FC932369
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932369 vs. ExPASy Swiss-Prot
Match: PSD13_BOVIN (26S proteasome non-ATPase regulatory subunit 13 OS=Bos taurus GN=PSMD13 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.234e-13 Identity = 36/91 (39.56%), Postives = 55/91 (60.44%), Query Frame = 3 Query: 117 YLESLRNDHPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITDFETKINLLKLAHFAVIISRQYPEKQAAISYL 389 +L+ ++ P ++ L +LY KKLWHQLTL++ FV F GD LI+LY NFI++FE ++N L L + + RQ + A+S+L Sbjct: 7 FLQQSQSSGPGQAAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISEFEHRVNPLSLVEIILHVVRQMTDPNVALSFL 97
BLAST of FC932369 vs. ExPASy Swiss-Prot
Match: PSD13_RAT (26S proteasome non-ATPase regulatory subunit 13 OS=Rattus norvegicus GN=Psmd13 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.749e-13 Identity = 35/91 (38.46%), Postives = 55/91 (60.44%), Query Frame = 3 Query: 117 YLESLRNDHPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITDFETKINLLKLAHFAVIISRQYPEKQAAISYL 389 +L+ ++ P ++ L +LY KKLWHQLTL++ FV F GD LI+LY NFI++FE ++N L L + + RQ + A+++L Sbjct: 7 FLQQSQSSGPGQAAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISEFEHRVNPLSLVEIILHVVRQMTDPNVALTFL 97
BLAST of FC932369 vs. ExPASy Swiss-Prot
Match: PSD13_MOUSE (26S proteasome non-ATPase regulatory subunit 13 OS=Mus musculus GN=Psmd13 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.749e-13 Identity = 35/91 (38.46%), Postives = 55/91 (60.44%), Query Frame = 3 Query: 117 YLESLRNDHPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITDFETKINLLKLAHFAVIISRQYPEKQAAISYL 389 +L+ ++ P ++ L +LY KKLWHQLTL++ FV F GD LI+LY NFI++FE ++N L L + + RQ + A+++L Sbjct: 7 FLQQSQSSGPGQAAVWHRLEELYTKKLWHQLTLEVLDFVQDPCFAQGDGLIKLYENFISEFEHRVNPLSLVEIILHVVRQMTDPNVALTFL 97
BLAST of FC932369 vs. ExPASy Swiss-Prot
Match: PSD13_HUMAN (26S proteasome non-ATPase regulatory subunit 13 OS=Homo sapiens GN=PSMD13 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.690e-13 Identity = 35/91 (38.46%), Postives = 55/91 (60.44%), Query Frame = 3 Query: 117 YLESLRNDHPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITDFETKINLLKLAHFAVIISRQYPEKQAAISYL 389 +L+ ++ P ++ L +LY KKLWHQLTL++ FV F GD LI+LY NFI++FE ++N L L + + RQ + A+++L Sbjct: 7 FLQQSQSSGPGQPAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISEFEHRVNPLSLVEIILHVVRQMTDPNVALTFL 97
BLAST of FC932369 vs. ExPASy Swiss-Prot
Match: PSD13_CHICK (26S proteasome non-ATPase regulatory subunit 13 OS=Gallus gallus GN=PSMD13 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.690e-13 Identity = 35/91 (38.46%), Postives = 55/91 (60.44%), Query Frame = 3 Query: 117 YLESLRNDHPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITDFETKINLLKLAHFAVIISRQYPEKQAAISYL 389 +L+ ++ P ++ L +LY KKLWHQLTL++ FV F GD LI+LY NFI++FE ++N L L + + RQ + A+++L Sbjct: 7 FLQQSQSAGPGQAAVWHRLEELYNKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISEFEHRVNPLSLVEIILHVVRQMTDPTVALTFL 97
BLAST of FC932369 vs. ExPASy Swiss-Prot
Match: PSD13_DICDI (26S proteasome non-ATPase regulatory subunit 13 OS=Dictyostelium discoideum GN=psmD13 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.573e-11 Identity = 31/83 (37.35%), Postives = 45/83 (54.22%), Query Frame = 3 Query: 111 LQYLESLRNDHPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITDFETKINLLKLAHFAVIISRQY 359 L+YLE L+ P+L + N + D Y+ KLWHQLT ++E + L Y NFI DFE K+ L L + ++RQ+ Sbjct: 7 LEYLEHLKKIVPDLSDQINNIKDTYENKLWHQLTKQIEMIIISPQLLEKKELFNFYTNFIRDFENKLRPLSLVEICIAVARQF 89 The following BLAST results are available for this feature:
BLAST of FC932369 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932369 ID=FC932369; Name=FC932369; organism=Citrus clementina; type=EST; length=390bpback to top |