FC932445

Overview
NameFC932445
Unique NameFC932445
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15_ASPNG (60S ribosomal protein L15 OS=Aspergillus niger GN=rpl15 PE=2 SV=1)

HSP 1 Score: 350.517 bits (898), Expect = 5.078e-96
Identity = 165/190 (86.84%), Postives = 173/190 (91.05%), Query Frame = 3
Query:    3 KQSDVIRFLLRVRCWELHQLNAIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXPVSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGINKGHRYNNTKAGRRHTWKRQNTQSYWRYR 572
            KQSDVIRFLLRVRCWEL QLNAIHRASRPSRPDKARRLGYKAKQGYV+Y           P  KGATYGKPTN G+NQLKYQRAL++TAEERVGRR ANLRVLNSYWINQDSTYKY+EVILVDPQHKAIRRDARINWICN VHKHRE+RGLTATGKKSRGINKGHRYNNT++GRRHTWKRQNTQSYWRYR
Sbjct:   14 KQSDVIRFLLRVRCWELRQLNAIHRASRPSRPDKARRLGYKAKQGYVVYRIRVRRGGRKRPAPKGATYGKPTNMGINQLKYQRALRATAEERVGRRCANLRVLNSYWINQDSTYKYFEVILVDPQHKAIRRDARINWICNAVHKHREARGLTATGKKSRGINKGHRYNNTRSGRRHTWKRQNTQSYWRYR 203          
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15_NEUCR (60S ribosomal protein L15 OS=Neurospora crassa GN=rpl-15 PE=3 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.294e-91
Identity = 160/190 (84.21%), Postives = 167/190 (87.89%), Query Frame = 3
Query:    3 KQSDVIRFLLRVRCWELHQLNAIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXPVSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGINKGHRYNNTKAGRRHTWKRQNTQSYWRYR 572
            KQSDV+RFLLRVRCWEL QLN IHRASRPSRPDKARRLGYKAKQGYVIY           PV KGATYGKPTN GVNQLKYQR+LKSTAEERVGRR ANLRVLNSYWINQDSTYKY+EVILVDPQHKAIRRD RINWI NPVHKHRESRGLT+TGK+SRG+NKGHRYN T+AGRR TWKR NT S WRYR
Sbjct:   14 KQSDVVRFLLRVRCWELRQLNVIHRASRPSRPDKARRLGYKAKQGYVIYRARVRRGGRKKPVPKGATYGKPTNQGVNQLKYQRSLKSTAEERVGRRCANLRVLNSYWINQDSTYKYFEVILVDPQHKAIRRDPRINWIVNPVHKHRESRGLTSTGKRSRGLNKGHRYNKTRAGRRKTWKRHNTLSLWRYR 203          
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15B_YEAST (60S ribosomal protein L15-B OS=Saccharomyces cerevisiae GN=RPL15B PE=1 SV=2)

HSP 1 Score: 327.405 bits (838), Expect = 4.604e-89
Identity = 154/190 (81.05%), Postives = 167/190 (87.89%), Query Frame = 3
Query:    3 KQSDVIRFLLRVRCWELHQLNAIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXPVSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGINKGHRYNNTKAGRRHTWKRQNTQSYWRYR 572
            KQSDV+RFL RVR WE  Q N IHRA+RP+RPDKARRLGYKAKQG+VIY           PV KGATYGKPTN GVN+LKYQR+L++TAEERVGRRAANLRVLNSYW+NQDSTYKY+EVILVDPQHKAIRRDAR NWICNPVHKHRE+RGLTATGKKSRGINKGH++NNTKAGRR TWKRQNT S WRYR
Sbjct:   14 KQSDVLRFLQRVRVWEYRQKNVIHRAARPTRPDKARRLGYKAKQGFVIYRVRVRRGNRKRPVPKGATYGKPTNQGVNELKYQRSLRATAEERVGRRAANLRVLNSYWVNQDSTYKYFEVILVDPQHKAIRRDARYNWICNPVHKHREARGLTATGKKSRGINKGHKFNNTKAGRRKTWKRQNTLSLWRYR 203          
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15A_YEAST (60S ribosomal protein L15-A OS=Saccharomyces cerevisiae GN=RPL15A PE=1 SV=3)

HSP 1 Score: 325.479 bits (833), Expect = 1.749e-88
Identity = 153/190 (80.53%), Postives = 167/190 (87.89%), Query Frame = 3
Query:    3 KQSDVIRFLLRVRCWELHQLNAIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXPVSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGINKGHRYNNTKAGRRHTWKRQNTQSYWRYR 572
            KQSDV+RFL RVR WE  Q N IHRA+RP+RPDKARRLGYKAKQG+VIY           PV KGATYGKPTN GVN+LKYQR+L++TAEERVGRRAANLRVLNSYW+NQDSTYKY+EVILVDPQHKAIRRDAR NWIC+PVHKHRE+RGLTATGKKSRGINKGH++NNTKAGRR TWKRQNT S WRYR
Sbjct:   14 KQSDVLRFLQRVRVWEYRQKNVIHRAARPTRPDKARRLGYKAKQGFVIYRVRVRRGNRKRPVPKGATYGKPTNQGVNELKYQRSLRATAEERVGRRAANLRVLNSYWVNQDSTYKYFEVILVDPQHKAIRRDARYNWICDPVHKHREARGLTATGKKSRGINKGHKFNNTKAGRRKTWKRQNTLSLWRYR 203          
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15B_SCHPO (60S ribosomal protein L15-B OS=Schizosaccharomyces pombe GN=rpl15b PE=1 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 7.136e-74
Identity = 136/190 (71.58%), Postives = 148/190 (77.89%), Query Frame = 3
Query:    3 KQSDVIRFLLRVRCWELHQLNAIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXPVSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGINKGHRYNNTKAGRRHTWKRQNTQSYWRYR 572
            KQSDV  FL RVR WE  Q+N IHRASRPSRPDKARRLGYKAKQGYVIY           PV KG TYGKP + GVN LKYQR+ + TAEERVGR  +NLRVLNSYW+NQD+TYK++EVILVDP HKAIRRD RINWI NPVHKHRESRGLT+ GKKSRGI KGHRYNN+   +  TW R NT S  RYR
Sbjct:   14 KQSDVNLFLSRVRAWEYRQMNVIHRASRPSRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGQTYGKPVHQGVNHLKYQRSARCTAEERVGRYCSNLRVLNSYWVNQDATYKFFEVILVDPSHKAIRRDPRINWIVNPVHKHRESRGLTSIGKKSRGIGKGHRYNNSP--QHATWLRHNTLSLRRYR 201          
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15A_SCHPO (60S ribosomal protein L15-A OS=Schizosaccharomyces pombe GN=rpl15a PE=2 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 2.076e-73
Identity = 135/190 (71.05%), Postives = 148/190 (77.89%), Query Frame = 3
Query:    3 KQSDVIRFLLRVRCWELHQLNAIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXPVSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGINKGHRYNNTKAGRRHTWKRQNTQSYWRYR 572
            KQSDV  FL RVR WE  Q+N IHRASRPSRPDKARRLGYKAKQGYVIY           PV KG TYGKP + GVN LKYQR+ + TAEERVGR  +NLRVLNSYW+NQD+TYK++EVILVDP HKAIRRD RINWI NPVHKHRESRGLT+ GKKSRGI KGHR+NN+   +  TW R NT S  RYR
Sbjct:   14 KQSDVNLFLSRVRAWEYRQMNVIHRASRPSRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGQTYGKPVHQGVNHLKYQRSARCTAEERVGRYCSNLRVLNSYWVNQDATYKFFEVILVDPSHKAIRRDPRINWIVNPVHKHRESRGLTSIGKKSRGIGKGHRFNNSP--QHATWLRHNTLSLRRYR 201          
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15_RAT (60S ribosomal protein L15 OS=Rattus norvegicus GN=Rpl15 PE=1 SV=2)

HSP 1 Score: 263.462 bits (672), Expect = 8.164e-70
Identity = 124/191 (64.92%), Postives = 148/191 (77.49%), Query Frame = 3
Query:    3 KQSDVIRFLLRVRCWELHQLNAIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXPVSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGINKGHRYNNTKAG-RRHTWKRQNTQSYWRYR 572
            KQSDV+RFLLRVRCW+  QL+A+HRA RP+RPDKARRLGYKAKQGYVIY           PV KGATYGKP +HGVNQLK+ R+L+S AEER GR    LRVLNSYW+ +DSTYK++EVIL+DP HKAIRR+    WI  PVHKHRE RGLT+ G+KSRG+ KGH++++T  G RR  W+R+NT    RYR
Sbjct:   14 KQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR 204          
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15_PONAB (60S ribosomal protein L15 OS=Pongo abelii GN=RPL15 PE=2 SV=3)

HSP 1 Score: 263.462 bits (672), Expect = 8.164e-70
Identity = 124/191 (64.92%), Postives = 148/191 (77.49%), Query Frame = 3
Query:    3 KQSDVIRFLLRVRCWELHQLNAIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXPVSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGINKGHRYNNTKAG-RRHTWKRQNTQSYWRYR 572
            KQSDV+RFLLRVRCW+  QL+A+HRA RP+RPDKARRLGYKAKQGYVIY           PV KGATYGKP +HGVNQLK+ R+L+S AEER GR    LRVLNSYW+ +DSTYK++EVIL+DP HKAIRR+    WI  PVHKHRE RGLT+ G+KSRG+ KGH++++T  G RR  W+R+NT    RYR
Sbjct:   14 KQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR 204          
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15_MOUSE (60S ribosomal protein L15 OS=Mus musculus GN=Rpl15 PE=2 SV=4)

HSP 1 Score: 263.462 bits (672), Expect = 8.164e-70
Identity = 124/191 (64.92%), Postives = 148/191 (77.49%), Query Frame = 3
Query:    3 KQSDVIRFLLRVRCWELHQLNAIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXPVSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGINKGHRYNNTKAG-RRHTWKRQNTQSYWRYR 572
            KQSDV+RFLLRVRCW+  QL+A+HRA RP+RPDKARRLGYKAKQGYVIY           PV KGATYGKP +HGVNQLK+ R+L+S AEER GR    LRVLNSYW+ +DSTYK++EVIL+DP HKAIRR+    WI  PVHKHRE RGLT+ G+KSRG+ KGH++++T  G RR  W+R+NT    RYR
Sbjct:   14 KQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR 204          
BLAST of FC932445 vs. ExPASy Swiss-Prot
Match: RL15_MACFA (60S ribosomal protein L15 OS=Macaca fascicularis GN=RPL15 PE=2 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 8.164e-70
Identity = 124/191 (64.92%), Postives = 148/191 (77.49%), Query Frame = 3
Query:    3 KQSDVIRFLLRVRCWELHQLNAIHRASRPSRPDKARRLGYKAKQGYVIYXXXXXXXXXXXPVSKGATYGKPTNHGVNQLKYQRALKSTAEERVGRRAANLRVLNSYWINQDSTYKYYEVILVDPQHKAIRRDARINWICNPVHKHRESRGLTATGKKSRGINKGHRYNNTKAG-RRHTWKRQNTQSYWRYR 572
            KQSDV+RFLLRVRCW+  QL+A+HRA RP+RPDKARRLGYKAKQGYVIY           PV KGATYGKP +HGVNQLK+ R+L+S AEER GR    LRVLNSYW+ +DSTYK++EVIL+DP HKAIRR+    WI  PVHKHRE RGLT+ G+KSRG+ KGH++++T  G RR  W+R+NT    RYR
Sbjct:   14 KQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR 204          
The following BLAST results are available for this feature:
BLAST of FC932445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
RL15_ASPNG5.078e-9686.8460S ribosomal protein L15 OS=Aspergillus niger GN=... [more]
RL15_NEUCR1.294e-9184.2160S ribosomal protein L15 OS=Neurospora crassa GN=... [more]
RL15B_YEAST4.604e-8981.0560S ribosomal protein L15-B OS=Saccharomyces cerev... [more]
RL15A_YEAST1.749e-8880.5360S ribosomal protein L15-A OS=Saccharomyces cerev... [more]
RL15B_SCHPO7.136e-7471.5860S ribosomal protein L15-B OS=Schizosaccharomyces... [more]
RL15A_SCHPO2.076e-7371.0560S ribosomal protein L15-A OS=Schizosaccharomyces... [more]
RL15_RAT8.164e-7064.9260S ribosomal protein L15 OS=Rattus norvegicus GN=... [more]
RL15_PONAB8.164e-7064.9260S ribosomal protein L15 OS=Pongo abelii GN=RPL15... [more]
RL15_MOUSE8.164e-7064.9260S ribosomal protein L15 OS=Mus musculus GN=Rpl15... [more]
RL15_MACFA8.164e-7064.9260S ribosomal protein L15 OS=Macaca fascicularis G... [more]

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Properties
Property NameValue
Genbank descriptionC34208F09EF PostHarveN Citrus clementina cDNA clone C34208F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932445 ID=FC932445; Name=FC932445; organism=Citrus clementina; type=EST; length=709bp
AGAAGCAGTCCGATGTGATTCGCTTCCTGCTGCGCGTCCGATGCTGGGAG
CTCCACCAGCTGAACGCCATCCACCGTGCCTCGCGTCCCTCGCGCCCCGA
CAAGGCCCGTCGTCTCGGTTACAAGGCCAAGCAGGGTTACGTTATCTACC
GTGCCCGTGTCCGCCGCGGTGGCCGCAAACGCCCTGTCTCCAAGGGTGCC
ACCTACGGCAAGCCCACCAACCACGGTGTCAACCAGCTCAAGTACCAGCG
TGCTCTCAAGTCCACCGCTGAGGAGCGTGTTGGCCGTCGCGCTGCTAACT
TGCGCGTCCTGAACTCCTACTGGATCAACCAGGACTCCACCTACAAGTAC
TACGAGGTCATCCTTGTCGACCCCCAGCACAAGGCCATCCGCCGTGATGC
CCGCATCAACTGGATCTGCAACCCCGTTCACAAGCACCGCGAGTCCCGTG
GCCTCACCGCCACTGGCAAGAAGTCCCGTGGTATCAACAAGGGTCACCGT
TACAACAACACCAAGGCTGGTCGCCGCCACACCTGGAAGCGCCAGAACAC
CCAGAGCTACTGGCGTTACCGTTAAGTGCGGTAGTGCACTTTCACAGTGG
TTTCGGCTGGATCATGTTGGCTACGGCATGTGGTCATTTATTCAGGCACT
TTCCCAGACAGTGTTATCCACGCTGGGCTCAACTTTAATGCAGACCAGCC
GGTTCTGTT
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