FC932409
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932409 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 8.029e-29 Identity = 59/107 (55.14%), Postives = 67/107 (62.62%), Query Frame = 2 Query: 35 LLASAEQCGSQAGGAVCPGGLCCSKFGFCGNTPAYCTNGCQSQCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACPGKGFYTYDAFIAAANSF 355 L+ SAEQCG QAGG VCPGG CCSKFG+CGNT YC +GCQSQCS R +F +LKHRN+ +CPGKGFYTYDAFIAAA +F Sbjct: 16 LVGSAEQCGGQAGGRVCPGGACCSKFGWCGNTADYCGSGCQSQCSS------------------TGDIGQLITRSMFNDMLKHRNEGSCPGKGFYTYDAFIAAAKAF 104
BLAST of FC932409 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.789e-28 Identity = 61/109 (55.96%), Postives = 69/109 (63.30%), Query Frame = 2 Query: 35 LLASAEQCGSQAGGAVCPGGLCCSKFGFCGNTPAYC--TNGCQSQCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACPGKGFYTYDAFIAAANSF 355 +L SAEQCG QAGGA+CPGGLCCS+FG+CGNT YC NGCQSQCSG R+ F+Q+L HRND CP +GFYTYDAFIAAA SF Sbjct: 17 ILGSAEQCGRQAGGALCPGGLCCSQFGWCGNTDDYCKKENGCQSQCSG--------------SGGDTGGLDSLITRERFDQMLLHRNDGGCPARGFYTYDAFIAAAKSF 111
BLAST of FC932409 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.159e-27 Identity = 60/108 (55.56%), Postives = 69/108 (63.89%), Query Frame = 2 Query: 35 LLASAEQCGSQAGGAVCPGGLCCSKFGFCGNTPAYCT-NGCQSQCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACPGKGFYTYDAFIAAANSF 355 ++ SAEQCG QAGGA+CPGGLCCS+FG+CG+T YCT GCQSQCSG R+ F Q+L HRND ACP +GFYTYDAFIAAA SF Sbjct: 18 VVGSAEQCGRQAGGALCPGGLCCSQFGWCGSTADYCTVPGCQSQCSG------------SGPAPGPGGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSF 113
BLAST of FC932409 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.514e-27 Identity = 57/102 (55.88%), Postives = 67/102 (65.69%), Query Frame = 2 Query: 50 EQCGSQAGGAVCPGGLCCSKFGFCGNTPAYCTNGCQSQCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACPGKGFYTYDAFIAAANSF 355 EQCGSQAGGA+CP LCCS++G+CG+T AYC +GCQSQCSG R LF+Q+L HRNDAACP K FYTYDAF+AAAN+F Sbjct: 21 EQCGSQAGGALCPNCLCCSQYGWCGSTSAYCGSGCQSQCSG----SCGGGGPTPPSGGGGSGVASIVSRSLFDQMLLHRNDAACPAKNFYTYDAFVAAANAF 118
BLAST of FC932409 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 3.373e-27 Identity = 57/104 (54.81%), Postives = 66/104 (63.46%), Query Frame = 2 Query: 44 SAEQCGSQAGGAVCPGGLCCSKFGFCGNTPAYCTNGCQSQCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACPGKGFYTYDAFIAAANSF 355 SAEQCG+QAGGA+CPGGLCCSKFG+CG+T YC +GCQSQCSG D F +LKHRND AC GK FYTYDAF++AA +F Sbjct: 19 SAEQCGTQAGGALCPGGLCCSKFGWCGSTSEYCGDGCQSQCSGSSGGGTLSSLISG---------------DTFNNMLKHRNDNACQGKPFYTYDAFLSAAKAF 107
BLAST of FC932409 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 4.406e-27 Identity = 58/105 (55.24%), Postives = 64/105 (60.95%), Query Frame = 2 Query: 41 ASAEQCGSQAGGAVCPGGLCCSKFGFCGNTPAYCTNGCQSQCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACPGKGFYTYDAFIAAANSF 355 + AEQCGSQAGGAVCP GLCCSKFGFCG+T YC +GCQSQC LF+Q+LK+RND C G GFYTYDAFIAAA SF Sbjct: 21 SKAEQCGSQAGGAVCPNGLCCSKFGFCGSTDPYCGDGCQSQCKS------SPTPTIPTPSTGGGDVGRLVPSSLFDQMLKYRNDGRCAGHGFYTYDAFIAAARSF 119
BLAST of FC932409 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 9.815e-27 Identity = 54/103 (52.43%), Postives = 64/103 (62.14%), Query Frame = 2 Query: 47 AEQCGSQAGGAVCPGGLCCSKFGFCGNTPAYCTNGCQSQCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACPGKGFYTYDAFIAAANSF 355 AEQCGSQAGGA+CP LCCS +G+CG+T YC +GCQSQC G ++LFEQLL HRNDAACP +GFYTYDA + AA +F Sbjct: 23 AEQCGSQAGGALCPNCLCCSSYGWCGSTSDYCGDGCQSQCDGCGGGGGGGGGGGGGGGGGGGAVEAVVSKELFEQLLLHRNDAACPARGFYTYDALVTAAAAF 125
BLAST of FC932409 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 1.674e-26 Identity = 58/103 (56.31%), Postives = 65/103 (63.11%), Query Frame = 2 Query: 50 EQCGSQAGGAVCPGGLCCSKFGFCGNTPAYCT-NGCQSQCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACPGKGFYTYDAFIAAANSF 355 EQCG QAGGA+CPGGLCCS+FG+CG+T YCT GCQSQCSG R+ F Q+L HRND ACP +GFYTYDAFIAAA SF Sbjct: 1 EQCGRQAGGALCPGGLCCSQFGWCGSTADYCTVPGCQSQCSG------------SGPAPGPGGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSF 91
BLAST of FC932409 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 2.856e-26 Identity = 55/102 (53.92%), Postives = 63/102 (61.76%), Query Frame = 2 Query: 50 EQCGSQAGGAVCPGGLCCSKFGFCGNTPAYCTNGCQSQCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACPGKGFYTYDAFIAAANSF 355 EQCG QAGGA+CPGG CCS+FG+CG+T YC GCQSQC G R F+Q+LKHRND ACP KGFYTYDAFIAAA ++ Sbjct: 28 EQCGRQAGGALCPGGNCCSQFGWCGSTTDYCGPGCQSQCGG--------------PSPAPTDLSALISRSTFDQMLKHRNDGACPAKGFYTYDAFIAAAKAY 115
BLAST of FC932409 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4) HSP 1 Score: 117.087 bits (292), Expect = 2.856e-26 Identity = 58/108 (53.70%), Postives = 69/108 (63.89%), Query Frame = 2 Query: 32 ALLASAEQCGSQAGGAVCPGGLCCSKFGFCGNTPAYCTNGCQSQCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACPGKGFYTYDAFIAAANSF 355 A +A AEQCGSQAGGA CP LCCS+FG+CG+TP YC +GCQSQCSG R LF+++L HRND AC KGFYTYDAF+AAA++F Sbjct: 14 ATMAVAEQCGSQAGGATCPNCLCCSRFGWCGSTP-YCGDGCQSQCSG----CGGGSTPVTPTPSGGGGVSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAASAF 116 The following BLAST results are available for this feature:
BLAST of FC932409 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932409 ID=FC932409; Name=FC932409; organism=Citrus clementina; type=EST; length=356bpback to top |