FC932399

Overview
NameFC932399
Unique NameFC932399
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932399 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 9.499e-50
Identity = 106/205 (51.71%), Postives = 142/205 (69.27%), Query Frame = 3
Query:  111 MSSFHDQLMKPP--NDEEDFMLIMELAHSSLLPMTMKAIIELGVLEILAKASPSQ-LSSSEIASQLPTNNQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVCGVYGLASVCRYLLPNEDGVSLAPIFLLAREKVSVDPWYHLKDCLLEGTLPFMKAHNTKNPFEYAMKDARRRNLFNQSMSNHTALVMKKILEIYKGFEEINQL 716
            M S  +  M P   +DEE  +  M+LA +S+LPM +KA IEL +LEI+AKA P   LS ++IASQLPT N +A  +LDRMLRLLASYS LTY+L T  DG V  +YGL  VC++L  NE+GVS+AP+ L+ ++KV ++ WYHLKD +LEG +PF KA+     FEY   D R   +FN+ M++H+ + MKKILE YKGFE +  +
Sbjct:    1 MGSTGETQMTPTQVSDEEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGVFLSPTDIASQLPTKNPDAPVMLDRMLRLLASYSILTYSLRTLADGKVERLYGLGPVCKFLTKNEEGVSIAPLCLMNQDKVLLESWYHLKDAVLEGGIPFNKAYG-MTAFEYHGTDPRFNKVFNRGMADHSTITMKKILETYKGFEGLTSV 204          
BLAST of FC932399 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.764e-49
Identity = 105/205 (51.22%), Postives = 141/205 (68.78%), Query Frame = 3
Query:  111 MSSFHDQLMKPP--NDEEDFMLIMELAHSSLLPMTMKAIIELGVLEILAKASPSQ-LSSSEIASQLPTNNQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVCGVYGLASVCRYLLPNEDGVSLAPIFLLAREKVSVDPWYHLKDCLLEGTLPFMKAHNTKNPFEYAMKDARRRNLFNQSMSNHTALVMKKILEIYKGFEEINQL 716
            M S  +  M P   +DEE  +  M+LA +S+LPM +KA IEL +LEI+AKA P   LS +++ASQLPT N EA  +LDRMLRLLASYS LTY+L T  DG V  +YGL  VC++L  NEDGVS+A + L+ ++KV V+ WYHLKD +L+G +PF KA+     F+Y   D R   +FN+ M++H+ + MKKILE YKGFE +  +
Sbjct:    1 MGSTGETQMTPTQVSDEEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPNDLASQLPTKNPEAPVMLDRMLRLLASYSILTYSLRTLPDGKVERLYGLGPVCKFLTKNEDGVSIAALCLMNQDKVLVESWYHLKDAVLDGGIPFNKAYG-MTAFDYHGTDPRFNKVFNKGMADHSTITMKKILETYKGFEGLTSI 204          
BLAST of FC932399 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.340e-48
Identity = 105/205 (51.22%), Postives = 140/205 (68.29%), Query Frame = 3
Query:  111 MSSFHDQLMKPP--NDEEDFMLIMELAHSSLLPMTMKAIIELGVLEILAKASPSQ-LSSSEIASQLPTNNQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVCGVYGLASVCRYLLPNEDGVSLAPIFLLAREKVSVDPWYHLKDCLLEGTLPFMKAHNTKNPFEYAMKDARRRNLFNQSMSNHTALVMKKILEIYKGFEEINQL 716
            M S  +  M P   +DEE  +  M+LA +S+LPM +K  IEL +LEI+AKA P   LS+SEIAS LPT N +A  +LDR+LRLLASYS LT +L    DG V  +YGLA VC++L  NEDGVS++P+ L+ ++KV ++ WY+LKD +LEG +PF KA+     FEY   D R   +FN+ MS+H+ + MKKILE YKGFE +  L
Sbjct:    1 MGSTGETQMTPTQVSDEEAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPDAPVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILEGGIPFNKAYG-MTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSL 204          
BLAST of FC932399 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.212e-48
Identity = 104/205 (50.73%), Postives = 140/205 (68.29%), Query Frame = 3
Query:  111 MSSFHDQLMKPP--NDEEDFMLIMELAHSSLLPMTMKAIIELGVLEILAKASPSQ-LSSSEIASQLPTNNQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVCGVYGLASVCRYLLPNEDGVSLAPIFLLAREKVSVDPWYHLKDCLLEGTLPFMKAHNTKNPFEYAMKDARRRNLFNQSMSNHTALVMKKILEIYKGFEEINQL 716
            M S  +  M P   +DEE  +  M+LA +S+LPM +K  IEL +LEI+AKA P   LS+SEIAS LPT N +A  +LDR+LRLLASYS LT +L    DG V  +YGLA VC++L  NEDGVS++P+ L+ ++KV ++ WY+LKD +L+G +PF KA+     FEY   D R   +FN+ MS+H+ + MKKILE YKGFE +  L
Sbjct:    1 MGSTGETQMTPTQVSDEEAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPDAPVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYG-MTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSL 204          
BLAST of FC932399 vs. ExPASy Swiss-Prot
Match: IEMT_CLABR ((Iso)eugenol O-methyltransferase OS=Clarkia breweri GN=IEMT1 PE=1 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 2.587e-47
Identity = 99/192 (51.56%), Postives = 135/192 (70.31%), Query Frame = 3
Query:  147 NDEEDFMLIMELAHSSLLPMTMKAIIELGVLEILAKASPSQ--LSSSEIASQLPTNNQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVCGVYGLASVCRYLLPNEDGVSLAPIFLLAREKVSVDPWYHLKDCLLEGTLPFMKAHNTKNPFEYAMKDARRRNLFNQSMSNHTALVMKKILEIYKGFEEINQL 716
            +DEE  +  M+LA +++LPM +KA IEL VLEI+AK+ P    +S +EIA+QLPT N EA  +LDR+LRLLASYS +TY L     G V  +YGLA VC++L  NEDGVSLAP  L A +KV ++PW++LKD +LEG +PF KA+   N F+Y   D R   +FN+ MS+++ + MKKILE+Y GFE +  +
Sbjct:   17 SDEEANLFAMQLASAAVLPMALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTTNPEAPVMLDRVLRLLASYSVVTYTLRELPSGKVERLYGLAPVCKFLTKNEDGVSLAPFLLTATDKVLLEPWFYLKDAILEGGIPFNKAYG-MNEFDYHGTDHRFNKVFNKGMSSNSTITMKKILEMYNGFEGLTTI 207          
BLAST of FC932399 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 7.526e-47
Identity = 96/185 (51.89%), Postives = 132/185 (71.35%), Query Frame = 3
Query:  150 DEEDFMLIMELAHSSLLPMTMKAIIELGVLEILAKASP-SQLSSSEIASQLPTNNQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVCGVYGLASVCRYLLPNEDGVSLAPIFLLAREKVSVDPWYHLKDCLLEGTLPFMKAHNTKNPFEYAMKDARRRNLFNQSMSNHTALVMKKILEIYKGFE 701
            +EE  +  M LA +S+LPM +K+ IEL +LE++AKA P + +S SE+A+QLPT+N EA  +LDR+LRLLA+YS L   L    DG V  +YGLA VC++L  N DGVS+AP+ L+ ++KV ++ WYHLKD +L+G +PF KA+     FEY   D R   +FNQ MSNH+ + MKKILE+Y+GFE
Sbjct:    3 EEEACLFAMSLASASVLPMVLKSAIELDLLELIAKAGPGAYVSPSELAAQLPTHNPEAPIMLDRILRLLATYSVLDCKLNNLADGGVERLYGLAPVCKFLTKNADGVSMAPLLLMNQDKVLMESWYHLKDAVLDGGIPFNKAYG-MTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILEVYRGFE 186          
BLAST of FC932399 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 7.526e-47
Identity = 98/194 (50.52%), Postives = 137/194 (70.62%), Query Frame = 3
Query:  147 NDEEDFMLIMELAHSSLLPMTMKAIIELGVLEILAKASP----SQLSSSEIASQLPTNNQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVCGVYGLASVCRYLLPNEDGVSLAPIFLLAREKVSVDPWYHLKDCLLEGTLPFMKAHNTKNPFEYAMKDARRRNLFNQSMSNHTALVMKKILEIYKGFEEINQL 716
            +DEE  +  M+LA +S+LPM +KA IEL VLEI+AK+ P    + +S +EIA+QLPT N +A  +LDR+LRLLASYS +T +L    DG V  +YGLA VC++L  NEDGVSLAP+ L+ ++KV ++ WY+LKD +L+G +PF KA+     FEY   D R   +FN+ MS+H+ + MKKI E+Y GFE +N +
Sbjct:   17 SDEEANLFAMQLASASVLPMVLKAAIELDVLEIMAKSIPHGSGAYISPAEIAAQLPTTNPDAPVMLDRVLRLLASYSVVTCSLRELPDGKVERLYGLAPVCKFLTKNEDGVSLAPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYG-MTAFEYHGTDPRFNKVFNRGMSDHSTITMKKIFEMYTGFEALNTI 209          
BLAST of FC932399 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 9.830e-47
Identity = 97/191 (50.79%), Postives = 136/191 (71.20%), Query Frame = 3
Query:  147 NDEEDFMLIMELAHSSLLPMTMKAIIELGVLEILAKASP-SQLSSSEIASQLPTNNQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVCGVYGLASVCRYLLPNEDGVSLAPIFLLAREKVSVDPWYHLKDCLLEGTLPFMKAHNTKNPFEYAMKDARRRNLFNQSMSNHTALVMKKILEIYKGFEEINQL 716
            +DEE  +  M+LA +S+LPM +K+ +EL +LEI+AKA P +Q+S  EIASQLPT N +A  +LDRMLRLLA Y  LT ++ T +DG V  +YGLA+V +YL+ NEDGVS++ + L+ ++KV ++ WYHLKD +L+G +PF KA+     FEY   D R   +FN+ MS+H+ + MKKILE Y GFE +  L
Sbjct:   15 SDEEANLFAMQLASASVLPMILKSALELDLLEIIAKAGPGAQISPIEIASQLPTTNPDAPVMLDRMLRLLACYIILTCSVRTQQDGKVQRLYGLATVAKYLVKNEDGVSISALNLMNQDKVLMESWYHLKDAVLDGGIPFNKAYG-MTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEGLKSL 204          
BLAST of FC932399 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGU (Caffeic acid 3-O-methyltransferase OS=Eucalyptus gunnii GN=OMT PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 9.830e-47
Identity = 98/186 (52.69%), Postives = 131/186 (70.43%), Query Frame = 3
Query:  147 NDEEDFMLIMELAHSSLLPMTMKAIIELGVLEILAKASPSQ-LSSSEIASQLPTNNQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVCGVYGLASVCRYLLPNEDGVSLAPIFLLAREKVSVDPWYHLKDCLLEGTLPFMKAHNTKNPFEYAMKDARRRNLFNQSMSNHTALVMKKILEIYKGFE 701
            +DEE  +  M+LA +S+LPM +KA IEL +LEI+AKA P   LS  E+A+QLPT N EA  +LDR+ RLLASYS LT  L    DG V  +YGLA VC++L+ NEDGVS+A + L+ ++K+ ++ WY+LKD +LEG +PF KA+     FEY   D R   +FN+ MS+H+ + MKKILE YKGFE
Sbjct:   16 SDEEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPGEVAAQLPTQNPEAPVMLDRIFRLLASYSVLTCTLRNLPDGKVERLYGLAPVCKFLVKNEDGVSIAALNLMNQDKILMESWYYLKDAVLEGGIPFNKAYG-MTAFEYHGTDPRFNKIFNRGMSDHSTITMKKILETYKGFE 200          
BLAST of FC932399 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 2.190e-46
Identity = 96/190 (50.53%), Postives = 133/190 (70.00%), Query Frame = 3
Query:  150 DEEDFMLIMELAHSSLLPMTMKAIIELGVLEILAKASP-SQLSSSEIASQLPTNNQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVCGVYGLASVCRYLLPNEDGVSLAPIFLLAREKVSVDPWYHLKDCLLEGTLPFMKAHNTKNPFEYAMKDARRRNLFNQSMSNHTALVMKKILEIYKGFEEINQL 716
            ++E F+  M+LA +S+LPM +K+ +EL +LEI+AKA P + +S SE+A+QLPT N EA  +LDRMLRLLA+YS L   L T  DG V  +Y LA VC+ L  N DGVS+AP+ L+ ++KV ++ WYHL D +L+G +PF KA+     FEY   D R   +FN+ MS+H+ + MKKILE YKGFE +N +
Sbjct:   12 EDEAFLFAMQLASASVLPMVLKSALELDLLEIMAKAGPGAAISPSELAAQLPTKNPEAPVMLDRMLRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKLLTKNADGVSVAPLLLMNQDKVLMESWYHLTDAVLDGGVPFNKAYG-MTAFEYHGTDPRFNKVFNRGMSDHSTMTMKKILEDYKGFEGLNSI 200          
The following BLAST results are available for this feature:
BLAST of FC932399 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
COMT1_PRUDU9.499e-5051.71Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_ROSCH2.764e-4951.22Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
COMT1_POPKI2.340e-4851.22Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT1_POPTM5.212e-4850.73Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
IEMT_CLABR2.587e-4751.56(Iso)eugenol O-methyltransferase OS=Clarkia brewer... [more]
COMT1_COFCA7.526e-4751.89Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT1_CLABR7.526e-4750.52Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
COMT1_MEDSA9.830e-4750.79Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_EUCGU9.830e-4752.69Caffeic acid 3-O-methyltransferase OS=Eucalyptus g... [more]
COMT1_CAPAN2.190e-4650.53Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]

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Properties
Property NameValue
Genbank descriptionC34208B11EF PostHarveN Citrus clementina cDNA clone C34208B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932399 ID=FC932399; Name=FC932399; organism=Citrus clementina; type=EST; length=717bp
GGATAACTAATATATCTATACGTGTATCTATATAGTTATATACTGAGCGC
TCATCAACATCATCCATTGCCATTTTGTTAATTTCAGCATATCCTACTCC
GAGAATTAAGATGAGTTCATTCCATGACCAACTCATGAAACCACCAAACG
ATGAGGAAGATTTCATGCTGATCATGGAGCTTGCCCACAGCTCATTACTT
CCGATGACCATGAAAGCTATCATCGAGCTTGGCGTGTTAGAGATTTTAGC
TAAAGCTAGTCCATCTCAGCTTTCTTCTTCTGAGATTGCATCTCAGCTGC
CCACAAATAACCAAGAAGCCTCAACAGTGCTTGATCGAATGTTACGACTC
CTTGCTAGTTACTCTTTCCTAACATATAATCTTGTCACAAATAAAGATGG
AAATGTTTGCGGAGTATATGGTTTAGCGTCCGTTTGCAGATATTTGCTTC
CAAATGAAGACGGAGTTTCTCTTGCTCCCATTTTCCTCTTAGCTCGGGAG
AAAGTTTCTGTAGATCCTTGGTACCACTTGAAAGATTGTTTATTGGAAGG
GACCCTACCTTTTATGAAGGCACATAATACAAAAAATCCATTTGAGTATG
CTATGAAAGATGCTAGAAGACGGAACCTCTTCAATCAATCAATGAGCAAT
CATACGGCTTTAGTTATGAAGAAAATTCTTGAAATCTACAAAGGATTTGA
AGAGATAAACCAATTGG
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