FC932221

Overview
NameFC932221
Unique NameFC932221
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3280 contig Ccv1_Contig3280:358..1059. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932221 vs. ExPASy Swiss-Prot
Match: DNAJ_NITEC (Chaperone protein dnaJ OS=Nitrosomonas eutropha (strain C91) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.977e-12
Identity = 46/113 (40.71%), Postives = 60/113 (53.10%), Query Frame = 2
Query:  266 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRREELLDYFRRFQSASQKNGRHGFFGSGYARSEADC-DDPFGESG 601
            D+Y  LG+ R  + D S LK+ YRK AM  HPD+N G+ KA E FK+++ AYEVL DS KR AYD             +F  A    G  G    G++ + +D   D FG  G
Sbjct:    5 DYYEVLGVGR--DADESELKKVYRKLAMKYHPDRNAGDAKAEERFKEIKEAYEVLSDSNKRAAYD-------------QFGHAGLNGGVGGAGAQGFSDAFSDIFSDLFGMRG 102          
BLAST of FC932221 vs. ExPASy Swiss-Prot
Match: DNAJ_EHRRW (Chaperone protein dnaJ OS=Ehrlichia ruminantium (strain Welgevonden) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.702e-11
Identity = 48/113 (42.48%), Postives = 63/113 (55.75%), Query Frame = 2
Query:  263 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRREELLDYFRRFQSA-SQKNGRHGF-FGSGYARSEADC-DDPFG 592
            +D+Y  LGLS+  N     +K+ YRK A+  HPDKN G++ A E FK+L  AY+VL D  KR AYD            R   SA S  +GR GF F SG++   +D  +D FG
Sbjct:    4 SDYYDLLGLSK--NATPEEIKKAYRKMALKYHPDKNPGDKAAEEKFKELSEAYDVLIDKDKRAAYD------------RYGHSAFSDGSGRGGFDFNSGFSTDFSDIFNDLFG 102          
BLAST of FC932221 vs. ExPASy Swiss-Prot
Match: DNAJ_EHRRG (Chaperone protein dnaJ OS=Ehrlichia ruminantium (strain Gardel) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.702e-11
Identity = 48/113 (42.48%), Postives = 63/113 (55.75%), Query Frame = 2
Query:  263 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRREELLDYFRRFQSA-SQKNGRHGF-FGSGYARSEADC-DDPFG 592
            +D+Y  LGLS+  N     +K+ YRK A+  HPDKN G++ A E FK+L  AY+VL D  KR AYD            R   SA S  +GR GF F SG++   +D  +D FG
Sbjct:    4 SDYYDLLGLSK--NATPEEIKKAYRKMALKYHPDKNPGDKAAEEKFKELSEAYDVLIDKDKRAAYD------------RYGHSAFSDGSGRGGFDFNSGFSTDFSDIFNDLFG 102          
BLAST of FC932221 vs. ExPASy Swiss-Prot
Match: DNAJ_EHRCR (Chaperone protein dnaJ OS=Ehrlichia chaffeensis (strain Arkansas) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.702e-11
Identity = 44/112 (39.29%), Postives = 63/112 (56.25%), Query Frame = 2
Query:  263 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRREELLDYFRRFQSASQKNGRHGF-FGSGYARSEADC-DDPFG 592
            +D+Y  LG+S+    +   +K+ YRK A+  HPDKN GN++A E FK+L  AY+VL D  KR AYD            +   +A   +GR GF F SG++   +D  +D FG
Sbjct:    4 SDYYDLLGVSKSATPEE--IKKAYRKMALKYHPDKNPGNKEAEEKFKELSEAYDVLIDQDKRAAYD------------KYGHNAFDSSGRGGFDFNSGFSGDFSDIFNDLFG 101          
BLAST of FC932221 vs. ExPASy Swiss-Prot
Match: DNAJ_XANP2 (Chaperone protein dnaJ OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.223e-11
Identity = 48/112 (42.86%), Postives = 60/112 (53.57%), Query Frame = 2
Query:  266 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRREELLDYFRRFQSASQKNGRHG--FFGSGYARSEADC-DDPFG 592
            D+Y  LG  R    D ++LK  YRK AM  HPD++ GN +A   FK++  AYEVL D  KR AYD             RF  A+ +NG  G   FG+ +A S AD  DD FG
Sbjct:    5 DYYETLGCDR--GADDTVLKASYRKLAMKWHPDRSQGNGEAEVMFKEVNEAYEVLKDPQKRAAYD-------------RFGHAAFENGGGGGPGFGNDFASSFADIFDDLFG 101          
BLAST of FC932221 vs. ExPASy Swiss-Prot
Match: DNAJ_VIBPA (Chaperone protein dnaJ OS=Vibrio parahaemolyticus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.791e-11
Identity = 41/110 (37.27%), Postives = 60/110 (54.55%), Query Frame = 2
Query:  266 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRREELLDYFRRFQSASQKNGRHGFFGSGYARSEADCDDPFGE 595
            D Y  LG+SR  +     +K+ Y++ AM  HPD+N G+E A + FK+++ AYEVL DS K+ AYD             ++  A+ + G  G FG G+    AD  D FG+
Sbjct:    5 DFYEVLGVSR--DASERDIKKAYKRLAMKFHPDRNQGDESAADKFKEVKEAYEVLTDSQKKAAYD-------------QYGHAAFEQGGGG-FGGGFGGGGADFGDIFGD 98          
BLAST of FC932221 vs. ExPASy Swiss-Prot
Match: DNAJ_VIBHA (Chaperone protein dnaJ OS=Vibrio harveyi GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.791e-11
Identity = 38/110 (34.55%), Postives = 59/110 (53.64%), Query Frame = 2
Query:  266 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRREELLDYFRRFQSASQKNGRHGFFGSGYARSEADCDDPFGE 595
            D Y  LG+SR  +     +K+ Y++ AM  HPD+N G+E A + FK+++ +YE+L D  K+ AYD             ++  A+ + G  GF G G+    AD  D FG+
Sbjct:    5 DFYEVLGVSR--DASERDIKKAYKRLAMKYHPDRNQGDESAADKFKEVKESYEILTDPQKKAAYD-------------QYGHAAFEQGGGGFGGGGFGGGGADFGDIFGD 99          
BLAST of FC932221 vs. ExPASy Swiss-Prot
Match: DNAJ_PECCP (Chaperone protein dnaJ OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.952e-11
Identity = 38/110 (34.55%), Postives = 61/110 (55.45%), Query Frame = 2
Query:  266 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRREELLDYFRRFQSASQKNGRHGFFGSGYARSEADCDDPFGE 595
            D+Y +LG+++  + D   +K+ Y++ AM  HPD+N G+ +A   FK+++ AYE+L DS KR AYD             ++  A+ + G  G  G G+    AD  D FG+
Sbjct:    5 DYYESLGVAK--SADEREIKKAYKRLAMKYHPDRNPGDSEAEAKFKEIKEAYEILIDSQKRAAYD-------------QYGHAAFEQGGMGGSGGGFGGGGADFGDIFGD 99          
BLAST of FC932221 vs. ExPASy Swiss-Prot
Match: DNAJ_NITEU (Chaperone protein dnaJ OS=Nitrosomonas europaea GN=dnaJ PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 4.952e-11
Identity = 43/114 (37.72%), Postives = 59/114 (51.75%), Query Frame = 2
Query:  263 TDHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRREELLDYFRRFQSASQKNGRHGFFGSGYARSEADC-DDPFGESG 601
            +D+Y  LG+ R  + D + LK+ YRK AM  HPD+N G+ KA E FK ++ AYE+L D  KR AYD             +F  A    G  G    G++ + +D   D FG  G
Sbjct:    4 SDYYEVLGVGR--DADENELKKAYRKLAMKYHPDRNAGDTKAEERFKNIKEAYEILSDPNKRAAYD-------------QFGHAGLNGGMGGAGAQGFSDAFSDIFSDLFGMRG 102          
BLAST of FC932221 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOD6 (Chaperone protein dnaJ OS=Clostridium difficile (strain 630) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.952e-11
Identity = 41/110 (37.27%), Postives = 58/110 (52.73%), Query Frame = 2
Query:  266 DHYSALGLSRFENVDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEVLFDSFKRKAYDDELRREELLDYFRRFQSASQKNGRHGFFGSGYARSEADCDDPFGE 595
            D+Y  LG+S+    +   +K+ YRK AM  HPD+N G+++A E FK++  AYEVL D  KRK Y D+   + L              G+ GF G G+   E    D FG+
Sbjct:    6 DYYEVLGISK--GAEAQEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEINEAYEVLSDDTKRKTY-DQFGHDGL-------NGQGGFGGQGGFGGQGFGGFEDMFGDIFGD 105          
The following BLAST results are available for this feature:
BLAST of FC932221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
DNAJ_NITEC9.977e-1240.71Chaperone protein dnaJ OS=Nitrosomonas eutropha (s... [more]
DNAJ_EHRRW1.702e-1142.48Chaperone protein dnaJ OS=Ehrlichia ruminantium (s... [more]
DNAJ_EHRRG1.702e-1142.48Chaperone protein dnaJ OS=Ehrlichia ruminantium (s... [more]
DNAJ_EHRCR1.702e-1139.29Chaperone protein dnaJ OS=Ehrlichia chaffeensis (s... [more]
DNAJ_XANP22.223e-1142.86Chaperone protein dnaJ OS=Xanthobacter autotrophic... [more]
DNAJ_VIBPA3.791e-1137.27Chaperone protein dnaJ OS=Vibrio parahaemolyticus ... [more]
DNAJ_VIBHA3.791e-1134.55Chaperone protein dnaJ OS=Vibrio harveyi GN=dnaJ P... [more]
DNAJ_PECCP4.952e-1134.55Chaperone protein dnaJ OS=Pectobacterium carotovor... [more]
DNAJ_NITEU4.952e-1137.72Chaperone protein dnaJ OS=Nitrosomonas europaea GN... [more]
DNAJ_CLOD64.952e-1137.27Chaperone protein dnaJ OS=Clostridium difficile (s... [more]

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Properties
Property NameValue
Genbank descriptionC34205H09EF PostHarveN Citrus clementina cDNA clone C34205H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932221 ID=FC932221; Name=FC932221; organism=Citrus clementina; type=EST; length=701bp
ACTGAATTTATCTTTTGTCTCAAGTGATGCTCTCATATTCTTCTTAAAGA
GTAAAGTAAATCAGCACAAAACTGATAGTTCCCCTGAGCAAACCTCTGGA
ATGCAAGCTGGACCAAGCTTTTCCAATGGTGAGCCTGTGCATCCTGCATT
CTCTGATAATGTTCCTGGGTTATCAGCAGATCGTAGTCCTGGAGTGCCTT
CAACCAGTGGGGATGACTCTGAGATGACATCTGAAGATGAAGTTGTTCGG
TTACTGAATTGTACTGATCACTATTCTGCTTTGGGCTTGTCGCGGTTTGA
GAACGTTGATGTGTCTATACTCAAGAGGGAATATAGAAAAAAGGCTATGC
TGGTCCATCCTGATAAGAATATGGGTAATGAAAAGGCTGTTGAAGCTTTT
AAAAAACTTCAGAATGCGTATGAGGTTCTTTTTGATTCCTTTAAGCGAAA
AGCATACGACGATGAGTTGAGGAGAGAAGAGCTGCTAGACTATTTCCGTA
GATTCCAAAGTGCTTCTCAGAAGAATGGTAGGCATGGTTTCTTTGGCTCG
GGATATGCACGGTCAGAGGCTGATTGCGACGATCCTTTTGGAGAATCAGG
CGAATTGCCTGNCAAAAGTGCAATAACTTTCATGTCTGGATAGAGACCAA
GAAATCAAGGCCAGTGTAAGATGGTGCCAGGAAATGCATGATTATCATCA
G
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