FC932249
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932249 vs. ExPASy Swiss-Prot
Match: CDC5L_ARATH (Cell division cycle 5-like protein OS=Arabidopsis thaliana GN=CDC5 PE=1 SV=2) HSP 1 Score: 229.95 bits (585), Expect = 9.102e-60 Identity = 111/167 (66.47%), Postives = 131/167 (78.44%), Query Frame = 3 Query: 15 NLARMRESQTPLLGGENPELHPSDFSGVTPKKREIQTPNPILTPSATPGGMGSTPRIGMTPSRDGSSFGVTPKGTPIRDELHINEDLDMHDSAKLEQRRQAELRRNLRLGLTSLPQPTNEYQIVVQXXXXXXXXXXXXXXXDMSDRLARERPRKKLGSRHCLGRDQK 515 NLAR+R+SQTPLLGGENPELHPSDF+GVTP+K+EIQTPNP+LTPS TPGG G TPRIG+TPSRDGSSF +TPKGTP RDELHINED+DMH+SAKLE++R+ E RR+LR GLT LPQP NEYQIV Q DMSDR+ARE+ ++ + L + K Sbjct: 371 NLARLRDSQTPLLGGENPELHPSDFTGVTPRKKEIQTPNPMLTPSMTPGGAGLTPRIGLTPSRDGSSFSMTPKGTPFRDELHINEDMDMHESAKLERQRREEARRSLRSGLTGLPQPKNEYQIVAQPPPEESEEPEEKIEEDMSDRIAREKAEEEARQQALLKKRSK 537 HSP 2 Score: 97.8265 bits (242), Expect = 5.398e-20 Identity = 49/61 (80.33%), Postives = 55/61 (90.16%), Query Frame = 2 Query: 464 KAEEEARQQALLRKRSKVLQRELPRPPVASLELIRNSLLRADGDKSSFVPPTSIEQADEII 646 KAEEEARQQALL+KRSKVLQR+LPRPP ASL +IRNSLL ADGDKSS VPPT IE AD+++ Sbjct: 521 KAEEEARQQALLKKRSKVLQRDLPRPPAASLAVIRNSLLSADGDKSSVVPPTPIEVADKMV 581
BLAST of FC932249 vs. ExPASy Swiss-Prot
Match: CDC5L_NEMVE (Cell division cycle 5-related protein OS=Nematostella vectensis GN=cdc5l PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.066e-23 Identity = 57/130 (43.85%), Postives = 83/130 (63.85%), Query Frame = 3 Query: 15 NLARMRESQTPLLGGENPELHPSDFSGVTPKKREIQTPNPIL-TPSATPG-GMGSTPRIGMTPSRDGSSFGVTPKGTPIRDELHINED---LDMHDSAKLEQRRQAELRRNLRLGLTSLPQPTNEYQIVV 389 N+ + TPL GG N +H SDF GVTP+++ IQTPN +L TP TPG G GSTPR GMTP + G TP +RD+L+IN + ++ ++S +++Q+E + L GL SLP P+N+++IV+ Sbjct: 368 NILALSNVDTPLKGGLNTPMHESDFQGVTPRQQAIQTPNMLLSTPYRTPGEGSGSTPRQGMTPR---GAIG-TPSQRSVRDKLNINPEDAVMEEYESECAAKQQQSEAKEQLLAGLASLPAPSNDFEIVL 493 HSP 2 Score: 31.187 bits (69), Expect = 1.066e-23 Identity = 18/59 (30.51%), Postives = 36/59 (61.02%), Query Frame = 2 Query: 479 ARQQAL-LRKRSKVLQRELPRPPVASLELIRNSLLRADGDKSSFVPPTSIEQADEIIER 652 A+Q+ L R+RS+ +QRELPRP + ++R + + P ++++ A+E+I++ Sbjct: 525 AKQEELERRRRSQAVQRELPRPSNVNTSVLRPTNVEP--------PLSALQMAEELIKK 575
BLAST of FC932249 vs. ExPASy Swiss-Prot
Match: CDC5L_HUMAN (Cell division cycle 5-like protein OS=Homo sapiens GN=CDC5L PE=1 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.421e-20 Identity = 60/130 (46.15%), Postives = 79/130 (60.77%), Query Frame = 3 Query: 15 NLARMRESQTPLLGGENPELHPSDFSGVTPKKREIQTPNPIL-TPSATP--GGMGSTPRIGMTPSRDGSSFGVTPKGTPIRDELHINEDLDMHD--SAKLEQRRQAELRRNLRLGLTSLPQPTNEYQIVV 389 NL + TPL GG N LH SDFSGVTP+++ +QTPN +L TP TP G G TPR G TP +S TP TP+RD+L+IN + M D ++ + E R +LRLGL LP P N+++IV+ Sbjct: 368 NLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSNGAEGLTPRSGTTPKPVINS---TPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGLLGLPAPKNDFEIVL 494
BLAST of FC932249 vs. ExPASy Swiss-Prot
Match: CDC5L_BOVIN (Cell division cycle 5-like protein OS=Bos taurus GN=CDC5L PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.421e-20 Identity = 60/130 (46.15%), Postives = 79/130 (60.77%), Query Frame = 3 Query: 15 NLARMRESQTPLLGGENPELHPSDFSGVTPKKREIQTPNPIL-TPSATP--GGMGSTPRIGMTPSRDGSSFGVTPKGTPIRDELHINEDLDMHD--SAKLEQRRQAELRRNLRLGLTSLPQPTNEYQIVV 389 NL + TPL GG N LH SDFSGVTP+++ +QTPN +L TP TP G G TPR G TP +S TP TP+RD+L+IN + M D ++ + E R +LRLGL LP P N+++IV+ Sbjct: 368 NLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSHGSEGLTPRSGTTPKPVINS---TPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGLLGLPAPKNDFEIVL 494
BLAST of FC932249 vs. ExPASy Swiss-Prot
Match: CDC5L_RAT (Cell division cycle 5-related protein OS=Rattus norvegicus GN=Cdc5l PE=1 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 1.855e-20 Identity = 59/130 (45.38%), Postives = 77/130 (59.23%), Query Frame = 3 Query: 15 NLARMRESQTPLLGGENPELHPSDFSGVTPKKREIQTPNPIL-TPSATP--GGMGSTPRIGMTPSRDGSSFGVTPKGTPIRDELHINEDLDMHD--SAKLEQRRQAELRRNLRLGLTSLPQPTNEYQIVV 389 NL + TPL GG N LH SDFSGVTP+++ +QTPN +L TP TP G G TPR G TP TP TP+RD+L+IN + M D ++ + E R +LRLGL LP P N+++IV+ Sbjct: 368 NLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSNGAEGLTPRSGTTPK---PVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGLLGLPAPKNDFEIVL 494
BLAST of FC932249 vs. ExPASy Swiss-Prot
Match: CDC5L_MOUSE (Cell division cycle 5-related protein OS=Mus musculus GN=Cdc5l PE=1 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 1.855e-20 Identity = 59/130 (45.38%), Postives = 77/130 (59.23%), Query Frame = 3 Query: 15 NLARMRESQTPLLGGENPELHPSDFSGVTPKKREIQTPNPIL-TPSATP--GGMGSTPRIGMTPSRDGSSFGVTPKGTPIRDELHINEDLDMHD--SAKLEQRRQAELRRNLRLGLTSLPQPTNEYQIVV 389 NL + TPL GG N LH SDFSGVTP+++ +QTPN +L TP TP G G TPR G TP TP TP+RD+L+IN + M D ++ + E R +LRLGL LP P N+++IV+ Sbjct: 368 NLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSNGAEGLTPRSGTTPK---PVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGLLGLPAPKNDFEIVL 494
BLAST of FC932249 vs. ExPASy Swiss-Prot
Match: CEF1_CRYNE (Pre-mRNA-splicing factor CEF1 OS=Cryptococcus neoformans GN=CEF1 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.054e-15 Identity = 51/128 (39.84%), Postives = 72/128 (56.25%), Query Frame = 3 Query: 15 NLARMRESQTPLLGGENPELH-PS---DFSGVTPKKREIQTPNPILTPSATPGGMGSTPRIGMTPSRDGSSFGVTPKGTPIRDELHINEDLDMHDSAKL-EQRRQAELRRNLRLGLTSLPQPTNEYQI 383 NL M +QTPLLG EN LH PS F G TP+ TPNP+ T + GG+ +T +R G TP TP RD+L+IN+D ++ + ++RR AE RR L+ G +LP+P N +++ Sbjct: 379 NLRNMMAAQTPLLGEENTPLHGPSVGTGFEGATPRHDVAATPNPLATSAR--GGV-------LTSTRTVPGVGTTPLRTPFRDDLNINDDASVYGETPMNDRRRLAESRRALKAGFAALPKPENNFEL 497
BLAST of FC932249 vs. ExPASy Swiss-Prot
Match: CEF1_MAGGR (Pre-mRNA-splicing factor CEF1 OS=Magnaporthe grisea GN=CEF1 PE=3 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 1.941e-13 Identity = 46/129 (35.66%), Postives = 63/129 (48.84%), Query Frame = 3 Query: 15 NLARMRESQTPLLGGENPELHP----SDFSGVTPKKREIQTPNPILTP--------SATPGGMGSTPRIGMTPSRDGSSFGVTPKGTPIRDELHINEDLDMHDSAKLEQRRQAELRRNLRLGLTSLPQP 365 N+ ++E+Q+ LLGGEN LH + F GV P+K+ + TPNP+ TP TPGG G+TPR + G TP TP RD +N D + R+ L GL +LP+P Sbjct: 382 NIRALQETQSSLLGGENTPLHEGVASTGFDGVAPRKQVMSTPNPLATPMRSGANGMGMTPGGPGATPR----------APGQTPLRTP-RDGFSLNSVGD-----------EVASRQQLLKGLAALPKP 488 HSP 2 Score: 31.9574 bits (71), Expect = 1.941e-13 Identity = 13/29 (44.83%), Postives = 22/29 (75.86%), Query Frame = 2 Query: 476 EARQQALLRKRSKVLQRELPRPPVASLEL 562 EA++ R+R++V+QR+LPRP V ++L Sbjct: 526 EAQEALERRRRTQVMQRDLPRPAVVDIDL 554
BLAST of FC932249 vs. ExPASy Swiss-Prot
Match: CEF1_NEUCR (Pre-mRNA-splicing factor cef-1 OS=Neurospora crassa GN=cef-1 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 7.171e-13 Identity = 44/124 (35.48%), Postives = 67/124 (54.03%), Query Frame = 3 Query: 15 NLARMRESQTPLLGGENPELHP----SDFSGVTPKKREIQTPNPILTPSATPG-GMGSTP-RIGMTPSRDGSSFGVTPKGTPIRDELHINEDLDMHDSAKLE-QRRQAELRRNLRLGLTSLPQP 365 N+ + E+Q+ LLGGEN LH + F V P+K+ + TPNP+ TP G G G+TP R+G TP R TP+ T ++ +++ M + + R+ +R L+ GL SLP+P Sbjct: 378 NIRALTETQSSLLGGENTPLHQGVGSTGFESVAPRKQVMSTPNPLATPLRAAGAGPGATPLRVGQTPLR-------TPRDTFALND--AGDEMSMVGGTPRDVKMREMSIRHQLKQGLASLPKP 492 HSP 2 Score: 27.7202 bits (60), Expect = 7.171e-13 Identity = 11/22 (50.00%), Postives = 18/22 (81.82%), Query Frame = 2 Query: 476 EARQQALLRKRSKVLQRELPRP 541 EAR+ ++R++V+QR+LPRP Sbjct: 530 EARELLERKRRTQVMQRDLPRP 551
BLAST of FC932249 vs. ExPASy Swiss-Prot
Match: CEF1_USTMA (Pre-mRNA-splicing factor CEF1 OS=Ustilago maydis GN=CEF1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.507e-11 Identity = 49/133 (36.84%), Postives = 69/133 (51.88%), Query Frame = 3 Query: 15 NLARMRESQTPLLGGENPELHPSDFSGV-TPKKREIQTPNPILTPSATPGGMGSTPRIGMTPSRDGSSF----GVTPKGTPIRDELHINEDLDM---HDSAKLEQRRQAELRRNLRLGLTSLPQPTNEYQIVV 389 +L + QTPLLG N +L S SG+ TP QTPNP+LTP R G TP+ S TP+ TP+RD L +N D H++ + +R ++ + +LR L+SLP P N++ IVV Sbjct: 383 HLRLISSMQTPLLGDVNVDLQSSKSSGIQTPGSFVPQTPNPLLTPGL---------RNGQTPASASDSRLHADTSTPQRTPLRDNLGLNVDDSFQAGHETPRELKRARSLAQSHLRQSLSSLPAPKNDFDIVV 506 The following BLAST results are available for this feature:
BLAST of FC932249 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932249 ID=FC932249; Name=FC932249; organism=Citrus clementina; type=EST; length=675bpback to top |