FC932228
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932228 vs. ExPASy Swiss-Prot
Match: Y1736_ARATH (REF/SRPP-like protein At1g67360 OS=Arabidopsis thaliana GN=At1g67360 PE=2 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.888e-55 Identity = 111/199 (55.78%), Postives = 136/199 (68.34%), Query Frame = 1 Query: 106 METERKKQE---LRHLGFMRIAAIKALVCVSSLYDYAKRNSGPLRSPVGTVESAVTAVVGPVYQKFKGVPXXXXXXXXXXXXXASRKFDEHAPPLAKRVASQVHSLIETASQKAQKLVIEAQTGGPRAAVHYAAAESKHLLLTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYTVFGYLPLVPL 693 METE+K + L+HL F+RIA I L VS+LY+YAK+NSGPL+S V VE AVT VV PVYQKFK VP S KFDEHAPP+AK+V +Q H LI A++KAQ V EA+TGGP+AA +YAA E K ++TNSVK W KLN Y H M D A+P AA +S +YN LV +MT GY++ GYLPLVP+ Sbjct: 1 METEKKNSKEVALKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVTPVYQKFKDVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKEARTGGPKAAFNYAATEYKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHFSSRYNDLVTDMTNMGYSLVGYLPLVPV 199
BLAST of FC932228 vs. ExPASy Swiss-Prot
Match: SRP_VITRI (Stress-related protein OS=Vitis riparia GN=SRP PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.780e-29 Identity = 76/205 (37.07%), Postives = 107/205 (52.20%), Query Frame = 1 Query: 121 KKQELRHLGFMRIAAIKALVCVSSLYDYAKRNSGPLRSPVGTVESAVTAVVGPVYQKFKGVPXXXXXXXXXXXXXASRKFDEHAPPLAKRVASQVHSLIETASQKAQKLVIEAQTGGPRAAVH------YAAAESKHLLLTN---------SVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYTVFGYLPLVP 690 +++ L++L F+++AAI +VC SSLY+YAK NSGPL+ V TVE V V+GPVY+KF VP + + + H P L KR + Q ++ + A + A + E Q G Y+ E L + +V AW LN LF +A + VPTAA WS+KYN V ++GYTV YLPL+P Sbjct: 16 EEKRLKYLDFVQVAAIYVIVCFSSLYEYAKENSGPLKPGVQTVEGTVKTVIGPVYEKFYDVPFELLMFVDRKVEASIYELERHVPSLVKRASCQAITVAQKAPELALAVASEVQRPGVVDTAKNITKNVYSKCEPTAKELCSKYEPVAEQYAVSAWRSLNRLPLFPQVAQVVVPTAAYWSEKYNQSVSYTAERGYTVALYLPLIP 220
BLAST of FC932228 vs. ExPASy Swiss-Prot
Match: Y3550_ARATH (REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana GN=At3g05500 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.666e-27 Identity = 78/210 (37.14%), Postives = 110/210 (52.38%), Query Frame = 1 Query: 112 TERKKQELRHLGFMRIAAIKALVCVSSLYDYAKRNSGPLRSPVGTVESAVTAVVGPVYQKFKGVPXXXXXXXXXXXXXASRKFDEHAPPLAKRVASQVHSLIETASQKAQKLVIEAQTGG-----------------PRAAVHYAAAESKHLLLTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYTVFGYLPLVP 690 T+ +K+ L++L F++ AA++AL+ + +Y AK SGPL+ V +VE AV VVGPVY+K+ VP + + D PP+ K+V++Q S + A A+ L E + G P A YA E K +V AW KLN LF +A +AVPTAA S+KYN VV+ +KGY V Y+PLVP Sbjct: 15 TKEEKERLKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESVEGAVKTVVGPVYEKYHDVPVEVLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAPIVARALASEVRRAGVVETASGMAKSVYSKYEPAAKELYANYEPK--AEQCAVSAWKKLNQLPLFPRLAQVAVPTAAFCSEKYNDTVVKAAEKGYRVTSYMPLVP 222
BLAST of FC932228 vs. ExPASy Swiss-Prot
Match: Y5513_ORYSJ (REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 OS=Oryza sativa subsp. japonica GN=Os05g0151300 PE=2 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 4.246e-23 Identity = 71/208 (34.13%), Postives = 106/208 (50.96%), Query Frame = 1 Query: 94 RSEDMETERKKQELRHLGFMRIAAIKALVCVSSLYDYAKRNSGPLRSPVGTVESAVTAVVGPVYQKFKGVPXXXXXXXXXXXXXASRKFDEHAPP-------LAKRVASQVH--SLIETASQKAQKLVIEAQTGGPRAAVHYAAAESKHLLLTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYTVFGYLPLVP 690 ++ +ME +++ LR+L F++ AA + LV ++ Y YAK+ +GPLR V VE V AVVGPVY +F GVP + ++ D PP LA+ A++V L+ TA+ A+ + A+ PRA Y E + + +AW LN L ++ +P AA S +YN V + K+G V YLPLVP Sbjct: 22 KTPEMEAAAEEERLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPVYDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVKEAPGLARSAAAEVRQAGLVGTATGLAKSAIARAE---PRARDLYTRYEP--VAERKAAEAWAALNRLPLVPSVTRAVLPAAASLSARYNTAVADGAKRGSAVATYLPLVP 224
BLAST of FC932228 vs. ExPASy Swiss-Prot
Match: Y5513_ORYSI (REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica GN=OsI_017815 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.246e-23 Identity = 71/208 (34.13%), Postives = 106/208 (50.96%), Query Frame = 1 Query: 94 RSEDMETERKKQELRHLGFMRIAAIKALVCVSSLYDYAKRNSGPLRSPVGTVESAVTAVVGPVYQKFKGVPXXXXXXXXXXXXXASRKFDEHAPP-------LAKRVASQVH--SLIETASQKAQKLVIEAQTGGPRAAVHYAAAESKHLLLTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYTVFGYLPLVP 690 ++ +ME +++ LR+L F++ AA + LV ++ Y YAK+ +GPLR V VE V AVVGPVY +F GVP + ++ D PP LA+ A++V L+ TA+ A+ + A+ PRA Y E + + +AW LN L ++ +P AA S +YN V + K+G V YLPLVP Sbjct: 22 KTPEMEAAAEEERLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPVYDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVKEAPGLARSAAAEVRQAGLVGTATGLAKSAIARAE---PRARDLYTRYEP--VAERKAAEAWAALNRLPLVPSVTRAVLPAAASLSARYNTAVADGAKRGSAVATYLPLVP 224
BLAST of FC932228 vs. ExPASy Swiss-Prot
Match: SRPP_HEVBR (Small rubber particle protein OS=Hevea brasiliensis GN=SRPP PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.278e-19 Identity = 62/195 (31.79%), Postives = 97/195 (49.74%), Query Frame = 1 Query: 106 METERKKQELRHLGFMRIAAIKALVCVSSLYDYAKRNSGPLRSPVGTVESAVTAVVGPVYQKFKGVPXXXXXXXXXXXXXASRKFDEHAPPLAKRVASQVHSLIETASQKAQKLVIEAQTGGPRAAVHYAAAESKHLLLTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYTVFGYLPLVP 690 M E +++ L++L F+R A + A+ S+LY YAK SGPL+ V T+E+ V VV PVY +P + D PP+ K+V++Q +S+ + A + + G + A + +V W LN L +A++ VPTA +S+KYN +V T++GY V YLPL+P Sbjct: 1 MAEEVEEERLKYLDFVRAAGVYAVDSFSTLYLYAKDISGPLKPGVDTIENVVKTVVTPVYY----IPLEAVKFVDKTVDVSVTSLDGVVPPVIKQVSAQTYSVAQDAPRIVLDVASSVFNTGVQEGAKALYANLEPKAEQYAVITWRALNKLPLVPQVANVVVPTAVYFSEKYNDVVRGTTEQGYRVSSYLPLLP 191
BLAST of FC932228 vs. ExPASy Swiss-Prot
Match: SRP_PHAVU (Stress-related protein OS=Phaseolus vulgaris GN=SRP PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.858e-19 Identity = 61/169 (36.09%), Postives = 81/169 (47.93%), Query Frame = 1 Query: 193 LYDYAKRNSGPLRSPVGTVESAVTAVVGPVYQKFKGVPXXXXXXXXXXXXXASRK---FDEHAPPLAKRVASQVHSLIETASQKAQKLVIEAQTGGPRAAVHYAAAESKHLLLTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYTVFGYLPLVP 690 LY YAK +GPL+ V TVE AV VV PVY +F VP A RK D H P K+V+SQ S++ E + G ++ + +V AW KLN LF +A+ +P AA ++KYN ++V +KGY V YLPLVP Sbjct: 6 LYSYAKERAGPLKPGVNTVEDAVKTVVAPVYDRFHLVPVELLKY-------ADRKVGELDRHVPSNVKKVSSQARSVVS-----------EVRRDGVSTFAKTVYSKYEPTAEQCAVSAWRKLNQLPLFPQVANAVLPKAAYCTEKYNEVIVSSAEKGYRVSAYLPLVP 156
BLAST of FC932228 vs. ExPASy Swiss-Prot
Match: Y2778_ARATH (REF/SRPP-like protein At2g47780 OS=Arabidopsis thaliana GN=At2g47780 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.082e-18 Identity = 59/198 (29.80%), Postives = 94/198 (47.47%), Query Frame = 1 Query: 124 KQELRHLGFMRIAAIKALVCVSSLYDYAKRNSGPLRSPVGTVESAVTAVVGPVYQKFKGVPXXXXXXXXXXXXXASRKFDEHAPPLAKRVASQVHSLIETASQKAQKLVIEAQTGGPR--------AAVHYAAAESKHLLLTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYTVFGYLPLVPL 693 + +L+HL F+++AA+ C S+LY+ AK N+GPL+ V +E V V+ P+Y+KF VP + + P L K+ +SQ + A++ + V++ R AA +YAA W LN LF +A + +PTA WS+KYN V + + Y YLP++P+ Sbjct: 38 EMKLKHLEFIQVAAVYFAACFSTLYELAKDNAGPLKLGVENIEDCVRTVLAPLYEKFHDVPFKLLLFVDRKVDDVFFDVETYVPSLVKQASSQA---LTVATEVQRTGVVDTTKSIARSVRDKYEPAAEYYAAT------------LWRLLNQLPLFPEVAHLVIPTAFYWSEKYNDAVRYVGDRDYFGAEYLPMIPI 220 The following BLAST results are available for this feature:
BLAST of FC932228 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932228 ID=FC932228; Name=FC932228; organism=Citrus clementina; type=EST; length=695bpback to top |