FC932441

Overview
NameFC932441
Unique NameFC932441
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932441 vs. ExPASy Swiss-Prot
Match: PIP15_MAIZE (Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1)

HSP 1 Score: 309.301 bits (791), Expect = 1.345e-83
Identity = 157/205 (76.59%), Postives = 169/205 (82.44%), Query Frame = 3
Query:  108 DVRLGANKFTERQPIGTAAQSQDGKDYVXXXXXXXXXXXXXTSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALIYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHXP 722
            DVRLGAN+++ERQPIGTAAQ  + KDY              TSWSFYRAGIAEF+ATFLFLYIS+LTVMGV KS++KC+TVGIQGIAW+FGGMIFAL+YCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGF               V  GYTKGDGLGAEI+GTFVLVYTVFSATDAKRSARDSH P
Sbjct:    7 DVRLGANRYSERQPIGTAAQGTEEKDYKEPPPAPLFEAEELTSWSFYRAGIAEFVATFLFLYISILTVMGVSKSSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQ-EGLYMGAGGGANAVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRSARDSHVP 210          
BLAST of FC932441 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3)

HSP 1 Score: 308.145 bits (788), Expect = 2.996e-83
Identity = 157/205 (76.59%), Postives = 167/205 (81.46%), Query Frame = 3
Query:  108 DVRLGANKFTERQPIGTAAQSQDGKDYVXXXXXXXXXXXXXTSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALIYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHXP 722
            DVRLGANKF+ERQPIGTAAQ  D KDY               SWSFYRAGIAEF+ATFLFLYI+VLTVMGV  S +KC+TVGIQGIAW+FGGMIFAL+YCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGF               VA GYTKGDGLGAEI+GTF+LVYTVFSATDAKR+ARDSH P
Sbjct:    7 DVRLGANKFSERQPIGTAAQGSDDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVNNSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQ-KGLYETTGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVP 210          
BLAST of FC932441 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 306.99 bits (785), Expect = 6.675e-83
Identity = 158/206 (76.70%), Postives = 167/206 (81.07%), Query Frame = 3
Query:  108 DVRLGANKFTERQPIGTAAQSQDG-KDYVXXXXXXXXXXXXXTSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALIYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHXP 722
            DV LGANKF ERQP+G AAQSQD  KDY              TSWSFYRAGIAEFIATFLFLYI+VLTVMGVV+ ++KC TVGIQGIAWAFGGMIFAL+YCTAGISGGHINPAVTFGLFLARKLSLTRA+FYMVMQ LGAICGAGVVKGF               VA GYTKGDGLGAEI+GTF+LVYTVFSATDAKRSARDSH P
Sbjct:    7 DVSLGANKFPERQPLGIAAQSQDEPKDYQEPPPAPLFEPSELTSWSFYRAGIAEFIATFLFLYITVLTVMGVVRESSKCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYMVMQVLGAICGAGVVKGFEGKQRFGDLNGGANFVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVP 212          
BLAST of FC932441 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2)

HSP 1 Score: 305.064 bits (780), Expect = 2.536e-82
Identity = 155/205 (75.61%), Postives = 167/205 (81.46%), Query Frame = 3
Query:  108 DVRLGANKFTERQPIGTAAQSQDGKDYVXXXXXXXXXXXXXTSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALIYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHXP 722
            DVRLGAN++TERQPIGTAAQ  + KDY              TSWSFYRAGIAEF+ATFLFLYIS+LTVMGV KS +KC+TVGIQGIAW+FGGMIFAL+YCTAGISGGHINPAVTFGLFLARKLSLTRA+FYM MQCLGAICGAGVVKGF               V  GYTKGDGLGAEI+GTFVLVYTVFSATDAKR+ARDSH P
Sbjct:    7 DVRLGANRYTERQPIGTAAQGAEEKDYREPPAAPVFEVEELTSWSFYRAGIAEFVATFLFLYISILTVMGVNKSASKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMAMQCLGAICGAGVVKGFQ-RGLYMGSGGGANAVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVP 210          
BLAST of FC932441 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 5.651e-82
Identity = 154/206 (74.76%), Postives = 169/206 (82.04%), Query Frame = 3
Query:  108 DVRLGANKFTERQPIGTAAQ-SQDGKDYVXXXXXXXXXXXXXTSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALIYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHXP 722
            DVRLGANKF+ERQPIGTAAQ + D KDY               SWSFYRAGIAEF+ATFLFLYI++LTVMGV KS +KC+TVGIQGIAW+FGGMIFAL+YCTAGISGGHINPAVTFGLFLARKLSLTRALFY++MQCLGA+CGAGVVKGF               VA GYTKGDGLGAEI+GTF+LVYTVFSATDAKR+ARDSH P
Sbjct:    7 DVRLGANKFSERQPIGTAAQGAADDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGVSKSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIIMQCLGAVCGAGVVKGFQ-QGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVP 211          
BLAST of FC932441 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.259e-81
Identity = 155/209 (74.16%), Postives = 168/209 (80.38%), Query Frame = 3
Query:  108 DVRLGANKFTERQPIGTAAQS----QDGKDYVXXXXXXXXXXXXXTSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALIYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHXP 722
            DVRLGANKF+ERQPIGTAAQ      D KDY               SWSFYRAGIAEF+ATFLFLYI+VLTVMGV KS +KC+TVGIQGIAW+FGGMIFAL+YCTAGISGGHINPAVTFGLFLARKLSLTRA+FY++MQCLGAICGAGVVKGF               VA GYTKGDGLGAEI+GTF+LVYTVFSATDAKR+ARDSH P
Sbjct:    7 DVRLGANKFSERQPIGTAAQGAGAGDDDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIIMQCLGAICGAGVVKGFQ-QGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVP 214          
BLAST of FC932441 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.147e-81
Identity = 156/205 (76.10%), Postives = 167/205 (81.46%), Query Frame = 3
Query:  108 DVRLGANKFTERQPIGTAAQSQDGKDYVXXXXXXXXXXXXXTSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALIYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHXP 722
            DVR+GANKF ERQPIGT+AQS D KDY              +SWSFYRAGIAEFIATFLFLYI+VLTVMGV ++   C++VGIQGIAWAFGGMIFAL+YCTAGISGGHINPAVTFGLFLARKLSLTRA+FYM+MQCLGAICGAGVVKGF               VAHGYTKG GLGAEIIGTFVLVYTVFSATDAKRSARDSH P
Sbjct:    7 DVRVGANKFPERQPIGTSAQSTD-KDYKEPPPAPLFEPGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAGVVKGFQ-PTPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVP 209          
BLAST of FC932441 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.147e-81
Identity = 153/206 (74.27%), Postives = 169/206 (82.04%), Query Frame = 3
Query:  108 DVRLGANKFTERQPIGTAAQSQ-DGKDYVXXXXXXXXXXXXXTSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALIYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHXP 722
            DVRLGAN+++ERQPIGTAAQ   D KDY               SWSFYRAGIAEF+ATFLFLYI++LTVMGV KS++KC+TVGIQGIAW+FGGMIFAL+YCTAGISGGHINPAVTFGLFLARKLSLTRA+FY+VMQCLGAICGAGVVKGF               VA GYTKGDGLGAEI+GTF+LVYTVFSATDAKR+ARDSH P
Sbjct:    7 DVRLGANRYSERQPIGTAAQGAGDDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGVSKSSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFQ-QGLYMGNGGGANVVASGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVP 211          
BLAST of FC932441 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 297.36 bits (760), Expect = 5.289e-80
Identity = 153/205 (74.63%), Postives = 165/205 (80.49%), Query Frame = 3
Query:  108 DVRLGANKFTERQPIGTAAQSQDGKDYVXXXXXXXXXXXXXTSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALIYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHXP 722
            DV +GANKF ERQPIGTAAQ++  KDY               SWSFYRAGIAEFIATFLFLY++VLTVMGV ++   C++VGIQGIAWAFGGMIFAL+YCTAGISGGHINPAVTFGLFLARKLSLTRALFY+VMQCLGAICGAGVVKGF               VAHGYTKG GLGAEI+GTFVLVYTVFSATDAKRSARDSH P
Sbjct:    7 DVNVGANKFPERQPIGTAAQTES-KDYKEPPPAPFFEPGELKSWSFYRAGIAEFIATFLFLYVTVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIVMQCLGAICGAGVVKGFQ-PGLYQTNGGGANVVAHGYTKGSGLGAEIVGTFVLVYTVFSATDAKRSARDSHVP 209          
BLAST of FC932441 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 5.289e-80
Identity = 154/205 (75.12%), Postives = 166/205 (80.98%), Query Frame = 3
Query:  108 DVRLGANKFTERQPIGTAAQSQDGKDYVXXXXXXXXXXXXXTSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALIYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHXP 722
            DVR+GANKF ERQPIGT+AQ+   KDY              +SWSFYRAGIAEFIATFLFLYI+VLTVMGV ++   C++VGIQGIAWAFGGMIFAL+YCTAGISGGHINPAVTFGLFLARKLSLTRA+FY+VMQCLGAICGAGVVKGF               VAHGYTKG GLGAEIIGTFVLVYTVFSATDAKRSARDSH P
Sbjct:    7 DVRVGANKFPERQPIGTSAQTD--KDYKEPPPAPFFEPGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIVMQCLGAICGAGVVKGFQ-PNPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVP 208          
The following BLAST results are available for this feature:
BLAST of FC932441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
PIP15_MAIZE1.345e-8376.59Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1[more]
PIP12_ORYSJ2.996e-8376.59Probable aquaporin PIP1-2 OS=Oryza sativa subsp. j... [more]
PIP2_PEA6.675e-8376.70Probable aquaporin PIP-type 7a OS=Pisum sativum GN... [more]
PIP13_ORYSJ2.536e-8275.61Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica ... [more]
PIP12_MAIZE5.651e-8274.76Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1[more]
PIP13_MAIZE1.259e-8174.16Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2... [more]
PIP14_ARATH2.147e-8176.10Probable aquaporin PIP1-4 OS=Arabidopsis thaliana ... [more]
PIP11_ORYSJ2.147e-8174.27Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica G... [more]
PIP15_ARATH5.289e-8074.63Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ... [more]
PIP13_ARATH5.289e-8075.12Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3... [more]

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Properties
Property NameValue
Genbank descriptionC34208F05EF PostHarveN Citrus clementina cDNA clone C34208F05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932441 ID=FC932441; Name=FC932441; organism=Citrus clementina; type=EST; length=727bp
GACTCCCGTAGCAAGATCAAACAGCTACACGCAAACGACTCAAATCTTTT
TTGTCTTTTAGCTAATTAAGTGAAGAAGAGCGAGCGAAAATGGAGGGCAA
AGAAGAGGACGTTAGATTAGGAGCCAATAAGTTCACTGAGAGGCAACCGA
TTGGAACGGCAGCTCAGAGCCAAGATGGAAAGGACTACGTTGAGCCGCCG
CCGGCACCACTCTTCGAGGAAGAAGAGCTCACGTCTTGGTCGTTTTACAG
GGCCGGTATAGCCGAGTTCATAGCCACTTTTCTTTTCTTGTACATCTCCG
TATTGACAGTGATGGGCGTCGTCAAGTCCAACACCAAGTGCTCAACCGTC
GGCATTCAAGGGATTGCATGGGCCTTCGGTGGCATGATCTTCGCGCTCAT
TTACTGCACAGCTGGCATCTCGGGTGGTCATATCAACCCGGCGGTGACAT
TCGGGCTGTTCTTGGCGAGGAAGCTGTCGTTGACACGTGCACTTTTCTAC
ATGGTGATGCAGTGTCTGGGAGCCATCTGTGGTGCTGGCGTTGTAAAGGG
TTTCATGGGTGCCGGCCAATACGGTCGGCTCGGCGGCGGTGCCAATGCTG
TAGCTCATGGCTACACCAAGGGTGATGGTCTTGGTGCCGAGATTATTGGT
ACTTTTGTTCTTGTCTACACAGTTTTCTCTGCCACTGACGCCAAACGTAG
CGCCAGAGACTCTCATNGTCCCTATTT
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