FC932394

Overview
NameFC932394
Unique NameFC932394
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length692
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932394 vs. ExPASy Swiss-Prot
Match: TLP_ACTDE (Thaumatin-like protein OS=Actinidia deliciosa GN=tlp PE=1 SV=2)

HSP 1 Score: 317.005 bits (811), Expect = 5.967e-86
Identity = 137/192 (71.35%), Postives = 156/192 (81.25%), Query Frame = 2
Query:  116 FDITNNCPDTVWAAAVPGGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVLKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTD 691
            F+I NNCP TVWAAAVPGGG++LD+GQ W I    GTK AR+W RT C FD +G+GKC+TGDCNGLL+CQ +G  PNTLAEYAL QFN++DF D+S +DGFNV MEFS  S  C R IKCTA+I G+CPNEL+ PGGCN PC V KTD+YCCNSGNCG T FSKFFKDRCPD YSYPKDD TSTFTCP GT+
Sbjct:   27 FNIINNCPFTVWAAAVPGGGKRLDRGQNWIINPGAGTKGARVWPRTGCNFDGAGRGKCQTGDCNGLLQCQAFGQPPNTLAEYALNQFNNLDFFDISLVDGFNVAMEFSPTSGGCTRGIKCTADINGQCPNELRAPGGCNNPCTVFKTDQYCCNSGNCGLTNFSKFFKDRCPDAYSYPKDDQTSTFTCPAGTN 218          
BLAST of FC932394 vs. ExPASy Swiss-Prot
Match: P21_SOYBN (Protein P21 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 7.812e-78
Identity = 126/194 (64.95%), Postives = 151/194 (77.84%), Query Frame = 2
Query:  113 KFDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVLKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTD 691
            +F+ITN C  TVWAA+VP GGG QL+ GQ+W++    GTK AR+WART C FD SG+G C+TGDC G+L+C+ YGA PNTLAEY L  FN++DF D+S +DGFNVPM+FS  S  C R I CTA+I G+CP+ELK  GGCN PC V KTD+YCCNSG+CGPT +S+FFK RCPD YSYPKDD  STFTC  GTD
Sbjct:    2 RFEITNRCTYTVWAASVPVGGGVQLNPGQSWSVDVPAGTKGARVWARTGCNFDGSGRGGCQTGDCGGVLDCKAYGAPPNTLAEYGLNGFNNLDFFDISLVDGFNVPMDFSPTSNGCTRGISCTADINGQCPSELKTQGGCNNPCTVFKTDQYCCNSGSCGPTDYSRFFKQRCPDAYSYPKDDPPSTFTCNGGTD 195          
BLAST of FC932394 vs. ExPASy Swiss-Prot
Match: PRR1_TOBAC (Pathogenesis-related protein R major form OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 2.778e-75
Identity = 126/194 (64.95%), Postives = 150/194 (77.32%), Query Frame = 2
Query:  116 FDITNNCPDTVWAAAVPGGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVLKTDEYCCNS--GNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTD 691
            FDI N C  TVWAAA PGGGR+LD GQ+W+I   PGT  ARIW RT C FD SG+G CETGDCNG+LECQGYG APNTLAE+AL Q N  DF+D+S +DGFN+PMEFS  +  C R ++CTA I  +CP +LK  GGCN PC V+KT+EYCC +  G+CGPT  S+FFK+RCPD YSYP+DD TS FTCP+GT+
Sbjct:   28 FDIVNKCTYTVWAAASPGGGRRLDSGQSWSINVNPGTVQARIWGRTNCNFDGSGRGNCETGDCNGMLECQGYGKAPNTLAEFALNQPN-QDFVDISLVDGFNIPMEFSPTNGGC-RNLRCTAPINEQCPAQLKTQGGCNNPCTVIKTNEYCCTNGPGSCGPTDLSRFFKERCPDAYSYPQDDPTSLFTCPSGTN 219          
BLAST of FC932394 vs. ExPASy Swiss-Prot
Match: TPM1_SOLLC (Osmotin-like protein TPM-1 (Fragment) OS=Solanum lycopersicum GN=TPM-1 PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 8.938e-74
Identity = 120/194 (61.86%), Postives = 145/194 (74.74%), Query Frame = 2
Query:  116 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNR--VIKCTANILGECPNELKVPGGCNGPCPVLKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGT 688
            F++ NNCP TVWAA+ P GGGR+LD+GQTW I A  GTK ARIW RT C FD  G+G C+TGDC G+L+C G+G  PNTLAEYAL QF+++DF D+S +DGFN+PM F+  +PS  +   I CTANI GECP  L+VPGGCN PC      +YCC  G CGPT  S+FFK RCPD YSYP+DD TSTFTCP+G+
Sbjct:   16 FEVRNNCPYTVWAASTPIGGGRRLDRGQTWVINAPRGTKMARIWGRTNCNFDGDGRGSCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCPSGS 209          
BLAST of FC932394 vs. ExPASy Swiss-Prot
Match: OSMO_TOBAC (Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2)

HSP 1 Score: 276.174 bits (705), Expect = 1.167e-73
Identity = 121/193 (62.69%), Postives = 146/193 (75.65%), Query Frame = 2
Query:  119 DITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNR--VIKCTANILGECPNELKVPGGCNGPCPVLKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGT 688
            ++ NNCP TVWAA+ P GGGR+LD+GQTW I A  GTK AR+W RT C F+A+G+G C+TGDC G+L+C G+G  PNTLAEYAL QF+ +DF D+S +DGFN+PM F+  +PS  +   I CTANI GECP EL+VPGGCN PC      +YCC  G CGPT FSKFFK RCPD YSYP+DD TSTFTCP G+
Sbjct:   25 EVRNNCPYTVWAASTPIGGGRRLDRGQTWVINAPRGTKMARVWGRTNCNFNAAGRGTCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSGLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPRELRVPGGCNNPCTTFGGQQYCCTQGPCGPTFFSKFFKQRCPDAYSYPQDDPTSTFTCPGGS 217          
BLAST of FC932394 vs. ExPASy Swiss-Prot
Match: OS81_SOLCO (Osmotin-like protein OSML81 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 3.396e-73
Identity = 121/193 (62.69%), Postives = 145/193 (75.13%), Query Frame = 2
Query:  119 DITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNR--VIKCTANILGECPNELKVPGGCNGPCPVLKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGT 688
            ++ NNCP TVWAA+ P GGGR+L+KGQTW I A  GTK ARIW RT C F+A+G+G C+TGDC G+L+C G+G  PNTLAEYAL QF+++DF D+S +DGFN+PM F+   PS  +   I CTANI GECP  LKVPGGCN PC      +YCC  G CGPT  SKFFK RCPD YSYP+DD TSTFTCP+G+
Sbjct:   25 EVRNNCPYTVWAASTPIGGGRRLNKGQTWVINAPRGTKMARIWGRTGCNFNAAGRGSCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTKPSAGKCHAIHCTANINGECPRALKVPGGCNNPCTTFGGQQYCCTQGPCGPTELSKFFKKRCPDAYSYPQDDPTSTFTCPSGS 217          
BLAST of FC932394 vs. ExPASy Swiss-Prot
Match: OS13_SOLCO (Osmotin-like protein OSML13 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 3.396e-73
Identity = 119/193 (61.66%), Postives = 145/193 (75.13%), Query Frame = 2
Query:  119 DITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNR--VIKCTANILGECPNELKVPGGCNGPCPVLKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGT 688
            ++ NNCP TVWAA+ P GGGR+LD+GQTW I A  GTK ARIW RT C FD +G+G C+TGDC G+L+C G+G  PNTLAEYAL QF+++DF D+S +DGFN+PM F+  +PS  +   I CTANI GECP  L+VPGGCN PC      +YCC  G CGPT  S+FFK RCPD YSYP+DD TSTFTCP+G+
Sbjct:   25 EVRNNCPYTVWAASTPIGGGRRLDRGQTWVINAPRGTKMARIWGRTNCNFDGAGRGSCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCPSGS 217          
BLAST of FC932394 vs. ExPASy Swiss-Prot
Match: PRR2_TOBAC (Pathogenesis-related protein R minor form OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 9.882e-73
Identity = 123/194 (63.40%), Postives = 146/194 (75.26%), Query Frame = 2
Query:  116 FDITNNCPDTVWAAAVPGGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVLKTDEYCCNS--GNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTD 691
            FDI N C  TVWAAA PGGGRQL+ GQ+W+I   PGT  ARIW RT C FD SG+G CETGDCNG+LECQGYG  PNTLAE+AL Q N  DF+D+S +DGFN+PMEFS  +  C R ++CTA I  +CP +LK  GGCN PC V+KT+E+CC +  G+CGPT  S+FFK RCPD YSYP+DD  S FTCP GT+
Sbjct:   28 FDIVNQCTYTVWAAASPGGGRQLNSGQSWSINVNPGTVQARIWGRTNCNFDGSGRGNCETGDCNGMLECQGYGKPPNTLAEFALNQPN-QDFVDISLVDGFNIPMEFSPTNGGC-RNLRCTAPINEQCPAQLKTQGGCNNPCTVIKTNEFCCTNGPGSCGPTDLSRFFKARCPDAYSYPQDDPPSLFTCPPGTN 219          
BLAST of FC932394 vs. ExPASy Swiss-Prot
Match: OSL3_ARATH (Osmotin-like protein OSM34 OS=Arabidopsis thaliana GN=OSM34 PE=2 SV=2)

HSP 1 Score: 271.937 bits (694), Expect = 2.201e-72
Identity = 117/189 (61.90%), Postives = 148/189 (78.31%), Query Frame = 2
Query:  116 FDITNNCPDTVWAAAVPGGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVLKTDEYCCNS--GNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTC 676
            F+I N C  TVWAAA PGGGR+LD GQ+W +    GTK ARIW RT C FD+SG+G+C+TGDC+G L+C G+G  PNTLAEYAL QFN++DF D+S +DGFN+PMEFS  S +C+R++ CTA+I G+CPN L+ PGGCN PC V +T++YCC +  G+C  T +S+FFK RCPD YSYP+DD TSTFTC
Sbjct:   25 FEILNQCSYTVWAAASPGGGRRLDAGQSWRLDVAAGTKMARIWGRTNCNFDSSGRGRCQTGDCSGGLQCTGWGQPPNTLAEYALNQFNNLDFYDISLVDGFNIPMEFSPTSSNCHRIL-CTADINGQCPNVLRAPGGCNNPCTVFQTNQYCCTNGQGSCSDTEYSRFFKQRCPDAYSYPQDDPTSTFTC 212          
BLAST of FC932394 vs. ExPASy Swiss-Prot
Match: NP24_SOLLC (Protein NP24 OS=Solanum lycopersicum PE=1 SV=2)

HSP 1 Score: 270.781 bits (691), Expect = 4.904e-72
Identity = 120/193 (62.18%), Postives = 144/193 (74.61%), Query Frame = 2
Query:  119 DITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNR--VIKCTANILGECPNELKVPGGCNGPCPVLKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGT 688
            ++ NNCP TVWAA+ P GGGR+L++GQTW I A  GTK ARIW RT C F+A+G+G C+TGDC G+L+C G+G  PNTLAEYAL QF+++DF D+S +DGFN+PM F+   PS  +   I CTANI GECP  LKVPGGCN PC      +YCC  G CGPT  SKFFK RCPD YSYP+DD TSTFTCP G+
Sbjct:   25 EVRNNCPYTVWAASTPIGGGRRLNRGQTWVINAPRGTKMARIWGRTGCNFNAAGRGTCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTKPSGGKCHAIHCTANINGECPRALKVPGGCNNPCTTFGGQQYCCTQGPCGPTELSKFFKKRCPDAYSYPQDDPTSTFTCPGGS 217          
The following BLAST results are available for this feature:
BLAST of FC932394 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
TLP_ACTDE5.967e-8671.35Thaumatin-like protein OS=Actinidia deliciosa GN=t... [more]
P21_SOYBN7.812e-7864.95Protein P21 OS=Glycine max PE=1 SV=1[more]
PRR1_TOBAC2.778e-7564.95Pathogenesis-related protein R major form OS=Nicot... [more]
TPM1_SOLLC8.938e-7461.86Osmotin-like protein TPM-1 (Fragment) OS=Solanum l... [more]
OSMO_TOBAC1.167e-7362.69Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2[more]
OS81_SOLCO3.396e-7362.69Osmotin-like protein OSML81 OS=Solanum commersonii... [more]
OS13_SOLCO3.396e-7361.66Osmotin-like protein OSML13 OS=Solanum commersonii... [more]
PRR2_TOBAC9.882e-7363.40Pathogenesis-related protein R minor form OS=Nicot... [more]
OSL3_ARATH2.201e-7261.90Osmotin-like protein OSM34 OS=Arabidopsis thaliana... [more]
NP24_SOLLC4.904e-7262.18Protein NP24 OS=Solanum lycopersicum PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC34208B06EF PostHarveN Citrus clementina cDNA clone C34208B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932394 ID=FC932394; Name=FC932394; organism=Citrus clementina; type=EST; length=692bp
AAACTTATCTATTTTCATATTCATTATCCTCTCCAAAATGAAGTTCGTTA
AAGCTCTTCCCATTTCTTCTGCTCTTCTTATTATCATTTCCATCACCCTG
ACTCATGCTGCCAAATTCGATATCACAAACAATTGCCCCGACACCGTCTG
GGCCGCCGCTGTGCCCGGAGGCGGCAGGCAACTCGACAAGGGTCAAACAT
GGACCATCACCGCCGAGCCAGGCACAAAAGCAGCCCGCATTTGGGCTCGA
ACCAAATGCCAGTTTGATGCTTCCGGCAAAGGCAAATGCGAGACCGGTGA
CTGTAACGGACTCCTCGAGTGCCAAGGCTACGGTGCAGCACCTAACACCT
TGGCCGAGTACGCGTTGAAGCAATTCAACGACATGGATTTCATTGACATG
TCCAACATTGACGGATTCAATGTTCCCATGGAATTTAGCTCTGTCTCTCC
CTCATGCAACCGCGTGATCAAGTGCACTGCTAACATTCTTGGCGAGTGCC
CGAATGAATTGAAGGTTCCTGGAGGATGTAACGGGCCGTGCCCCGTGCTC
AAGACCGACGAGTACTGTTGCAATTCAGGCAACTGCGGACCTACAGGTTT
CTCCAAGTTTTTCAAGGATAGGTGCCCGGATGTTTACAGTTACCCTAAGG
ATGACGCTACCAGCACATTTACTTGCCCGACTGGGACAGACT
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