabidopsis thaliana GN=OEP80 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.869e-11 Identity = 49/154 (31.82%), Postives = 74/154 (48.05%), Query Frame = 2 Query: 251 FQVDQGLGIGSKFPFFNRHQLTLTRFFQLKQVEEGANKPPPPVLV-LHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMGELGAARNILELGAEIRIPVKN-THVYAFVEHGNDLGSSKDVKGNPTEVYRRMGHGSSYGVGAK----LGLVRAEYA 694 F ++QGL + ++ FNR + +G + P L L G G VG ++AF +GG SVRGY G +G+ R+ + E+ PV+ F ++G D+GS V G+P + G G YG+G + LG +R EYA Sbjct: 573 FNMEQGLPVLPEWLCFNR---------VTGRARKGIHIGPARFLFSLSG--GHVVGKFSPHEAFVIGGTNSVRGYEEGAVGSGRSYVVGSGELSFPVRGPVEGVIFTDYGTDMGSGSTVPGDPAGARLKPGSGYGYGLGVRVDSPLGPLRLEYA 715
BLAST of FC932198 vs. ExPASy Swiss-Prot
Match: OEP80_ORYSJ (Outer envelope protein of 80 kDa OS=Oryza sativa subsp. japonica GN=OEP80 PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 8.972e-11 Identity = 49/157 (31.21%), Postives = 76/157 (48.41%), Query Frame = 2 Query: 248 VFQVDQGLGIGSKFPFFNRHQLTLTRFFQLKQVEEGANKPPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMGELGAARNIL----ELGAEIRIPVKNTHVYAFVEHGNDLGSSKDVKGNPTEVYRRMGHGSSYGVGAK----LGLVRAEYA 694 VF ++QGL I ++ FNR L + +++ P L+L G G+ ++AF +GG SVRGY G +G+ R+ E+ + P++ F ++G+DL S V G+P + G G YGVG + LG +R EYA Sbjct: 505 VFNIEQGLPILPEWLSFNRVTARLRQGYEIG----------PARLLLSASGGHVEGNFSPHEAFAIGGTNSVRGYEEGAVGSGRSYAVGSGEVSCRMFGPLEGV---VFGDYGSDLSSGPKVPGDPAGARGKPGSGYGYGVGVRVDSPLGPLRLEYA 648 The following BLAST results are available for this feature:
BLAST of FC932198 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932198 ID=FC932198; Name=FC932198; organism=Citrus clementina; type=EST; length=727bpback to top |