FC932414

Overview
NameFC932414
Unique NameFC932414
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932414 vs. ExPASy Swiss-Prot
Match: FCY21_YEAST (Purine-cytosine permease FCY21 OS=Saccharomyces cerevisiae GN=FCY21 PE=1 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 3.358e-53
Identity = 100/217 (46.08%), Postives = 139/217 (64.06%), Query Frame = 2
Query:   95 IQRIAGKFNIEQRGVERVPDSERTDSSYLNIGSMWLAANMVVSSFAIGVLGKSAFDLGFVDAILVCLFFNLLGVMTVCFFSCFGPPFGLRQMVLSRFWFGWWPVRFIAILNVIACVGWSAANAIVGAQLLNAVN--SQVPGYAGILIITFCTLFVTFAGYKVVHAYEFWSWIPTTIVFIIVLGTFAHSGDFINIPMGVGKSEMGSCLSFGSTVYGFA 739
            + RIA   + E +G+E + + E+TD S LN  SMW +ANMV+ ++AIG LG   FDL F  ++ V +FFNLLG+++V FFS FG   GLRQM+LSR+  G    R  + +N IAC+GW   N +  +Q+LN VN   Q P +AG ++I   T+ VTF GY V+HAYE W+W+P   VF++++   A S  F+      G +  G+ LSFGSTVYGFA
Sbjct:   57 LNRIAAGLSAETKGIEPITEDEKTDDSILNAASMWFSANMVLPAYAIGALGPMVFDLNFGQSVFVIIFFNLLGLVSVAFFSVFGAELGLRQMILSRYLVGNIAARIFSFINFIACIGWGIVNTVASSQVLNMVNPGHQCPLWAGCIVIIGATVIVTFFGYGVIHAYEKWAWVPNFAVFLVIIARLARSKKFVLGEWTSGPTTAGNVLSFGSTVYGFA 273          
BLAST of FC932414 vs. ExPASy Swiss-Prot
Match: FCY2_YEAST (Purine-cytosine permease FCY2 OS=Saccharomyces cerevisiae GN=FCY2 PE=1 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 2.177e-52
Identity = 103/211 (48.82%), Postives = 136/211 (64.45%), Query Frame = 2
Query:  119 NIEQRGVERVPDSERTDSSYLNIGSMWLAANMVVSSFAIGVLGKSAFDLGFVDAILVCLFFNLLGVMTVCFFSCFGPPFGLRQMVLSRFWFGWWPVRFIAILNVIACVGWSAANAIVGAQLLNAVNS----QVPGYAGILIITFCTLFVTFAGYKVVHAYEFWSWIPTTIVFIIVLGTFAHSGDFINIPMGVGKSEMGSCLSFGSTVYGFA 739
            N E +GVE V + E+TD S LN  SMW +ANMV++S+A+G LG   F L F  ++LV +FFN++G++ V FFS FG   GLRQM+LSR+  G    R  +++NVIACVGW   N  V AQLLN VN       P +AG LII   T+ VTF GY V+HAYE WSW+P   VF++++   + SG F       G +  GS LSFGS+++GFA
Sbjct:   68 NAETKGVEPVTEDEKTDDSILNAASMWFSANMVIASYALGALGPMVFGLNFGQSVLVIIFFNIMGLIFVAFFSVFGAELGLRQMILSRYLVGNVTARIFSLINVIACVGWGIVNTSVSAQLLNMVNEGSGHVCPIWAGCLIIIGGTVLVTFFGYSVIHAYEKWSWVPNFAVFLVIIAQLSRSGKFKGGEWVGGATTAGSVLSFGSSIFGFA 278          
BLAST of FC932414 vs. ExPASy Swiss-Prot
Match: FCY22_YEAST (Purine-cytosine permease FCY22 OS=Saccharomyces cerevisiae GN=FCY22 PE=1 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.475e-50
Identity = 102/228 (44.74%), Postives = 139/228 (60.96%), Query Frame = 2
Query:   68 EYGDSLYAKIQRIAGKFNIEQRGVERVPDSERTDSSYLNIGSMWLAANMVVSSFAIGVLGKSAFDLGFVDAILVCLFFNLLGVMTVCFFSCFGPPFGLRQMVLSRFWFGWWPVRFIAILNVIACVGWSAANAIVGAQLLNAVNS----QVPGYAGILIITFCTLFVTFAGYKVVHAYEFWSWIPTTIVFIIVLGTFAHSGDFINIPMGVGKSEMGSCLSFGSTVYGFA 739
            E+ D+  +   RIA   N E +G+E V + E+ D S LN  ++W +ANMV+ ++++G LG   F L F  ++LV +FFN+LG++ V  FS FG   GLRQM+LSR+  G    RF +++NVIACVGW   N  V AQLLN VN       P +AG LII   T+ VTF GY VVHAYE WSW+P    F++++   + SG F       G +  G  LSFGS+V+G A
Sbjct:   48 EFIDNKPSFFNRIAAALNAETKGIEPVTEDEKNDDSILNAATIWFSANMVIVAYSVGALGPLVFGLNFGQSVLVIIFFNILGLIPVALFSLFGVELGLRQMILSRYLAGNITARFFSLVNVIACVGWCVLNISVSAQLLNMVNEGSGHNCPIWAGCLIIAGGTVLVTFFGYSVVHAYEKWSWVPNFAAFLVIIAQLSRSGKFKGGEWVGGATTAGGVLSFGSSVFGSA 275          
BLAST of FC932414 vs. ExPASy Swiss-Prot
Match: TPN1_YEAST (Vitamin B6 transporter TPN1 OS=Saccharomyces cerevisiae GN=TPN1 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.421e-27
Identity = 66/210 (31.43%), Postives = 114/210 (54.29%), Query Frame = 2
Query:  122 IEQRGVERVPDSERTDSS--YLNIGSMWLAANMVVSSFAIGVLGKSAFDLGFVDAILVCLFFNLLGVMTVCFFSCFGPPFGLRQMVLSRFWFGWWPVRFIAILNVIACVGWSAANAIVGAQLLNAV-NSQVPGYAGILIITFCTLFVTFAGYKVVHAYEFWSWIPTTIVFIIVLGTFAHSGDFINIPMGVG----KSEMGSCLSFGSTVY 730
            +E  G++R+   ER  S   +L++  +WL+A   +SS +  +LG   F L F +++   L    +G +   + S  GP  G RQMV +R+ FGWW V+ +A+ ++I  +GWS  N++VG ++L A+ N +VP + GI+I+T C+  V   G K V   E +  +P    F+++  + +    F+N  +  G     +  G+ +SF S  Y
Sbjct:   68 VESTGIQRISPYERGTSKKQFLHVAGLWLSATGGLSSMSSFLLGPLLFGLSFRESVASSLISVTIGCLIAAYCSIMGPQSGCRQMVTARYLFGWWFVKLVALASIIGVMGWSVVNSVVGGEMLAAISNDKVPLWVGIVIVTVCSFLVAIFGIKQVIKVETYLSVPVLTAFLLLYISSSDKYSFVNAYVSKGNLDSSTRKGNWMSFFSLCY 277          
BLAST of FC932414 vs. ExPASy Swiss-Prot
Match: TPN1_SACPS (Vitamin B6 transporter TPN1 OS=Saccharomyces pastorianus GN=TPN1 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.856e-27
Identity = 66/210 (31.43%), Postives = 114/210 (54.29%), Query Frame = 2
Query:  122 IEQRGVERVPDSERTDSS--YLNIGSMWLAANMVVSSFAIGVLGKSAFDLGFVDAILVCLFFNLLGVMTVCFFSCFGPPFGLRQMVLSRFWFGWWPVRFIAILNVIACVGWSAANAIVGAQLLNAV-NSQVPGYAGILIITFCTLFVTFAGYKVVHAYEFWSWIPTTIVFIIVLGTFAHSGDFINIPMGVG----KSEMGSCLSFGSTVY 730
            +E  G++R+   ER  S   +L++  +WL+A   +SS +  +LG   F L F +++   L    +G +   + S  GP  G RQMV +R+ FGWW V+ +A+ ++I  +GWS  N++VG ++L A+ N +VP + GI+I+T C+  V   G K V   E +  +P    F+++  + +    F+N  +  G     +  G+ +SF S  Y
Sbjct:   68 VESTGIQRISPYERGTSKKQFLHVAGLWLSATGGLSSMSSFLLGPLLFGLSFRESLASSLISVTIGCLIAAYCSIMGPQSGCRQMVTARYLFGWWFVKLVALASIIGVMGWSVVNSVVGGEMLAAISNDKVPLWVGIVIVTVCSFLVAIFGIKQVIKVETYLSVPVLTAFLLLYISSSDKYSFVNAYVSKGNLDSSTRKGNWMSFFSLCY 277          
The following BLAST results are available for this feature:
BLAST of FC932414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
FCY21_YEAST3.358e-5346.08Purine-cytosine permease FCY21 OS=Saccharomyces ce... [more]
FCY2_YEAST2.177e-5248.82Purine-cytosine permease FCY2 OS=Saccharomyces cer... [more]
FCY22_YEAST3.475e-5044.74Purine-cytosine permease FCY22 OS=Saccharomyces ce... [more]
TPN1_YEAST1.421e-2731.43Vitamin B6 transporter TPN1 OS=Saccharomyces cerev... [more]
TPN1_SACPS1.856e-2731.43Vitamin B6 transporter TPN1 OS=Saccharomyces pasto... [more]
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Properties
Property NameValue
Genbank descriptionC34208D02EF PostHarveN Citrus clementina cDNA clone C34208D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932414 ID=FC932414; Name=FC932414; organism=Citrus clementina; type=EST; length=740bp
CTCCGACTTGCATAGCAATGAGATATTCGATCACTCCAGTGATGGCGCCG
TGCCCGGCGAGAGCTTTGAATACGGTGATTCGTTGTACGCCAAGATTCAG
CGTATAGCCGGCAAGTTCAACATCGAGCAGCGAGGTGTCGAGCGAGTTCC
AGATTCTGAGCGGACCGATTCGTCCTATCTTAACATTGGTAGCATGTGGT
TGGCCGCAAACATGGTCGTCAGCTCCTTCGCTATTGGAGTTCTTGGAAAG
TCTGCATTCGATTTGGGCTTTGTTGATGCCATTTTGGTCTGTCTCTTTTT
CAACCTCCTTGGTGTTATGACCGTGTGCTTCTTCTCGTGCTTTGGTCCCC
CCTTTGGGCTGCGCCAGATGGTGCTTTCACGATTCTGGTTTGGATGGTGG
CCTGTCAGATTCATCGCCATTCTTAACGTCATCGCTTGTGTTGGTTGGTC
TGCTGCCAATGCCATTGTCGGGGCCCAGCTCCTCAACGCGGTGAACAGTC
AAGTCCCCGGATACGCCGGTATCCTTATCATCACGTTCTGCACGCTCTTC
GTTACCTTTGCTGGGTACAAGGTCGTTCACGCATATGAGTTTTGGAGTTG
GATCCCCACCACCATTGTGTTTATCATTGTGCTCGGCACATTCGCCCACT
CCGGCGATTTCATTAACATTCCCATGGGAGTCGGAAAATCCGAAATGGGN
TCCTGTCTATCCTTTGGATCCACTGTCTATGGTTTCGCAA
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