FC932331

Overview
NameFC932331
Unique NameFC932331
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length718
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932331 vs. ExPASy Swiss-Prot
Match: PYRC_USTMA (Dihydroorotase OS=Ustilago maydis GN=PYR3 PE=2 SV=2)

HSP 1 Score: 256.914 bits (655), Expect = 7.797e-68
Identity = 122/213 (57.28%), Postives = 157/213 (73.71%), Query Frame = 2
Query:   83 LQGAKLSASADFHVHLRDGPMMELVTPTIRQGGVNTVFVMPNLVPPITTVDRALDYQRRLQALEPNVKFLMSLYLHETVTPETIIEAKKRGISGVKSYPAGVTTNSSSGVVDYTQFYPVFEEMERQNMILNLHGESPSGGD--VTVLSAEERFLPKLFELHSKFPKLRIVLEHCTTAAAVEAVKKCGPTVSGTITAHHLSIIIDSWAGEPFCF 715
            +Q   + A ADFHVHLR G M ELVTP + +GGV+  +VMPNLVPPIT+  +A++Y  RL+AL P   F+ +LYL   +TP  I +A + G+ GVKSYP GVTTNS SG+ DY  +YP+FEEM++ +M+LNLHGE PS  D  + VL+AEE+FL  LF++H +FPKL+IVLEH TT  AVEAVK+CG TV  TIT HHL +I+D WAG+P  F
Sbjct:    3 VQEITIPAPADFHVHLRQGKMSELVTPHVAEGGVSLAYVMPNLVPPITSTQQAMEYLERLRALAPQTMFVGTLYLSPDLTPAEIAKAAQNGVRGVKSYPRGVTTNSDSGIEDYETYYPIFEEMQKHDMVLNLHGELPSNADAGICVLNAEEKFLTHLFKIHGEFPKLKIVLEHATTRKAVEAVKQCGDTVGCTITPHHLELIVDDWAGKPLNF 215          
BLAST of FC932331 vs. ExPASy Swiss-Prot
Match: PYRC_SCHPO (Probable dihydroorotase OS=Schizosaccharomyces pombe GN=ura2 PE=2 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 2.508e-66
Identity = 118/207 (57.00%), Postives = 145/207 (70.05%), Query Frame = 2
Query:   95 KLSASADFHVHLRDGPMMELVTPTIRQGGVNTVFVMPNLVPPITTVDRALDYQRRLQALEPNVKFLMSLYLHETVTPETIIEAKKRGISGVKSYPAGVTTNSSSGVVDYTQFYPVFEEMERQNMILNLHGESPSGGDVTVLSAEERFLPKLFELHSKFPKLRIVLEHCTTAAAVEAVKKCGPTVSGTITAHHLSIIIDSWAGEPFCF 715
            K+   AD HVHLR   M++ V PT+ +GGV+  +VMPNL+PPITTVD  L Y++ ++ L+    +LMSLYL    TPE I EA K+GI GVKSYP G TTNS SGV  Y  FYP F  M+   MILN+HGE P   D TV +AE +FLP L +LH +FPKL+IVLEHCTTA AVEAVK CG +V+GTITAHHL +    W  +P+CF
Sbjct:    4 KIPGLADMHVHLRQDNMLKAVVPTVAEGGVSVAYVMPNLIPPITTVDACLQYKKEIEQLDSKTTYLMSLYLSPETTPEVIYEAAKKGIRGVKSYPKGATTNSESGVESYEPFYPTFAAMQETGMILNIHGEVPPSKDNTVFTAEPKFLPTLLDLHQRFPKLKIVLEHCTTADAVEAVKACGESVAGTITAHHLYLTQKDWQDDPYCF 210          
BLAST of FC932331 vs. ExPASy Swiss-Prot
Match: PYRC_YEAST (Dihydroorotase OS=Saccharomyces cerevisiae GN=URA4 PE=1 SV=2)

HSP 1 Score: 223.016 bits (567), Expect = 1.248e-57
Identity = 114/228 (50.00%), Postives = 155/228 (67.98%), Query Frame = 2
Query:   83 LQGAKLSASADFHVHLRDGPMMELVTPTIRQGGVNTVFVMPNLVPPITTVDRALDYQRRLQALEPNVKFLMSLYLHETVTPETIIE-AKKRGISGVKSYPAGVTTNSSSGV--VDYTQFYPVFEEMERQNMILNLHGESPSGGD-----VTVLSAEERFLPKLFELHSKFPKLRIVLEHCTTAAAVEAV--------KKCGPTVSGTITAHHLSIIIDSWAGEP--FC 712
            +Q   L  + D HVH+R+G M ELVTP IR GGV+  ++MPNL PPITT+DR ++Y++ LQ L P   FLMS YL + +TP+ I E A++  I GVK YPAGVTTNS++GV   D++ FYP+F+ M+ +N++LNLHGE PS  D     + VL+AEE FLP L +LH+ FP L+I+LEHCT+ +A++ +        K     V+ T+TAHHL + ID WAG P  FC
Sbjct:    2 VQEIDLGLTCDMHVHVREGAMCELVTPKIRDGGVSIAYIMPNLQPPITTLDRVIEYKKTLQKLAPKTTFLMSFYLSKDLTPDLIHEAAQQHAIRGVKCYPAGVTTNSAAGVDPNDFSAFYPIFKAMQEENLVLNLHGEKPSVHDGDKEPIHVLNAEEAFLPALKKLHNDFPNLKIILEHCTSESAIKTIEDINKNVKKATDVKVAATLTAHHLFLTIDDWAGNPVNFC 229          
BLAST of FC932331 vs. ExPASy Swiss-Prot
Match: PYRC_VIBFM (Dihydroorotase OS=Vibrio fischeri (strain MJ11) GN=pyrC PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.408e-38
Identity = 91/193 (47.15%), Postives = 121/193 (62.69%), Query Frame = 2
Query:  113 DFHVHLRDGPMMELVTPTIRQGGV--NTVFVMPNLVPPITTVDRALDYQRRLQALEPNVKF--LMSLYLHETVTPETIIEAKKRG-ISGVKSYPAGVTTNSSSGVVDYTQFYPVFEEMERQNMILNLHGESPSGGDVTVLSAEERFLPK-LFELHSKFPKLRIVLEHCTTAAAVEAVKKCGPTVSGTITAHHL 673
            D+H+HLRDG   +++T T+R  G       +MPNLVPP+TT ++AL Y+ R+QA   +  F  LMSLYL E  T E I +AK  G I   K YPAG TTNS SGV D  + YP+ + M+ + M+L +HGE  +  DV +   E+ FL   L  + + FP+L+IVLEH TT  A + VK  GP V+ TITAHHL
Sbjct:   11 DWHLHLRDG---DVLTDTVRDSGRYNGRALIMPNLVPPVTTTEQALSYRERIQAENKSDSFAPLMSLYLTEKTTSEEIRKAKATGHIVAAKLYPAGATTNSDSGVSDIKKVYPILKTMQEEGMLLLIHGEVTT-HDVDIFDREKTFLDTVLAPIVNDFPELKIVLEHITTKDAADFVKNAGPNVAATITAHHL 199          
BLAST of FC932331 vs. ExPASy Swiss-Prot
Match: PYRC_VIBF1 (Dihydroorotase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=pyrC PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.434e-37
Identity = 90/193 (46.63%), Postives = 120/193 (62.18%), Query Frame = 2
Query:  113 DFHVHLRDGPMMELVTPTIRQGGV--NTVFVMPNLVPPITTVDRALDYQRRLQALEPNVKF--LMSLYLHETVTPETIIEAKKRG-ISGVKSYPAGVTTNSSSGVVDYTQFYPVFEEMERQNMILNLHGESPSGGDVTVLSAEERFLPK-LFELHSKFPKLRIVLEHCTTAAAVEAVKKCGPTVSGTITAHHL 673
            D+H+HLRDG   +++T T+R  G       +MPNLVPP+TT ++AL Y+ R+QA   +  F  LMSLYL E  T E I +AK  G I   K YPAG TTNS SGV D    YP+ + M+ + M+L +HGE  +  D+ +   E+ FL   L  + + FP+L+IVLEH TT  A + VK  GP V+ TITAHHL
Sbjct:   11 DWHLHLRDG---DVLTDTVRDSGRYNGRALIMPNLVPPVTTTEQALSYRERIQAENKSDSFAPLMSLYLTEKTTSEEIRKAKATGHIVAAKLYPAGATTNSDSGVSDVKNVYPILKTMQEEGMLLLIHGEVTTH-DIDIFDREKTFLDTVLAPIVNDFPELKIVLEHITTKDAADFVKNAGPNVAATITAHHL 199          
BLAST of FC932331 vs. ExPASy Swiss-Prot
Match: PYRC_TERTT (Dihydroorotase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=pyrC PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.195e-37
Identity = 87/191 (45.55%), Postives = 112/191 (58.64%), Query Frame = 2
Query:  113 DFHVHLRDGPMMELVTPTIRQGGVNTVFVMPNLVPPITTVDRALDYQRRLQA---LEPNVKFLMSLYLHETVTPETIIEAKKRGISGVKSYPAGVTTNSSSGVVDYTQFYPVFEEMERQNMILNLHGESPSGGDVTVLSAEERFLPK-LFELHSKFPKLRIVLEHCTTAAAVEAVKKCGPTVSGTITAHHL 673
            D+H+HLRDG  +E   P         + +MPNLVPP+T  + AL Y+ R++A    E   + LM LYL    TPETI  AK  G+   K YPAG TTNS+SGV D    YP  EEMERQ ++L LHGE      + +   E  F+ + L ++ + FPKL+IVLEH TT  A E V +    V+ TITAHHL
Sbjct:   12 DWHIHLRDGTALETTVPHAAASFARAI-IMPNLVPPVTNAEEALAYRARIEAQIPAETPFEPLMVLYLTNNTTPETIAAAKAAGVVACKLYPAGATTNSASGVTDIQHIYPALEEMERQGVLLLLHGEVTDSA-IDIFDREAVFIERTLRKVVADFPKLKIVLEHITTQQAAEFVAQAPDNVAATITAHHL 200          
BLAST of FC932331 vs. ExPASy Swiss-Prot
Match: PYRC_ALISL (Dihydroorotase OS=Aliivibrio salmonicida (strain LFI1238) GN=pyrC PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.296e-37
Identity = 87/193 (45.08%), Postives = 121/193 (62.69%), Query Frame = 2
Query:  113 DFHVHLRDGPMMELVTPTIRQGGV--NTVFVMPNLVPPITTVDRALDYQRRLQALEPNVKF--LMSLYLHETVTPETIIEAKKRG-ISGVKSYPAGVTTNSSSGVVDYTQFYPVFEEMERQNMILNLHGESPSGGDVTVLSAEERFLPK-LFELHSKFPKLRIVLEHCTTAAAVEAVKKCGPTVSGTITAHHL 673
            D+H+HLRDG   +++T T+R  G       +MPNLVPP+ T ++AL Y+ R+QA+  +  F  +MSLYL E  T + I +AK  G I   K YPAG TTNS SGV D  + YP+ + M+ + M+L +HGE  +  D+ +   E+ FL   L  + + FP+L+IVLEH TT  A + VK  GP V+ TITAHHL
Sbjct:   11 DWHLHLRDG---DVLTDTVRDSGRYNGRALIMPNLVPPVITTEQALSYRERIQAVNSSNTFAPIMSLYLTEKTTSDEIRKAKATGYIVAAKLYPAGATTNSDSGVSDVQKVYPILKTMQEEGMLLLIHGEVTT-HDIDIFDREKTFLDTVLAPIVNDFPELKIVLEHITTKDAADFVKNAGPNVAATITAHHL 199          
BLAST of FC932331 vs. ExPASy Swiss-Prot
Match: PYRC_AZOSE (Dihydroorotase OS=Azoarcus sp. (strain EbN1) GN=pyrC PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.662e-35
Identity = 90/203 (44.33%), Postives = 122/203 (60.10%), Query Frame = 2
Query:   83 LQGAKLSASADFHVHLRDGPMMELVTP-TIRQGGVNTVFVMPNLVPPITTVDRALDYQRR-LQALEPNVKF--LMSLYLHETVTPETIIEAKKRG-ISGVKSYPAGVTTNSSSGVVDYTQFYPVFEEMERQNMILNLHGESPSGGDVTVLSAEERFLPK-LFELHSKFPKLRIVLEHCTTAAAVEAVKKCGPTVSGTITAHHL 673
            +Q   L    D+H+H+RDG  +  V P T R+ G     +MPNL PP+TT  +AL+Y+ R L A+ P   F  LMSLYL +  +P+ I  AK  G +  VK YPAG TTNS +GV    + + V E ME+  M+L +HGE  + GDV V   E+ F+ + L  L ++FP LR+V EH TTA A   V+  GP V+ T+TAHHL
Sbjct:    1 MQTISLIRPDDWHLHVRDGAALATVVPHTARRFG--RALIMPNLRPPVTTAAQALEYRARILAAVPPGQHFEPLMSLYLTDNTSPDEIDRAKASGAVVAVKLYPAGATTNSDAGVTAIEKVHAVLERMEKLGMVLCVHGEV-THGDVDVFDREQVFIEQVLAPLVARFPALRVVFEHITTAEAARFVQDAGPNVAATVTAHHL 200          
BLAST of FC932331 vs. ExPASy Swiss-Prot
Match: PYRC_VIBCH (Dihydroorotase OS=Vibrio cholerae GN=pyrC PE=3 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 1.136e-34
Identity = 86/192 (44.79%), Postives = 116/192 (60.42%), Query Frame = 2
Query:  113 DFHVHLRDGPMM-ELVTPTIRQGGVNTVFVMPNLVPPITTVDRALDYQRRLQALEPNVKF--LMSLYLHETVTPETIIEAKKRG-ISGVKSYPAGVTTNSSSGVVDYTQFYPVFEEMERQNMILNLHGESPSGGDVTVLSAEERFLPK-LFELHSKFPKLRIVLEHCTTAAAVEAVKKCGPTVSGTITAHHL 673
            D+HVHLRDG ++ + V    R  G     +MPN VPP+TT + AL Y+ R+ A +P   F  LM+LYL +  +PE I +AK  G +   K YPAG TTNS SGV      YPV + M+   M+L +HGE  +  +V +   E+ FL   L  + + FP+L+IVLEH TTA AV  V++ G  V+ TITAHHL
Sbjct:   11 DWHVHLRDGDVLADTVRDISRYNG--RALIMPNTVPPVTTTEMALAYRERIMAAQPQAHFEPLMALYLTDNTSPEEIRKAKASGKVVAAKLYPAGATTNSDSGVTSAKNIYPVLQAMQEVGMLLLVHGEVTTH-EVDIFDREKTFLDTVLAPIVNDFPQLKIVLEHITTADAVTFVQQAGDNVAATITAHHL 199          
BLAST of FC932331 vs. ExPASy Swiss-Prot
Match: PYRC_VIBVY (Dihydroorotase OS=Vibrio vulnificus (strain YJ016) GN=pyrC PE=3 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 2.143e-33
Identity = 86/192 (44.79%), Postives = 113/192 (58.85%), Query Frame = 2
Query:  113 DFHVHLRDGPMM-ELVTPTIRQGGVNTVFVMPNLVPPITTVDRALDYQRRLQALEPNVKF--LMSLYLHETVTPETIIEAKKRG-ISGVKSYPAGVTTNSSSGVVDYTQFYPVFEEMERQNMILNLHGESPSGGDVTVLSAEERFLPK-LFELHSKFPKLRIVLEHCTTAAAVEAVKKCGPTVSGTITAHHL 673
            D+HVHLRDG ++ + V    R  G     +MPN VPP+TT + AL Y+ R+QA     +F  LMSLYL +  T + + +AK  G +   K YPAG TTNS SGV D  + YPV + M+   M+L +HGE  +  DV +   E+ FL   L  +   FP L+IVLEH TT+ AV  VK     V+ TITAHHL
Sbjct:   11 DWHVHLRDGEVLADTVRDISRYNG--RALIMPNTVPPVTTTEMALAYRDRIQAHNQTEQFSPLMSLYLTDNTTADEVRKAKASGAVVAAKLYPAGATTNSDSGVTDVKKIYPVLQAMQEVGMLLLVHGEVTT-HDVDIFDREKTFLDNVLAPIVQDFPDLKIVLEHITTSDAVVFVKNANENVAATITAHHL 199          
The following BLAST results are available for this feature:
BLAST of FC932331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 196
Match NameE-valueIdentityDescription
PYRC_USTMA7.797e-6857.28Dihydroorotase OS=Ustilago maydis GN=PYR3 PE=2 SV=... [more]
PYRC_SCHPO2.508e-6657.00Probable dihydroorotase OS=Schizosaccharomyces pom... [more]
PYRC_YEAST1.248e-5750.00Dihydroorotase OS=Saccharomyces cerevisiae GN=URA4... [more]
PYRC_VIBFM8.408e-3847.15Dihydroorotase OS=Vibrio fischeri (strain MJ11) GN... [more]
PYRC_VIBF11.434e-3746.63Dihydroorotase OS=Vibrio fischeri (strain ATCC 700... [more]
PYRC_TERTT3.195e-3745.55Dihydroorotase OS=Teredinibacter turnerae (strain ... [more]
PYRC_ALISL9.296e-3745.08Dihydroorotase OS=Aliivibrio salmonicida (strain L... [more]
PYRC_AZOSE6.662e-3544.33Dihydroorotase OS=Azoarcus sp. (strain EbN1) GN=py... [more]
PYRC_VIBCH1.136e-3444.79Dihydroorotase OS=Vibrio cholerae GN=pyrC PE=3 SV=... [more]
PYRC_VIBVY2.143e-3344.79Dihydroorotase OS=Vibrio vulnificus (strain YJ016)... [more]

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Properties
Property NameValue
Genbank descriptionC34207D12EF PostHarveN Citrus clementina cDNA clone C34207D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932331 ID=FC932331; Name=FC932331; organism=Citrus clementina; type=EST; length=718bp
GGAACCTATCGGCATTTCAGGGATTTCACCGTTGCAATTGGTGCTTGATT
GGCTTTGATTTTGAATAATGCCTCTTTCCAAGCTGCAGGGAGCAAAGCTC
TCCGCCTCGGCCGACTTCCATGTCCATCTTCGCGATGGTCCAATGATGGA
GTTGGTGACTCCCACTATCCGACAGGGAGGTGTGAACACCGTTTTTGTTA
TGCCCAACCTTGTGCCACCTATCACAACCGTCGACCGTGCTCTAGACTAC
CAGAGGCGCCTCCAAGCCCTCGAGCCGAATGTCAAATTCCTTATGTCGCT
GTACCTCCACGAGACTGTGACCCCGGAGACCATCATTGAAGCCAAGAAGC
GGGGCATCAGTGGTGTCAAGAGCTACCCGGCCGGTGTGACGACCAACTCC
TCTTCCGGCGTGGTTGACTACACGCAGTTCTACCCTGTCTTCGAGGAGAT
GGAGCGACAAAACATGATTCTGAACCTGCACGGAGAAAGTCCCTCCGGGG
GCGATGTGACAGTGTTGTCCGCGGAAGAGCGATTCCTTCCCAAGCTCTTT
GAGCTGCACTCCAAATTCCCCAAGCTGCGCATAGTTTTGGAGCACTGCAC
CACTGCTGCGGCTGTGGAGGCAGTAAAGAAGTGTGGTCCAACGGTTTCTG
GTACCATCACAGCTCATCACCTATCAATTATCATCGATTCGTGGGCCGGC
GAACCATTCTGCTTTCTG
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