FC932420
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932420 vs. ExPASy Swiss-Prot
Match: KCS6_ARATH (3-ketoacyl-CoA synthase 6 OS=Arabidopsis thaliana GN=CUT1 PE=2 SV=1) HSP 1 Score: 331.643 bits (849), Expect = 2.261e-90 Identity = 157/195 (80.51%), Postives = 177/195 (90.77%), Query Frame = 3 Query: 99 MPQI-LPDFSNSVKLKYVKLGYQYLVNHILYLLLVPIMVAILIEVLRLGPYEILNLWKSLHFDLVQILCSSFLIIFIATVYFMSKPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLF 680 MPQ +P+FS+SVKLKYVKLGYQYLVNH L LL+PIM + +E+LR+GP EILN+W SL FDLVQ+LCSSF +IFI+TVYFMSKPR +YLVDY+CYKPPVTCRVPFATFMEHSRLILK+ PKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTM+AAR EA++VIF AMD L +KTGLKPKD+DILIVNCSLF Sbjct: 1 MPQAPMPEFSSSVKLKYVKLGYQYLVNHFLSFLLIPIMAIVAVELLRMGPEEILNVWNSLQFDLVQVLCSSFFVIFISTVYFMSKPRTIYLVDYSCYKPPVTCRVPFATFMEHSRLILKDKPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMDAARSEAQMVIFEAMDDLFKKTGLKPKDVDILIVNCSLF 195
BLAST of FC932420 vs. ExPASy Swiss-Prot
Match: KCS5_ARATH (3-ketoacyl-CoA synthase 5 OS=Arabidopsis thaliana GN=KCS5 PE=2 SV=1) HSP 1 Score: 316.62 bits (810), Expect = 7.527e-86 Identity = 149/190 (78.42%), Postives = 175/190 (92.11%), Query Frame = 3 Query: 111 LPDFSNSVKLKYVKLGYQYLVNHILYLLLVPIMVAILIEVLRLGPYEILNLWKSLHFDLVQILCSSFLIIFIATVYFMSKPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLF 680 + DFS+SVKLKYVKLGYQYL+N+ L LLL+P++ + IE+LR+GP EIL++ SLHF+L+ ILCSSFLIIF++TVYFMSKPR VYLVDY+CYKPPVTCRVPF++FMEHSRLILK+NPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTME+AR EA++VIF+AM+ L + TGLKPKDIDILIVNCSLF Sbjct: 1 MSDFSSSVKLKYVKLGYQYLINNFLTLLLIPVIATVAIELLRMGPEEILSVLNSLHFELLHILCSSFLIIFVSTVYFMSKPRTVYLVDYSCYKPPVTCRVPFSSFMEHSRLILKDNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMESARNEAQMVIFTAMEDLFKNTGLKPKDIDILIVNCSLF 190
BLAST of FC932420 vs. ExPASy Swiss-Prot
Match: KCS9_ARATH (3-ketoacyl-CoA synthase 9 OS=Arabidopsis thaliana GN=KCS9 PE=2 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 3.410e-54 Identity = 102/190 (53.68%), Postives = 135/190 (71.05%), Query Frame = 3 Query: 111 LPDFSNSVKLKYVKLGYQYLVNHILYLLLVPIMVAILIEVLRLGPYEILNLWKSLHFDLVQILCSSFLIIFIATVYFMSKPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLF 680 LP+F SV +KYVKLGY YL+ H+ L LVP+M ++ E+ RL ++ +W L ++LV + S L IF +TVY MS+PR VYLVDY+CY PP + +V + FM+HS+LI N S+EFQ +ILERSGLGEET LP A+H IPP PTM AAR E+E V+F A+D L + T + P+DI +L+VNCSLF Sbjct: 25 LPNFLQSVNMKYVKLGYHYLITHLFKLCLVPLMAVLVTEISRLTTDDLYQIWLHLQYNLVAFIFLSALAIFGSTVYIMSRPRSVYLVDYSCYLPPESLQVKYQKFMDHSKLIEDFNESSLEFQRKILERSGLGEETYLPEALHCIPPRPTMMAAREESEQVMFGALDKLFENTKINPRDIGVLVVNCSLF 214
BLAST of FC932420 vs. ExPASy Swiss-Prot
Match: KCS4_ARATH (3-ketoacyl-CoA synthase 4 OS=Arabidopsis thaliana GN=KCS4 PE=2 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 7.597e-54 Identity = 101/192 (52.60%), Postives = 139/192 (72.40%), Query Frame = 3 Query: 105 QILPDFSNSVKLKYVKLGYQYLVNHILYLLLVPIMVAILIEVLRLGPYEILNLWKSLHFDLVQILCSSFLIIFIATVYFMSKPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLF 680 ++LPDF SV LKYVKLGY YL++++L L L P+ V I +E ++ P ++ LW L ++LV I+ S +++F TVY M++PR VYLVD++CY PP + P+A FMEHSRL + ++EFQ +ILERSGLGE+T +P A+HY+PP +M AAR EAE V+F A+D+L T +KPKDI IL+VNCSLF Sbjct: 27 RMLPDFLQSVNLKYVKLGYHYLISNLLTLCLFPLAVVISVEASQMNPDDLKQLWIHLQYNLVSIIICSAILVFGLTVYVMTRPRPVYLVDFSCYLPPDHLKAPYARFMEHSRLTGDFDDSALEFQRKILERSGLGEDTYVPEAMHYVPPRISMAAAREEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLF 218
BLAST of FC932420 vs. ExPASy Swiss-Prot
Match: KCS11_ARATH (3-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana GN=KCS11 PE=1 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.483e-49 Identity = 92/190 (48.42%), Postives = 133/190 (70.00%), Query Frame = 3 Query: 111 LPDFSNSVKLKYVKLGYQYLVNHILYLLLVPIMVAILIEVLRLGPYEILNLWKSLHFDLVQILCSSFLIIFIATVYFMSKPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLF 680 LPDF SVKLKYVKLGY YL+ H +YL L P+++ I ++ ++ +LW+ L ++L+ ++ S L++F+ T+YFM++PR VYLV+++C+KP + + FM+ S+L +++EFQ +IL+RSGLGE T LP A+ +PP P M+ AR EAE V+F A+D LL KT + PKDI ILIVNCSLF Sbjct: 17 LPDFKKSVKLKYVKLGYHYLITHGMYLFLSPLVLVIAAQISTFSVTDLRSLWEHLQYNLISVVVCSMLLVFLMTIYFMTRPRPVYLVNFSCFKPDESRKCTKKIFMDRSKLTGSFTEENLEFQRKILQRSGLGESTYLPEAVLNVPPNPCMKEARKEAETVMFGAIDELLAKTNVNPKDIGILIVNCSLF 206
BLAST of FC932420 vs. ExPASy Swiss-Prot
Match: KCS19_ARATH (3-ketoacyl-CoA synthase 19 OS=Arabidopsis thaliana GN=KCS19 PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.450e-44 Identity = 87/193 (45.08%), Postives = 132/193 (68.39%), Query Frame = 3 Query: 102 PQILPDFSNSVKLKYVKLGYQYLVNHILYLLLVPIMVAILIEVLRLGPYEILNLWKSLHFDLVQILCSSFLIIFIATVYFMSKPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLF 680 P LP+F SV+LKYVKLGY YL+++ LY+LL+P++ A + + ++ L+ +L F + ++ L+I ++T YF ++PR V+L+D++CYKP + TFM+ S+ + ++ FQ +ILERSGLG++T P A+ +PP P ME AR EAE V+F A+D++L+KTG+KPKDI IL+VNCSLF Sbjct: 25 PNNLPNFLLSVRLKYVKLGYHYLISNALYILLLPLLAATIANLSSFTINDLSLLYNTLRFHFLSATLATALLISLSTAYFTTRPRRVFLLDFSCYKPDPSLICTRETFMDRSQRVGIFTEDNLAFQQKILERSGLGQKTYFPEALLRVPPNPCMEEARKEAETVMFGAIDAVLEKTGVKPKDIGILVVNCSLF 217
BLAST of FC932420 vs. ExPASy Swiss-Prot
Match: KCS10_ARATH (3-ketoacyl-CoA synthase 10 OS=Arabidopsis thaliana GN=FDH PE=1 SV=2) HSP 1 Score: 163.696 bits (413), Expect = 8.155e-40 Identity = 85/191 (44.50%), Postives = 122/191 (63.87%), Query Frame = 3 Query: 111 LPDFSNSVKLKYVKLGYQYLVNHILYLLLVPIMVAILIEVLRLGPYEILNLWKSL-HFDLVQILCSSFLIIFIATVYFMSKPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLF 680 LPDF SV LKYVKLGY YL+NH +YL +P++V L+ +G +WK L +DL ++ + + A VYFMS+PR VYL+D+ACYKP +V F+E +R K + +++ F+ RIL+ SG+G+ET +P +I TM+ R EA VIF A+D L +KT +KPKD+ +L+VNCS+F Sbjct: 39 LPDFLQSVNLKYVKLGYHYLINHAVYLATIPVLV--LVFSAEVGSLSREEIWKKLWDYDLATVIGFFGVFVLTACVYFMSRPRSVYLIDFACYKPSDEHKVTKEEFIELARKSGKFDEETLGFKKRILQASGIGDETYVPRSISSSENITTMKEGREEASTVIFGALDELFEKTRVKPKDVGVLVVNCSIF 227
BLAST of FC932420 vs. ExPASy Swiss-Prot
Match: KCS2_ARATH (Probable 3-ketoacyl-CoA synthase 2 OS=Arabidopsis thaliana GN=KCS2 PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.065e-39 Identity = 85/179 (47.49%), Postives = 115/179 (64.25%), Query Frame = 3 Query: 144 YVKLGYQYLVNHILYLLLVPIMVAILIEVLRLGPYEILNLWKSLHFDLVQILCSSFLIIFIATVYFMSKPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLF 680 YVKLGY YL+ H L+ +P+M + + V L + + S F V L I + V+FMS+PR +YL+DY+CY PP + +V + FM +S LI + S+EFQ +IL RSGLGEET LP +IH IPP PTM AAR EAE VIF A+D+L + T + P++I +L+VNCSLF Sbjct: 15 YVKLGYHYLITHFFKLMFLPLMAVLFMNVSLLSLNHLQLYYNSTGFIFVITLA-----IVGSIVFFMSRPRSIYLLDYSCYLPPSSQKVSYQKFMNNSSLIQDFSETSLEFQRKILIRSGLGEETYLPDSIHSIPPRPTMAAAREEAEQVIFGALDNLFENTKINPREIGVLVVNCSLF 188
BLAST of FC932420 vs. ExPASy Swiss-Prot
Match: KCS17_ARATH (3-ketoacyl-CoA synthase 17 OS=Arabidopsis thaliana GN=KCS17 PE=2 SV=2) HSP 1 Score: 162.155 bits (409), Expect = 2.373e-39 Identity = 84/191 (43.98%), Postives = 126/191 (65.97%), Query Frame = 3 Query: 111 LPDFSNSVKLKYVKLGYQYLVNHILYLLLVPI-MVAILIEVLRLGPYEILNLWKSLHFDLVQILCSSFLIIFIATVYFMSKPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLF 680 LP+F SV+LKYVKLGY YL+++ +Y+L++P+ ++A L +L L F + + L+IF+ T+YF ++PR ++L+D+ACYKP + TFM+ S+ + ++ FQ +ILERSGLG++T P A+ +PP P M AR EAE V+F A+D++L+KTG+ PKDI IL+VNCSLF Sbjct: 22 LPNFLLSVRLKYVKLGYHYLISNAVYILILPVGLLAATSSSFSLTDLTLLYN-HLLKFHFLSSTLFAALLIFLTTLYFTTRPRRIFLLDFACYKPDSSLICTRETFMDRSQRVGIFTEDNLAFQQKILERSGLGQKTYFPEALLRVPPNPCMSEARKEAETVMFGAIDAVLEKTGVNPKDIGILVVNCSLF 211
BLAST of FC932420 vs. ExPASy Swiss-Prot
Match: KCS1_ARATH (3-ketoacyl-CoA synthase 1 OS=Arabidopsis thaliana GN=KCS1 PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.669e-32 Identity = 77/195 (39.49%), Postives = 113/195 (57.95%), Query Frame = 3 Query: 111 LPDFSNSVKLKYVKLGYQYLVNH---ILYLLLVPIMVAILIEVLRLGPYEILNLW--KSLHFDLVQILCSSFLIIFIATVYFMSKPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLF 680 LPD SVKLKYVKLG N + +L+++P+ +L+++ L LW +++ D L + F+ T+Y ++ + VYLVD++CYKP ++ +F+ + +V+FQ RI R+GLG+ET LP I PP M AR EAE V+F A+DSL +KTG+KP ++ ILIVNCSLF Sbjct: 34 LPDLLTSVKLKYVKLGLHNSCNVTTILFFLIILPLTGTVLVQLTGLTFDTFSELWSNQAVQLDTATRLTCLVFLSFVLTLYVANRSKPVYLVDFSCYKPEDERKISVDSFLTMTEENGSFTDDTVQFQQRISNRAGLGDETYLPRGITSTPPKLNMSEARAEAEAVMFGALDSLFEKTGIKPAEVGILIVNCSLF 228 The following BLAST results are available for this feature:
BLAST of FC932420 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932420 ID=FC932420; Name=FC932420; organism=Citrus clementina; type=EST; length=680bpback to top |