FC932403
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932403 vs. ExPASy Swiss-Prot
Match: RAP23_ARATH (Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana GN=RAP2-3 PE=1 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 5.673e-31 Identity = 87/208 (41.83%), Postives = 105/208 (50.48%), Query Frame = 1 Query: 94 MCGGALIADYDEVRPVRRERKLTSEDLWSEF--GSISDLLGLDYNGKSHPKQPLKVKNEKAEDSSNKAARVEGKEKKTQRVRKNLYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNXXXXXXXXXXXXXKRIRGDKAKLNF--------------XXXXXXXXXXXXKKRCMPS---PELTQPRFETVGTPPAPAPSPWVGFGYQNEF 660 MCGGA+I+DY + + RKLT+E+LWSE + D G K HP + VK E + + A GK +K RKN+YRGIR+RPWGKWAAEIRDP KGVRVWLGTFN K+IRGDKAKLNF KK C+ S EL+QP F P +GFG +EF Sbjct: 1 MCGGAIISDYAPLVTKAKGRKLTAEELWSELDASAADDFWGFYSTSKLHPTNQVNVKEEAVK---KEQATEPGKRRK----RKNVYRGIRKRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAMAYDVAAKQIRGDKAKLNFPDLHHPPPPNYTPPPSSPRSTDQPPAKKVCVVSQSESELSQPSF----------PVECIGFGNGDEF 191
BLAST of FC932403 vs. ExPASy Swiss-Prot
Match: ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana GN=ERF071 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.004e-19 Identity = 61/139 (43.88%), Postives = 73/139 (52.52%), Query Frame = 1 Query: 94 MCGGALIADYDEVRPVRRERKLTSEDLWSEFGSISDLLGLDYNGKSHPKQPLKVKNEKAEDSSNKAARVEGKEKKTQRVRKNLYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNXXXXXXXXXXXXXKRIRGDKAKLNF 510 MCGGA+I+D+ +WS+ S LG + K ++P+ V E+ +GK R RKNLYRGIRQRPWGKWAAEIRDP KGVRVWLGTF +IRG KAKLNF Sbjct: 1 MCGGAIISDF----------------IWSKSESEPSQLGSVSSRKK--RKPVSVSEER-----------DGK-----RERKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNF 105
BLAST of FC932403 vs. ExPASy Swiss-Prot
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.981e-19 Identity = 65/183 (35.52%), Postives = 79/183 (43.17%), Query Frame = 1 Query: 94 MCGGALIADYDEVRPVRRERKLTSEDLW-----------------SEFGSISDLLGLDYNGKSHPKQ------------------------PLKVKNEKAEDS--SNKAARVEGK-EKKTQRVRKNLYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNXXXXXXXXXXXXXKRIRGDKAKLNF 510 MCGGA+I+D+ P R R++TSE +W S F D+ G P + AE S K ++G EK R RKN YRGIRQRPWGKWAAEIRDP +G R+WLGTF +RIRG KAK+NF Sbjct: 1 MCGGAIISDFI---PPPRSRRVTSEFIWPDLKKNLKGSKKSSKNRSNFFDFDAEFEADFQGFKDDSSIDCDDDFDVGDVFADVKPFVFTSTPKPAVSAAAEGSVFGKKVTGLDGDAEKSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNF 180
BLAST of FC932403 vs. ExPASy Swiss-Prot
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.217e-18 Identity = 43/66 (65.15%), Postives = 47/66 (71.21%), Query Frame = 1 Query: 313 KKTQRVRKNLYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNXXXXXXXXXXXXXKRIRGDKAKLNF 510 K +R RKN +RGIRQRPWGKWAAEIRDP KGVRVWLGTFN +RIRG KAK+NF Sbjct: 110 KSAKRKRKNQFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSAEEAARAYDAEARRIRGKKAKVNF 175
BLAST of FC932403 vs. ExPASy Swiss-Prot
Match: RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana GN=RAP2-2 PE=2 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.602e-17 Identity = 43/70 (61.43%), Postives = 48/70 (68.57%), Query Frame = 1 Query: 301 EGKEKKTQRVRKNLYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNXXXXXXXXXXXXXKRIRGDKAKLNF 510 E EK ++R RKN YRGIRQRPWGKWAAEIRDP KG R WLGTF+ +RIRG KAK+NF Sbjct: 114 EQAEKSSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNF 183
BLAST of FC932403 vs. ExPASy Swiss-Prot
Match: ERF73_ARATH (Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana GN=ERF073 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.357e-16 Identity = 42/70 (60.00%), Postives = 49/70 (70.00%), Query Frame = 1 Query: 301 EGKEKKTQRVRKNLYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNXXXXXXXXXXXXXKRIRGDKAKLNF 510 +GK+K++ R Y+GIR+RPWG+WAAEIRDP KGVRVWLGTFN KRIRG KAKLNF Sbjct: 16 DGKKKQSSR-----YKGIRRRPWGRWAAEIRDPIKGVRVWLGTFNTAEEAARAYDLEAKRIRGAKAKLNF 80
BLAST of FC932403 vs. ExPASy Swiss-Prot
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 5.155e-16 Identity = 42/80 (52.50%), Postives = 51/80 (63.75%), Query Frame = 1 Query: 271 EDSSNKAARVEGKEKKTQRVRKNLYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNXXXXXXXXXXXXXKRIRGDKAKLNF 510 E+S +KA E +EKK + YRG+RQRPWGKWAAEIRDP++ RVWLGTF+ R RG+KAKLNF Sbjct: 59 EESMSKAFPEEAREKKRR------YRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNF 132
BLAST of FC932403 vs. ExPASy Swiss-Prot
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF112 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.341e-15 Identity = 47/106 (44.34%), Postives = 54/106 (50.94%), Query Frame = 1 Query: 307 KEKKTQRVRKNLYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNXXXXXXXXXXXXXKRIRGDKAKLNFXXXXXXXXXXXXKKRCMPSPELTQPRFETVGTPPAPAP 624 +EK R R YRG+RQRPWGKWAAEIRDP K RVWLGTF+ RG KAKLNF + PSP + R + TPP+P P Sbjct: 60 QEKSNSRQRN--YRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNF-----PEHIRVNPTQLYPSPATSHDRI--IVTPPSPPP 156
BLAST of FC932403 vs. ExPASy Swiss-Prot
Match: ABR1_ARATH (Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana GN=ABR1 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.829e-14 Identity = 35/56 (62.50%), Postives = 39/56 (69.64%), Query Frame = 1 Query: 343 YRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNXXXXXXXXXXXXXKRIRGDKAKLNF 510 YRG+RQRPWGKWAAEIRDP+K RVWLGTF+ R RG+KAKLNF Sbjct: 185 YRGVRQRPWGKWAAEIRDPFKAARVWLGTFDNAESAARAYDEAALRFRGNKAKLNF 240
BLAST of FC932403 vs. ExPASy Swiss-Prot
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 3.694e-14 Identity = 36/60 (60.00%), Postives = 38/60 (63.33%), Query Frame = 1 Query: 331 RKNLYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNXXXXXXXXXXXXXKRIRGDKAKLNF 510 R YRG+RQRPWGKWAAEIRDP+K RVWLGTF R RG KAKLNF Sbjct: 57 RPKKYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNF 116 The following BLAST results are available for this feature:
BLAST of FC932403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932403 ID=FC932403; Name=FC932403; organism=Citrus clementina; type=EST; length=702bpback to top |