FC932278

Overview
NameFC932278
Unique NameFC932278
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932278 vs. ExPASy Swiss-Prot
Match: CPIN1_BOVIN (Anamorsin OS=Bos taurus GN=CIAPIN1 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.518e-23
Identity = 83/264 (31.44%), Postives = 120/264 (45.45%), Query Frame = 1
Query:    7 SSLSQLPVESFSIDTVLS--ISSSHELPGDQLLEEISRVLKPGGTILIYKKLTS--VKGDVDKAISPLEGKLLLAGFLDAQRIQLKSVVPAEV--------------VSFGVKGKKPTWKIGSSFAIKK--APKSLAXXXXXXXXXXXXXXXXXXXXXXXXPQLPS------------------VGDCEVGSTRKACKNCICGRAEAEEKVEKLGLTMDQLKN-PQSACGSCGLGDAFRCGTCPYKGLPPIQLGEKVSLSSNFL 681
            + L Q   +  S D VLS  I  S  L    +L E++R+L+PGG + + + + +  V     K  S L   L L+G ++ + +Q +S+ P E+              +S  + GKKP +++GSS  +K   A KS                            + S                     C  G  RKACKNC CG AE  EK +    + DQ+ + P+SACG+C LGDAFRC +CPY G+P  + GEKV LS + L
Sbjct:   48 NQLLQSAHKESSFDIVLSGIIPGSTTLHSADILAEMARILRPGGCLFLKEPVETAVVNNSKVKTASKLCSALTLSGLVEVKELQRESLSPEEIQSVREHLGYHSDSLLSLQITGKKPNFEVGSSSQLKLSIAKKSSGKPAVDPAAAKLWTLSANDMEDESVDLIDSDELLDAEDLKKPDPASLRAPSCGEGKKRKACKNCTCGLAEELEKEK----SRDQISSQPKSACGNCYLGDAFRCASCPYLGMPAFKPGEKVLLSDSNL 307          
BLAST of FC932278 vs. ExPASy Swiss-Prot
Match: CPIN1_MOUSE (Anamorsin OS=Mus musculus GN=Ciapin1 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.857e-22
Identity = 78/263 (29.66%), Postives = 115/263 (43.73%), Query Frame = 1
Query:    7 SSLSQLPVESFSIDTVLS--ISSSHELPGDQLLEEISRVLKPGGTILIYKKLTS--VKGDVDKAISPLEGKLLLAGFLDAQRIQLKSVVPAEVVSFG--------------VKGKKPTWKIGSSFAIKKAPKSLAXXXXXXXXXXXXXXXXXXXXXXXX--------------------PQLPSVGDCEVGSTRKACKNCICGRAEAEEKVEKLGLTMDQLKNPQSACGSCGLGDAFRCGTCPYKGLPPIQLGEKVSLSSNFL 681
            + L Q   +  S D +LS  +  S  L   ++L E++R+L+PGG + + + + +  V  D  K  S L   L L+G ++ + +Q +++ P EV S                V GKKP +++GSS  +K   K  +                                            P       C  G  RKACKNC CG AE  E+ +       Q   P+SACG+C LGDAFRC  CPY G+P  + GE+V LS++ L
Sbjct:   48 TQLLQSSHKESSFDVILSGVVPGSTSLHSAEVLAEMARILRPGGCLFLKEPVETAEVNNDKMKTASKLCSALTLSGLVEIKELQREALSPEEVQSVQEHLGYHSDSLRSVRVTGKKPNFEVGSSSQLKLPNKKSSSVKPVVDPAAAKLWTLSANDMEDDSVDLIDSDELLDPEDLKRPDPASLKAPSCGEGKKRKACKNCTCGLAEELEREQSKA----QSSQPKSACGNCYLGDAFRCANCPYLGMPAFKPGEQVLLSNSNL 306          
BLAST of FC932278 vs. ExPASy Swiss-Prot
Match: CPIN1_HUMAN (Anamorsin OS=Homo sapiens GN=CIAPIN1 PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.852e-21
Identity = 81/254 (31.89%), Postives = 116/254 (45.67%), Query Frame = 1
Query:   40 SIDTVLS--ISSSHELPGDQLLEEISRVLKPGGTILIYKKL-TSVKGDVD-KAISPLEGKLLLAGFLDAQRIQLKSVVPAEVVSFG--------------VKGKKPTWKIGSSFAIK-----KAPKSL---------------AXXXXXXXXXXXXXXXXXXXXXXXXPQLPSV--GDCEVGSTRKACKNCICGRAEAEEKVEKLGLTMDQLKNPQSACGSCGLGDAFRCGTCPYKGLPPIQLGEKVSLSSNFL 681
            S D +LS  +  S  L   ++L EI+R+L+PGG + + + + T+V  +   K  S L   L L+G ++ + +Q + + P EV S                + GKKP +++GSS  +K     K+  S+               A                        P   S+    C  G  RKACKNC CG AE  EK +       Q   P+SACG+C LGDAFRC +CPY G+P  + GEKV LS + L
Sbjct:   59 SFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGLVEVKELQREPLTPEEVQSVREHLGHESDNLLFVQITGKKPNFEVGSSRQLKLSITKKSSPSVKPAVDPAAAKLWTLSANDMEDDSMDLIDSDELLDPEDLKKPDPASLRAASCGEGKKRKACKNCTCGLAEELEKEKSREQMSSQ---PKSACGNCYLGDAFRCASCPYLGMPAFKPGEKVLLSDSNL 309          
BLAST of FC932278 vs. ExPASy Swiss-Prot
Match: YO97_CAEEL (Uncharacterized protein T20B12.7 OS=Caenorhabditis elegans GN=T20B12.7 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.841e-15
Identity = 38/75 (50.67%), Postives = 50/75 (66.67%), Query Frame = 1
Query:  448 GDCEVGSTRKACKNCICGRAEAEEKVEKLGLTMDQLKNPQSACGSCGLGDAFRCGTCPYKGLPPIQLGEKVSLSS 672
            G  +    ++ACKNC CG AE EE +EK+G    +   P+S+CG+C LGDAFRC TCPY G PP + GE V +S+
Sbjct:  164 GPDDPNKKKRACKNCSCGLAEQEE-LEKMGQIAAE---PKSSCGNCSLGDAFRCSTCPYLGQPPFKPGETVKIST 234          
BLAST of FC932278 vs. ExPASy Swiss-Prot
Match: DRE2_NEUCR (Protein dre-2 OS=Neurospora crassa GN=dre-2 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.211e-13
Identity = 39/90 (43.33%), Postives = 51/90 (56.67%), Query Frame = 1
Query:  463 GSTRKACKNCICG---RAEAEEKV--EKLGLTMDQLK--------------NPQSACGSCGLGDAFRCGTCPYKGLPPIQLGEKVSLSSN 675
            G  R+ACK+C CG   R EAE+K   +K    ++ LK                  +CGSC LGDAFRC  CPY GLPP ++GE+VS+ +N
Sbjct:  240 GKKRRACKDCTCGLAERLEAEDKARRDKADQALNTLKLKSEDLLELDLTVPGKTGSCGSCALGDAFRCAGCPYLGLPPFKVGEEVSILNN 329          
BLAST of FC932278 vs. ExPASy Swiss-Prot
Match: DRE2_SCHPO (Protein dre2 OS=Schizosaccharomyces pombe GN=dre2 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.018e-11
Identity = 59/213 (27.70%), Postives = 85/213 (39.91%), Query Frame = 1
Query:   94 LLEEISRVLKPGGTILIYKKLTSVKGDVDKAISPLEGKLLLAGFLDAQRIQLKSVVPAEVVSFGVKGKKPTWKIGSSFAIKKAPKSLAXXXXXXXXXXXXXXXXXXXXXXXXPQLPSVGDC--EVGSTRKACKNCICGRAEAEE--------KVEKLGLTMD---------QLKNPQSACGSCGLGDAFRCGTCPYKGLPPIQLGEKVSLSSN 675
            +L +    + PGGT+ +Y          D+A    E   LL+G+L   +       P +V +  +K      +  S   I    KS                            +  V +C  E G  ++ACKNC CG  E EE        ++E + LT           + KN  S+CG+C LGDAFRC  CPY G+P    G+ V L+ N
Sbjct:   72 ILSQAFASVHPGGTLRVYST-------ADEADESFEMTALLSGWLIESKSPWILSRPNQVEAVPIKLSNKNGQSASKNKILDFLKSDKENLISGDDDQELIDEDELLDESAHDNVLKVPECKPEPGKKKRACKNCTCGLREMEEHESSKTSAQLEAVKLTDTTEVDFTEKLKSKNAVSSCGNCYLGDAFRCSGCPYIGMPAFNPGDTVILAEN 277          
BLAST of FC932278 vs. ExPASy Swiss-Prot
Match: DRE2_COCIM (Protein DRE2 OS=Coccidioides immitis GN=DRE2 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.330e-11
Identity = 37/92 (40.22%), Postives = 50/92 (54.35%), Query Frame = 1
Query:  457 EVGSTRKACKNCICG------------RAEAEEKVEKLGLTMDQL-------KNPQSACGSCGLGDAFRCGTCPYKGLPPIQLGEKVSLSSN 675
            + G  R+ACK+C CG            RA+A+  +E + L   +L       +    +CG+C LGDAFRC  CPY GLPP + GE+V L SN
Sbjct:  226 KAGKRRRACKDCTCGLAERLREEDKAARAKADATLETMKLAPKELAEVDFTVQGKLGSCGNCALGDAFRCDGCPYIGLPPFKPGEEVRLLSN 317          
BLAST of FC932278 vs. ExPASy Swiss-Prot
Match: DRE2_NEOFI (Protein dre2 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dre2 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.737e-11
Identity = 36/92 (39.13%), Postives = 51/92 (55.43%), Query Frame = 1
Query:  457 EVGSTRKACKNCICG------------RAEAEEKVEKLGLTMDQL-------KNPQSACGSCGLGDAFRCGTCPYKGLPPIQLGEKVSLSSN 675
            + G  R+ACK+C CG            RA+A+E+++ + L  D L       +    +CG+C LGDAFRC  CP+ GLP  Q GE+V L +N
Sbjct:  225 KAGKRRRACKDCTCGLAQKLQEEDAVKRADADEQLDAMKLLHDDLAEVDFTVRGKVGSCGNCSLGDAFRCEGCPFIGLPAFQPGEEVRLLNN 316          
BLAST of FC932278 vs. ExPASy Swiss-Prot
Match: DRE2_YARLI (Protein DRE2 OS=Yarrowia lipolytica GN=DRE2 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.870e-11
Identity = 34/80 (42.50%), Postives = 41/80 (51.25%), Query Frame = 1
Query:  472 RKACKNCICGRAEAEEKVEKLGLTMDQ---------------LKNPQSACGSCGLGDAFRCGTCPYKGLPPIQLGEKVSL 666
            RKACK+C CG  E EE+ +   L                   ++     CGSC LGDAFRC  CPY GLPP + GE VS+
Sbjct:  195 RKACKDCTCGLKEMEEQAKDAQLAAQNTVTLSAEDTAEIDFTVQGKTGGCGSCALGDAFRCDGCPYLGLPPFKPGEAVSI 274          
BLAST of FC932278 vs. ExPASy Swiss-Prot
Match: DRE2_SCLS1 (Protein dre2 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=dre2 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.054e-11
Identity = 36/90 (40.00%), Postives = 48/90 (53.33%), Query Frame = 1
Query:  463 GSTRKACKNCICG------------RAEAEEKVEKLGLTMDQL-------KNPQSACGSCGLGDAFRCGTCPYKGLPPIQLGEKVSLSSN 675
            G  R+ACK+C CG            RA A+ +++ L L  D L       K    +CG+C LGDAFRC  CPY G+P  + GE+V L +N
Sbjct:  257 GKRRRACKDCTCGLAEKLAKEDAEKRATADSQLQALKLDADDLAEVDFTVKGKVGSCGNCSLGDAFRCDGCPYIGMPAFKPGEEVRLLNN 346          
The following BLAST results are available for this feature:
BLAST of FC932278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
CPIN1_BOVIN7.518e-2331.44Anamorsin OS=Bos taurus GN=CIAPIN1 PE=2 SV=1[more]
CPIN1_MOUSE2.857e-2229.66Anamorsin OS=Mus musculus GN=Ciapin1 PE=2 SV=1[more]
CPIN1_HUMAN1.852e-2131.89Anamorsin OS=Homo sapiens GN=CIAPIN1 PE=1 SV=2[more]
YO97_CAEEL9.841e-1550.67Uncharacterized protein T20B12.7 OS=Caenorhabditis... [more]
DRE2_NEUCR9.211e-1343.33Protein dre-2 OS=Neurospora crassa GN=dre-2 PE=3 S... [more]
DRE2_SCHPO1.018e-1127.70Protein dre2 OS=Schizosaccharomyces pombe GN=dre2 ... [more]
DRE2_COCIM1.330e-1140.22Protein DRE2 OS=Coccidioides immitis GN=DRE2 PE=3 ... [more]
DRE2_NEOFI1.737e-1139.13Protein dre2 OS=Neosartorya fischeri (strain ATCC ... [more]
DRE2_YARLI3.870e-1142.50Protein DRE2 OS=Yarrowia lipolytica GN=DRE2 PE=3 S... [more]
DRE2_SCLS15.054e-1140.00Protein dre2 OS=Sclerotinia sclerotiorum (strain A... [more]
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Properties
Property NameValue
Genbank descriptionC34206H02EF PostHarveN Citrus clementina cDNA clone C34206H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932278 ID=FC932278; Name=FC932278; organism=Citrus clementina; type=EST; length=711bp
CAAGCTTCTTCTCTAAGTCAGCTGCCAGTGGAGTCATTCTCTATAGATAC
TGTCCTCTCCATCTCGAGCTCACATGAGCTTCCTGGTGATCAGCTGCTTG
AGGAAATTTCAAGAGTTTTAAAGCCTGGTGGGACAATTCTGATTTACAAG
AAATTGACGTCTGTTAAAGGGGACGTCGATAAGGCAATCTCTCCTCTTGA
GGGCAAGTTGCTGTTAGCAGGGTTTCTAGATGCACAACGTATTCAACTAA
AATCAGTTGTACCAGCTGAAGTCGTTTCATTTGGGGTAAAGGGTAAGAAG
CCTACATGGAAAATCGGGTCATCCTTTGCTATTAAGAAGGCTCCAAAAAG
CTTAGCGAAACTTAAGGTGGATGATGATTCTGATTTGATTGATGAAGATA
CCCTCTTAACCGAAGAGGATTTGAAGAAACCACAGTTACCATCGGTTGGT
GATTGTGAAGTTGGAAGCACAAGGAAAGCTTGCAAAAACTGCATTTGTGG
TAGGGCTGAGGCAGAGGAGAAAGTAGAAAAGTTGGGATTGACTATGGATC
AGTTGAAGAATCCACAGTCGGCATGTGGGAGTTGTGGACTTGGCGACGCT
TTCCGCTGCGGTACATGCCCTTACAAGGGTCTGCCTCCCATTCAACTGGG
CGAGAAGGTGTCACTGTCAAGCAACTTCCTCGTAGCAGACATTTAGACAC
GAAATTTCGGG
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