FC932391
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932391 vs. ExPASy Swiss-Prot
Match: RING4_ARATH (E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana GN=At4g11680 PE=2 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.741e-48 Identity = 101/170 (59.41%), Postives = 117/170 (68.82%), Query Frame = 3 Query: 159 STDDIVDTTPFLXXXXXXXXXXXXXXXXX---IRRQGLREAARFLRHASSRRTMREPSMMVRETAAEQLEERQSDWAYSKPVVVLDIIWNLAFVAVAFSVMVLSRNERPNMPLGLWIVGYAMQCVLHMVCVCVEYKXXXXXXVSAFGGAEEGNLNSGNTRGDSGEYVSLA 659 ++D I+DTTPFL RRQGLREAARFLRHA SRR MREPSM+VRETAAEQLEERQSDWAYSKPVV LDI+WNLAFVA+ +V++LSR+E+PNMPL +W+VGY +QC LHM CVCVEY+ GG SG T S +YVSLA Sbjct: 28 NSDGIIDTTPFLPPTVTRTISVDEESNPIHRSARRQGLREAARFLRHAGSRRMMREPSMLVRETAAEQLEERQSDWAYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEYRRRRRRRHPEDGG------GSGLTNSSSQQYVSLA 191
BLAST of FC932391 vs. ExPASy Swiss-Prot
Match: RING1_ARATH (E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana GN=At1g12760 PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.291e-43 Identity = 87/145 (60.00%), Postives = 107/145 (73.79%), Query Frame = 3 Query: 129 ATAMSTSTNQSTDDIVDTTPFLXXXXXXXXXXXXXXXXX--IRRQGLREAARFLRHASSRRTMREPSMMVRETAAEQLEERQSDWAYSKPVVVLDIIWNLAFVAVAFSVMVLSRNERPNMPLGLWIVGYAMQCVLHMVCVCVEYK 557 ++ + S++ S+ D +D P L +RRQGLREAARFL ASS R MREPSM+VRE AAEQLEERQSDWAYSKPVVVLDI+WNLAFV+VA +++V+SR E P MPL +W++GYA+QCVLHMVCVCVEY+ Sbjct: 10 SSLIPASSSSSSSDAIDPAPLLFNGDDNEGNNGGGGGERRSVRRQGLREAARFLSRASSGRVMREPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVSVATAILVMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEYR 154
BLAST of FC932391 vs. ExPASy Swiss-Prot
Match: RING2_ARATH (E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana GN=At1g63170 PE=2 SV=2) HSP 1 Score: 172.555 bits (436), Expect = 1.864e-42 Identity = 87/145 (60.00%), Postives = 106/145 (73.10%), Query Frame = 3 Query: 246 IRRQGLREAARFLRHASS-RRTMREPSMMVRETAAEQLEERQSDWAYSKPVVVLDIIWNLAFVAVAFSVMVLSRNERPNMPLGLWIVGYAMQCVLHMVCVCVEYKXXXXXXVSAFGGAEEGNLNSGNTRGDSGEYVSLAINWRKR 677 +RRQGLREAAR LRHASS R MREPSM+VRE AAEQLEERQSDWAYSKPVVVLD +WNLAFV VA +V+VLS +E PNMPL +WI+GY +QC++HMVCVCVEY+ + +S ++ D E + L+ N +R Sbjct: 24 VRRQGLREAARLLRHASSGRMMMREPSMLVREAAAEQLEERQSDWAYSKPVVVLDFVWNLAFVVVATAVLVLSSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNSRRRRDLSPRSSSSSSSSSSSMDEEEGLGLSRNSDER 168 The following BLAST results are available for this feature:
BLAST of FC932391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932391 ID=FC932391; Name=FC932391; organism=Citrus clementina; type=EST; length=701bpback to top |