FC932253
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932253 vs. ExPASy Swiss-Prot
Match: SAR1A_ARATH (GTP-binding protein SAR1A OS=Arabidopsis thaliana GN=SAR1A PE=2 SV=1) HSP 1 Score: 273.863 bits (699), Expect = 4.674e-73 Identity = 138/178 (77.53%), Postives = 144/178 (80.90%), Query Frame = 1 Query: 85 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKATLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELCYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRK 618 MF++DWFYGVLASLGLWQKEAKILFLGLDNAGK TLLHMLKDERLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQIARRVW ERFAESKK +VPFL+LGNKIDIPYAASE+EL YHLGLSNFTTGKGKVNL DSNVRPLEVFMCSIVRK Sbjct: 1 MFMIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLASVPFLILGNKIDIPYAASEDELRYHLGLSNFTTGKGKVNLTDSNVRPLEVFMCSIVRK 178
BLAST of FC932253 vs. ExPASy Swiss-Prot
Match: SAR1A_BRACM (GTP-binding protein SAR1A OS=Brassica campestris GN=SAR1A PE=2 SV=1) HSP 1 Score: 268.47 bits (685), Expect = 1.964e-71 Identity = 136/178 (76.40%), Postives = 142/178 (79.78%), Query Frame = 1 Query: 85 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKATLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELCYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRK 618 MF++DWFYGVLASLGLWQKEAKILFLGLDNAGK TLLHMLKDERLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQIARRVW ERFAESKK VPFL+LGNKIDIPYAASE+EL YHLGLSNFTTGKGKV+L SNVRPLEVFMCSIVRK Sbjct: 1 MFVIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLATVPFLILGNKIDIPYAASEDELRYHLGLSNFTTGKGKVDLVGSNVRPLEVFMCSIVRK 178
BLAST of FC932253 vs. ExPASy Swiss-Prot
Match: SAR1B_ARATH (GTP-binding protein SAR1B OS=Arabidopsis thaliana GN=SAR1B PE=2 SV=1) HSP 1 Score: 266.159 bits (679), Expect = 9.746e-71 Identity = 134/178 (75.28%), Postives = 140/178 (78.65%), Query Frame = 1 Query: 85 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKATLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELCYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRK 618 MFL DWFYG+LASLGLWQKEAKILFLGLDNAGK TLLHMLKDERLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQIARRVW ERFAESK+ VPFL+LGNKIDIPYAASE+EL YHLGL+NFTTGKGKV L DS VRPLEVFMCSIVRK Sbjct: 1 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKRELDALLSDEALATVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVTLGDSGVRPLEVFMCSIVRK 178
BLAST of FC932253 vs. ExPASy Swiss-Prot
Match: SAR2_SOLLC (GTP-binding protein SAR2 OS=Solanum lycopersicum GN=SAR2 PE=2 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 5.348e-69 Identity = 130/178 (73.03%), Postives = 139/178 (78.09%), Query Frame = 1 Query: 85 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKATLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELCYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRK 618 MFL+DWFYGVLASLGLWQK+AKILFLGLDNAGK TLLHMLKDERLVQHQPTQYPTSEELSIG IKFKAFDLGGHQIARRVW ERF E+KK NVPFL+LGNKIDIPYAASE+EL YHLGL+ TTGKG +NLA +NVRP+EVFMCSIVRK Sbjct: 1 MFLVDWFYGVLASLGLWQKDAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGNIKFKAFDLGGHQIARRVWRDYYAKVDAVVYLVDANDRERFPEAKKELDGLLSDESLTNVPFLILGNKIDIPYAASEDELRYHLGLTGVTTGKGNINLAGTNVRPIEVFMCSIVRK 178
BLAST of FC932253 vs. ExPASy Swiss-Prot
Match: SAR1B_BRACM (GTP-binding protein SAR1B OS=Brassica campestris GN=SAR1B PE=2 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 2.654e-68 Identity = 133/180 (73.89%), Postives = 139/180 (77.22%), Query Frame = 1 Query: 85 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKATLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELCYHLGLSNFTTGKGKVNLA--DSNVRPLEVFMCSIVRK 618 MFL DWFYG+LASLGLWQKEAKILFLGLDNAGK TLLHMLKDERLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQIARRVW ERF+ESKK VPFL+LGNKID PYAASE+EL YHLGL+NFTTGKGKV A DS VRPLEVFMCSIVRK Sbjct: 1 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFSESKKELDALLSDDALATVPFLILGNKIDNPYAASEDELRYHLGLTNFTTGKGKVTTAGGDSGVRPLEVFMCSIVRK 180
BLAST of FC932253 vs. ExPASy Swiss-Prot
Match: SAR1_TOBAC (GTP-binding protein SAR1 OS=Nicotiana tabacum GN=SAR1 PE=2 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 8.289e-54 Identity = 115/183 (62.84%), Postives = 127/183 (69.40%), Query Frame = 1 Query: 85 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKATLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGN---KIDIPYAASEE-ELCYHLGLSNFT-TGKGKVNLADSNVRPLEVFMCSIVRK 618 MFL+DWFYG+LA+LGLWQKEAKILFLGLDNAGK TLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVW ERFAESKK FL L N +I+ P + YH+G + + +GKVNLADSNVRP+EVFMCSIVR+ Sbjct: 1 MFLVDWFYGILATLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDSFDKERFAESKKELDALLSGWSSLAHCFLFLDNWVTRIEHPICCLRKMNWRYHMGANGASPLARGKVNLADSNVRPVEVFMCSIVRQ 183
BLAST of FC932253 vs. ExPASy Swiss-Prot
Match: SAR1_YARLI (Small COPII coat GTPase SAR1 OS=Yarrowia lipolytica GN=SAR1 PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 6.361e-46 Identity = 99/178 (55.62%), Postives = 116/178 (65.17%), Query Frame = 1 Query: 85 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKATLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELCYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRK 618 M++++WFY VL+SLGLW K AK+LFLGLDNAGK TLLHMLK++R+ PT +PTSEELSIG KF FDLGGH ARRVW RFAESK VPFL+LGNKID+P A SE EL LGL TTGKGKV L + N+RP+E+FMCSIV + Sbjct: 1 MWIVNWFYDVLSSLGLWNKNAKLLFLGLDNAGKTTLLHMLKNDRMAVSNPTVHPTSEELSIGNCKFTTFDLGGHIQARRVWKDYFPEVNGIVFLVDAADPTRFAESKAELDSLLAIEQLKTVPFLILGNKIDMPQAVSELELKDALGLYQ-TTGKGKVPL-EGNIRPIEIFMCSIVMR 176
BLAST of FC932253 vs. ExPASy Swiss-Prot
Match: SAR1_USTMA (Small COPII coat GTPase SAR1 OS=Ustilago maydis GN=SAR1 PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.417e-45 Identity = 96/178 (53.93%), Postives = 119/178 (66.85%), Query Frame = 1 Query: 85 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKATLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELCYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRK 618 MF+++WF+ +LA LGL K AKILFLGLDNAGK TLLHMLK++RL QPT +PTSEEL+IG++KF +DLGGHQ ARR+W ERFAE++ +VPFL+LGNKID P A SEEEL +GL TTGKGKV L D +RP+E+FMCS+V + Sbjct: 1 MFIINWFWDILAQLGLAHKNAKILFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGQVKFTTYDLGGHQQARRLWKDYFPEVDGIVFLVDTQDHERFAEARAELDALLSIEELSSVPFLILGNKIDAPGAVSEEELRQAIGLYQ-TTGKGKVPLKD--IRPIEIFMCSVVMR 175
BLAST of FC932253 vs. ExPASy Swiss-Prot
Match: SAR1_CRYNE (Small COPII coat GTPase SAR1 OS=Cryptococcus neoformans GN=SAR1 PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 5.385e-45 Identity = 97/178 (54.49%), Postives = 117/178 (65.73%), Query Frame = 1 Query: 85 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKATLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELCYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRK 618 MF+++WF+ VLASLGL K AK+LFLGLDNAGK TLLHMLK++RL QPT +PTSEEL+IG +KF +DLGGH ARR+W ERFAESK VPFL+LGNKID A SEE+L + LGL TTGKGK+ L D +RP+EVFMCS+V + Sbjct: 1 MFIINWFWDVLASLGLMNKSAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGNVKFTTYDLGGHIQARRLWRDYFPEVDGIVFLVDSADAERFAESKAELDSLLSIESLAQVPFLILGNKIDAYGAVSEEQLRHELGLYQ-TTGKGKIPLRD--IRPIEVFMCSVVMR 175
BLAST of FC932253 vs. ExPASy Swiss-Prot
Match: SAR1_NEOFI (Small COPII coat GTPase sar1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=sar1 PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 9.185e-45 Identity = 97/178 (54.49%), Postives = 116/178 (65.17%), Query Frame = 1 Query: 85 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKATLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELCYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRK 618 M++++WFY VLASLGL K AK+LFLGLDNAGK TLLHMLK++R+ QPT +PTSEEL+IG +F FDLGGHQ ARR+W ERF ESK VPFL+LGNKID P A SE+EL + LGL TTGKGKV L +RP+EVFMCS+V + Sbjct: 1 MWIINWFYDVLASLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVATLQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDELRHQLGLYQ-TTGKGKVPL--EGIRPIEVFMCSVVMR 175 The following BLAST results are available for this feature:
BLAST of FC932253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932253 ID=FC932253; Name=FC932253; organism=Citrus clementina; type=EST; length=620bpback to top |