FC932395
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932395 vs. ExPASy Swiss-Prot
Match: RL17_ASPFU (60S ribosomal protein L17 OS=Aspergillus fumigatus GN=rpl17 PE=3 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 1.267e-76 Identity = 148/185 (80.00%), Postives = 158/185 (85.41%), Query Frame = 3 Query: 75 RYAAQEISEAKSARARGSYLRVSFKNTRETAQAVNGMKLSKALAFLENVTNKTMAVPMRRYAGSTGRTAQGKQFGVSKARWPVKSAEHIIDLLKNAEANADGKGLDTSALIIKRIQVNQAPKGRRRTYRAHGRTNPYMTNPCHIELILTEAAEEVKKAS---TDKQVRLSSRQRGTQIRRALIEA 620 RYAAQ+I AKSARARGSYLRVSFKNTRETAQA+NGMKL +ALAFLENV NKT VP RRYAGS GRTAQGKQ+GVSKARWPVKSA+ ++DLLKNAEANAD KGLDT LI+K IQVNQAPKGRRRTYRAHGR NPYMTNPCHIELILTE E V+KA + LSSRQRG QIRRALIEA Sbjct: 10 RYAAQDIPAAKSARARGSYLRVSFKNTRETAQAINGMKLQRALAFLENVKNKTEVVPFRRYAGSIGRTAQGKQWGVSKARWPVKSAQFLLDLLKNAEANADTKGLDTGNLIVKHIQVNQAPKGRRRTYRAHGRINPYMTNPCHIELILTEGEETVQKAPQVVKKEGAHLSSRQRGAQIRRALIEA 194
BLAST of FC932395 vs. ExPASy Swiss-Prot
Match: RL17_NEUCR (60S ribosomal protein L17 OS=Neurospora crassa GN=rpl-17 PE=3 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 1.039e-70 Identity = 136/186 (73.12%), Postives = 152/186 (81.72%), Query Frame = 3 Query: 69 MARYAAQEISEAKSARARGSYLRVSFKNTRETAQAVNGMKLSKALAFLENVTNKTMAVPMRRYAGSTGRTAQGKQFGVSKARWPVKSAEHIIDLLKNAEANADGKGLDTSALIIKRIQVNQAPKGRRRTYRAHGRTNPYMTNPCHIELILTEAAEEVKK--ASTDKQVRLSSRQRGTQIRRALIEA 620 M RYAA EI+ AKSAR+RGSYLRVSFKNTRETAQA+NG KL +A FLENV K AVPMRRYAG TGR AQGKQFGVS+ARWP KSAE ++ LLKNAEANAD KGLDT L++K IQVNQAPK RRRTYRAHGR NPYM+NPCHIELILTEA E V+K A ++ LSSRQRG ++RRA+ A Sbjct: 1 MVRYAATEIAPAKSARSRGSYLRVSFKNTRETAQAINGWKLQRAQKFLENVLEKKEAVPMRRYAGGTGRAAQGKQFGVSRARWPAKSAEFLLGLLKNAEANADAKGLDTGNLVVKHIQVNQAPKQRRRTYRAHGRINPYMSNPCHIELILTEADEVVQKSEAVVREEAHLSSRQRGARVRRAITAA 186
BLAST of FC932395 vs. ExPASy Swiss-Prot
Match: RL17_DEBHA (60S ribosomal protein L17 OS=Debaryomyces hansenii GN=RPL17 PE=3 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 5.007e-57 Identity = 110/174 (63.22%), Postives = 131/174 (75.29%), Query Frame = 3 Query: 69 MARYAAQEISEAKSARARGSYLRVSFKNTRETAQAVNGMKLSKALAFLENVTNKTMAVPMRRYAGSTGRTAQGKQFGVSKARWPVKSAEHIIDLLKNAEANADGKGLDTSALIIKRIQVNQAPKGRRRTYRAHGRTNPYMTNPCHIELILTEAAEEVKKASTDKQVRLSSRQRG 590 M RYAA + AKSA ARGSYLRVS+KNTRETAQA++G KL +A +L+ V + A+P RR+ S GRT QGK+FGV+KARWP KS I DLL+N +ANA+ KGLD S L + IQVNQAPK RRRTYRAHGR N Y ++PCHIELILTE E V+KA K+VRL+ RQRG Sbjct: 1 MVRYAATSANPAKSASARGSYLRVSYKNTRETAQAISGWKLERAQKYLDQVLDHQRAIPFRRFNSSIGRTGQGKEFGVTKARWPAKSVNFIKDLLRNGQANAESKGLDASKLKVSHIQVNQAPKQRRRTYRAHGRINAYQSSPCHIELILTEENEAVEKADDSKKVRLNVRQRG 174
BLAST of FC932395 vs. ExPASy Swiss-Prot
Match: RL17A_YEAST (60S ribosomal protein L17-A OS=Saccharomyces cerevisiae GN=RPL17A PE=1 SV=4) HSP 1 Score: 218.394 bits (555), Expect = 3.245e-56 Identity = 110/174 (63.22%), Postives = 132/174 (75.86%), Query Frame = 3 Query: 69 MARYAAQEISEAKSARARGSYLRVSFKNTRETAQAVNGMKLSKALAFLENVTNKTMAVPMRRYAGSTGRTAQGKQFGVSKARWPVKSAEHIIDLLKNAEANADGKGLDTSALIIKRIQVNQAPKGRRRTYRAHGRTNPYMTNPCHIELILTEAAEEVKKASTDKQVRLSSRQRG 590 MARY A + AKSA ARGSYLRVSFKNTRETAQA+NG +L+KA +LE V + A+P RR+ S GRTAQGK+FGV+KARWP KS + + LL+NA ANA+ KGLD + L + IQVNQAPK RRRTYRAHGR N Y ++P HIEL++TE E V KA+ K VRL+SRQRG Sbjct: 1 MARYGATSTNPAKSASARGSYLRVSFKNTRETAQAINGWELTKAQKYLEQVLDHQRAIPFRRFNSSIGRTAQGKEFGVTKARWPAKSVKFVQGLLQNAAANAEAKGLDATKLYVSHIQVNQAPKQRRRTYRAHGRINKYESSPSHIELVVTEKEEAVAKAAEKKVVRLTSRQRG 174
BLAST of FC932395 vs. ExPASy Swiss-Prot
Match: RL17B_YEAST (60S ribosomal protein L17-B OS=Saccharomyces cerevisiae GN=RPL17B PE=1 SV=2) HSP 1 Score: 217.238 bits (552), Expect = 7.230e-56 Identity = 109/174 (62.64%), Postives = 132/174 (75.86%), Query Frame = 3 Query: 69 MARYAAQEISEAKSARARGSYLRVSFKNTRETAQAVNGMKLSKALAFLENVTNKTMAVPMRRYAGSTGRTAQGKQFGVSKARWPVKSAEHIIDLLKNAEANADGKGLDTSALIIKRIQVNQAPKGRRRTYRAHGRTNPYMTNPCHIELILTEAAEEVKKASTDKQVRLSSRQRG 590 MARY A + AKSA ARGSYLRVSFKNTRETAQA+NG +L+KA +L+ V + A+P RR+ S GRTAQGK+FGV+KARWP KS + + LL+NA ANA+ KGLD + L + IQVNQAPK RRRTYRAHGR N Y ++P HIEL++TE E V KA+ K VRL+SRQRG Sbjct: 1 MARYGATSTNPAKSASARGSYLRVSFKNTRETAQAINGWELTKAQKYLDQVLDHQRAIPFRRFNSSIGRTAQGKEFGVTKARWPAKSVKFVQGLLQNAAANAEAKGLDATKLYVSHIQVNQAPKQRRRTYRAHGRINKYESSPSHIELVVTEKEEAVAKAAEKKVVRLTSRQRG 174
BLAST of FC932395 vs. ExPASy Swiss-Prot
Match: RL17_YARLI (60S ribosomal protein L17 OS=Yarrowia lipolytica GN=RPL17 PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.747e-55 Identity = 105/174 (60.34%), Postives = 129/174 (74.14%), Query Frame = 3 Query: 69 MARYAAQEISEAKSARARGSYLRVSFKNTRETAQAVNGMKLSKALAFLENVTNKTMAVPMRRYAGSTGRTAQGKQFGVSKARWPVKSAEHIIDLLKNAEANADGKGLDTSALIIKRIQVNQAPKGRRRTYRAHGRTNPYMTNPCHIELILTEAAEEVKKASTDKQVRLSSRQRG 590 M RY+ Q + K+A ARG+YLR SFKNT E A A+ G L KALA+L+ VT+ A+P R++AGS GRT QGK+FGV+KARWPVKS + + DLL+NA+ANA+ KGLD L+I IQVNQAPK RRRTYRAHGR N Y ++P HIELIL+E AEE+ KA +SSRQRG Sbjct: 1 MTRYSVQSVDPTKTASARGAYLRTSFKNTYEVAGAIRGWNLQKALAYLDQVTDHKRAIPFRKHAGSIGRTGQGKEFGVTKARWPVKSIKFVQDLLQNAQANAETKGLDKETLVISHIQVNQAPKQRRRTYRAHGRINAYQSSPSHIELILSEPAEEIAKAKETSLAHISSRQRG 174
BLAST of FC932395 vs. ExPASy Swiss-Prot
Match: RL17A_SCHPO (60S ribosomal protein L17-A OS=Schizosaccharomyces pombe GN=rpl17a PE=2 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 7.002e-51 Identity = 105/188 (55.85%), Postives = 128/188 (68.09%), Query Frame = 3 Query: 69 MARYAAQEISEAKSARARGSYLRVSFKNTRETAQAVNGMKLSKALAFLENVTNKTMAVPMRRYAGSTGRTAQGKQFGVSKARWPVKSAEHIIDLLKNAEANADGKGLDTSALIIKRIQVNQAPKGRRRTYRAHGRTNPYMTNPCHIELILTEAAEEVKKASTDKQVRLSSRQ----RGTQIRRALIEA 620 M RY+A E K A+ARG+YLR FKN+RE A +NGM L KA FL+NV AVP RR+ G GRTAQGK+FGV++ARWPVKS + DLLKNAEANA+ KGLD LIIK +QVN APK RRRTYRAHGR Y+++P HIE+I+ E E V KA+ D R+S +Q R R+A+ A Sbjct: 1 MVRYSASPALETKCAKARGAYLRTHFKNSREVAFTINGMSLKKAFIFLDNVKEHKQAVPFRRFNGGVGRTAQGKEFGVTQARWPVKSVKFFYDLLKNAEANAEAKGLDMDKLIIKHVQVNAAPKQRRRTYRAHGRVTAYLSSPSHIEIIVAEEEEAVPKAN-DTVSRVSLKQGAKARNLAARKAITAA 187
BLAST of FC932395 vs. ExPASy Swiss-Prot
Match: RL17B_SCHPO (60S ribosomal protein L17-B OS=Schizosaccharomyces pombe GN=rpl17b PE=2 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 9.145e-51 Identity = 105/188 (55.85%), Postives = 127/188 (67.55%), Query Frame = 3 Query: 69 MARYAAQEISEAKSARARGSYLRVSFKNTRETAQAVNGMKLSKALAFLENVTNKTMAVPMRRYAGSTGRTAQGKQFGVSKARWPVKSAEHIIDLLKNAEANADGKGLDTSALIIKRIQVNQAPKGRRRTYRAHGRTNPYMTNPCHIELILTEAAEEVKKASTDKQVRLSSRQ----RGTQIRRALIEA 620 M RY+A E K A+ARG+YLR FKN+RE A +NGM L KA FL+NV AVP RR+ G GRTAQGK+FGV++ARWPVKS DLLKNAEANA+ KGLD LIIK +QVN APK RRRTYRAHGR Y+++P HIE+I+ E E V KA+ D R+S +Q R R+A+ A Sbjct: 1 MVRYSAAPALETKCAKARGAYLRTHFKNSREVAFTINGMNLKKAFIFLDNVKEHKQAVPFRRFNGGVGRTAQGKEFGVTQARWPVKSVNFFYDLLKNAEANAEAKGLDMDKLIIKHVQVNAAPKQRRRTYRAHGRVTAYLSSPSHIEIIVAEEEEAVPKAN-DTVSRVSLKQGAKARNLAARKAITSA 187
BLAST of FC932395 vs. ExPASy Swiss-Prot
Match: RL17_RAT (60S ribosomal protein L17 OS=Rattus norvegicus GN=Rpl17 PE=2 SV=3) HSP 1 Score: 192.971 bits (489), Expect = 1.460e-48 Identity = 94/159 (59.12%), Postives = 119/159 (74.84%), Query Frame = 3 Query: 69 MARYAAQEISEAKSARARGSYLRVSFKNTRETAQAVNGMKLSKALAFLENVTNKTMAVPMRRYAGSTGRTAQGKQFGVSKARWPVKSAEHIIDLLKNAEANADGKGLDTSALIIKRIQVNQAPKGRRRTYRAHGRTNPYMTNPCHIELILTEAAEEVKK 545 M RY+ + KS ++RGS LRV FKNTRETAQA+ GM + KA +L++VT K VP RRY G GR AQ KQ+G ++ RWP KSAE ++ +LKNAE+NA+ KGLD +L+I+ IQVN+APK RRRTYRAHGR NPYM++PCHIE+ILTE + V K Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
BLAST of FC932395 vs. ExPASy Swiss-Prot
Match: RL17_MOUSE (60S ribosomal protein L17 OS=Mus musculus GN=Rpl17 PE=2 SV=3) HSP 1 Score: 192.971 bits (489), Expect = 1.460e-48 Identity = 94/159 (59.12%), Postives = 119/159 (74.84%), Query Frame = 3 Query: 69 MARYAAQEISEAKSARARGSYLRVSFKNTRETAQAVNGMKLSKALAFLENVTNKTMAVPMRRYAGSTGRTAQGKQFGVSKARWPVKSAEHIIDLLKNAEANADGKGLDTSALIIKRIQVNQAPKGRRRTYRAHGRTNPYMTNPCHIELILTEAAEEVKK 545 M RY+ + KS ++RGS LRV FKNTRETAQA+ GM + KA +L++VT K VP RRY G GR AQ KQ+G ++ RWP KSAE ++ +LKNAE+NA+ KGLD +L+I+ IQVN+APK RRRTYRAHGR NPYM++PCHIE+ILTE + V K Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 159 The following BLAST results are available for this feature:
BLAST of FC932395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 88
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932395 ID=FC932395; Name=FC932395; organism=Citrus clementina; type=EST; length=741bpback to top |