FC932482

Overview
NameFC932482
Unique NameFC932482
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length520
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932482 vs. ExPASy Swiss-Prot
Match: NTF4_TOBAC (Mitogen-activated protein kinase homolog NTF4 OS=Nicotiana tabacum GN=NTF4 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.819e-48
Identity = 59/62 (95.16%), Postives = 61/62 (98.39%), Query Frame = 1
Query:  208 GIESIPATLSHGGRFI*YNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKK 393
            GI++IPATLSHGGRFI YNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKK
Sbjct:   29 GIDNIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKK 90          

HSP 2 Score: 88.5817 bits (218), Expect = 5.819e-48
Identity = 42/44 (95.45%), Postives = 43/44 (97.73%), Query Frame = 2
Query:  389 KKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPQME 520
            KKIANAFDNKIDAKRTLREIKLLRHMDHEN+VAIRDIIPPPQ E
Sbjct:   89 KKIANAFDNKIDAKRTLREIKLLRHMDHENIVAIRDIIPPPQRE 132          
BLAST of FC932482 vs. ExPASy Swiss-Prot
Match: MPK6_ARATH (Mitogen-activated protein kinase 6 OS=Arabidopsis thaliana GN=MPK6 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.845e-47
Identity = 66/92 (71.74%), Postives = 68/92 (73.91%), Query Frame = 1
Query:  118 GPPAADTEMXXXXXXXXXXXXXXXXXXXXGGIESIPATLSHGGRFI*YNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKK 393
            G PAADTEM                     GIE+IPATLSHGGRFI YNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSA+NSETNE VAIKK
Sbjct:    6 GQPAADTEMTEAPGGFPAAAPSPQMP----GIENIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSAMNSETNESVAIKK 93          

HSP 2 Score: 85.1149 bits (209), Expect = 4.845e-47
Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 2
Query:  389 KKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPP 511
            KKIANAFDNKIDAKRTLREIKLLRHMDHEN+VAIRDIIPPP
Sbjct:   92 KKIANAFDNKIDAKRTLREIKLLRHMDHENIVAIRDIIPPP 132          
BLAST of FC932482 vs. ExPASy Swiss-Prot
Match: MMK1_MEDSA (Mitogen-activated protein kinase homolog MMK1 OS=Medicago sativa GN=MMK1 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 8.231e-47
Identity = 57/62 (91.94%), Postives = 59/62 (95.16%), Query Frame = 1
Query:  208 GIESIPATLSHGGRFI*YNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKK 393
            GIE+IPA LSHGGRFI YNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSA NSETNEHVA+KK
Sbjct:   24 GIENIPAVLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSAHNSETNEHVAVKK 85          

HSP 2 Score: 88.5817 bits (218), Expect = 8.231e-47
Identity = 42/44 (95.45%), Postives = 43/44 (97.73%), Query Frame = 2
Query:  389 KKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPQME 520
            KKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDI+PPPQ E
Sbjct:   84 KKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIVPPPQRE 127          
BLAST of FC932482 vs. ExPASy Swiss-Prot
Match: MAPK_PEA (Mitogen-activated protein kinase homolog D5 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.072e-46
Identity = 57/62 (91.94%), Postives = 60/62 (96.77%), Query Frame = 1
Query:  208 GIESIPATLSHGGRFI*YNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKK 393
            GIE+IPATLSHGGRFI YNIFGNIFEVTAKY+PPIMPIGKGAYGIVCSA NSETNEHVA+KK
Sbjct:   31 GIENIPATLSHGGRFIQYNIFGNIFEVTAKYRPPIMPIGKGAYGIVCSAHNSETNEHVAVKK 92          

HSP 2 Score: 87.4261 bits (215), Expect = 1.072e-46
Identity = 41/44 (93.18%), Postives = 43/44 (97.73%), Query Frame = 2
Query:  389 KKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPQME 520
            KKIANAFDNKIDAKRTLREIKL+RHMDHENVVAIRDI+PPPQ E
Sbjct:   91 KKIANAFDNKIDAKRTLREIKLVRHMDHENVVAIRDIVPPPQRE 134          
BLAST of FC932482 vs. ExPASy Swiss-Prot
Match: MPK1_ORYSJ (Mitogen-activated protein kinase 1 OS=Oryza sativa subsp. japonica GN=MPK1 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 3.637e-44
Identity = 54/63 (85.71%), Postives = 58/63 (92.06%), Query Frame = 1
Query:  205 GGIESIPATLSHGGRFI*YNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKK 393
            G +E+I ATLSHGGRFI YNIFGN+FEVTAKYKPPI+PIGKGAYGIVCSALNSET E VAIKK
Sbjct:   35 GMMENIQATLSHGGRFIQYNIFGNVFEVTAKYKPPILPIGKGAYGIVCSALNSETGEQVAIKK 97          

HSP 2 Score: 87.0409 bits (214), Expect = 3.637e-44
Identity = 41/42 (97.62%), Postives = 42/42 (100.00%), Query Frame = 2
Query:  389 KKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPQ 514
            KKIANAFDNKIDAKRTLREIKLLRHMDHEN+VAIRDIIPPPQ
Sbjct:   96 KKIANAFDNKIDAKRTLREIKLLRHMDHENIVAIRDIIPPPQ 137          
BLAST of FC932482 vs. ExPASy Swiss-Prot
Match: MPK3_ARATH (Mitogen-activated protein kinase 3 OS=Arabidopsis thaliana GN=MPK3 PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 2.563e-35
Identity = 40/63 (63.49%), Postives = 53/63 (84.13%), Query Frame = 1
Query:  205 GGIESIPATLSHGGRFI*YNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKK 393
            G     PA  +HGG+FI Y+IFG++FE+T+KY+PPI+PIG+GAYGIVCS L++ETNE VA+KK
Sbjct:    6 GQYTDFPAVETHGGQFISYDIFGSLFEITSKYRPPIIPIGRGAYGIVCSVLDTETNELVAMKK 68          

HSP 2 Score: 79.337 bits (194), Expect = 2.563e-35
Identity = 34/41 (82.93%), Postives = 40/41 (97.56%), Query Frame = 2
Query:  389 KKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPP 511
            KKIANAFDN +DAKRTLREIKLLRH+DHEN++AIRD++PPP
Sbjct:   67 KKIANAFDNHMDAKRTLREIKLLRHLDHENIIAIRDVVPPP 107          
BLAST of FC932482 vs. ExPASy Swiss-Prot
Match: MPK10_ARATH (Mitogen-activated protein kinase 10 OS=Arabidopsis thaliana GN=MPK10 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.687e-34
Identity = 44/58 (75.86%), Postives = 51/58 (87.93%), Query Frame = 1
Query:  220 IPATLSHGGRFI*YNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKK 393
            IP TLSH GR+I YN+FG+IFE+ AKYKPPI PIG+GA GIVCSA++SETNE VAIKK
Sbjct:   33 IPGTLSHDGRYIQYNLFGHIFELPAKYKPPIRPIGRGACGIVCSAVDSETNEKVAIKK 90          

HSP 2 Score: 72.0182 bits (175), Expect = 4.687e-34
Identity = 33/44 (75.00%), Postives = 37/44 (84.09%), Query Frame = 2
Query:  389 KKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPQME 520
            KKI   FDN I+AKRTLREIKLLRH DHEN+VAIRD+I PPQ +
Sbjct:   89 KKITQVFDNTIEAKRTLREIKLLRHFDHENIVAIRDVILPPQRD 132          
BLAST of FC932482 vs. ExPASy Swiss-Prot
Match: MPK5_ORYSJ (Mitogen-activated protein kinase 5 OS=Oryza sativa subsp. japonica GN=MPK5 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 7.958e-34
Identity = 40/55 (72.73%), Postives = 48/55 (87.27%), Query Frame = 1
Query:  229 TLSHGGRFI*YNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKK 393
            T++HGGR++ Y+IFGN FEVT KY+PPIMPIG+GAYGIVCS +N ET E VAIKK
Sbjct:   12 TMTHGGRYLLYDIFGNKFEVTNKYQPPIMPIGRGAYGIVCSVMNFETREMVAIKK 66          

HSP 2 Score: 76.2554 bits (186), Expect = 7.958e-34
Identity = 33/41 (80.49%), Postives = 39/41 (95.12%), Query Frame = 2
Query:  389 KKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPP 511
            KKIANAF+N +DAKRTLREIKLLRH+DHEN++ IRD+IPPP
Sbjct:   65 KKIANAFNNDMDAKRTLREIKLLRHLDHENIIGIRDVIPPP 105          
BLAST of FC932482 vs. ExPASy Swiss-Prot
Match: MPK5_ORYSI (Mitogen-activated protein kinase 5 OS=Oryza sativa subsp. indica GN=MPK5 PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 7.958e-34
Identity = 40/55 (72.73%), Postives = 48/55 (87.27%), Query Frame = 1
Query:  229 TLSHGGRFI*YNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKK 393
            T++HGGR++ Y+IFGN FEVT KY+PPIMPIG+GAYGIVCS +N ET E VAIKK
Sbjct:   12 TMTHGGRYLLYDIFGNKFEVTNKYQPPIMPIGRGAYGIVCSVMNFETREMVAIKK 66          

HSP 2 Score: 76.2554 bits (186), Expect = 7.958e-34
Identity = 33/41 (80.49%), Postives = 39/41 (95.12%), Query Frame = 2
Query:  389 KKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPP 511
            KKIANAF+N +DAKRTLREIKLLRH+DHEN++ IRD+IPPP
Sbjct:   65 KKIANAFNNDMDAKRTLREIKLLRHLDHENIIGIRDVIPPP 105          
BLAST of FC932482 vs. ExPASy Swiss-Prot
Match: MPK6_ORYSJ (Mitogen-activated protein kinase 6 OS=Oryza sativa subsp. japonica GN=MPK6 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.036e-33
Identity = 39/63 (61.90%), Postives = 49/63 (77.78%), Query Frame = 1
Query:  205 GGIESIPATLSHGGRFI*YNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKK 393
            GG   I    +HGGR++ YN++GN FEV++KY PPI PIG+GAYGIVC+A+NSE  E VAIKK
Sbjct:   11 GGGAQIKGMGTHGGRYVLYNVYGNFFEVSSKYAPPIRPIGRGAYGIVCAAVNSENGEEVAIKK 73          

HSP 2 Score: 77.0258 bits (188), Expect = 1.036e-33
Identity = 35/44 (79.55%), Postives = 40/44 (90.91%), Query Frame = 2
Query:  389 KKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPQME 520
            KKI NAFDN IDAKRTLREIKLLRHMDHEN++AI+DII PP+ +
Sbjct:   72 KKIGNAFDNHIDAKRTLREIKLLRHMDHENIIAIKDIIRPPRRD 115          
The following BLAST results are available for this feature:
BLAST of FC932482 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
NTF4_TOBAC5.819e-4895.16Mitogen-activated protein kinase homolog NTF4 OS=N... [more]
MPK6_ARATH4.845e-4771.74Mitogen-activated protein kinase 6 OS=Arabidopsis ... [more]
MMK1_MEDSA8.231e-4791.94Mitogen-activated protein kinase homolog MMK1 OS=M... [more]
MAPK_PEA1.072e-4691.94Mitogen-activated protein kinase homolog D5 OS=Pis... [more]
MPK1_ORYSJ3.637e-4485.71Mitogen-activated protein kinase 1 OS=Oryza sativa... [more]
MPK3_ARATH2.563e-3563.49Mitogen-activated protein kinase 3 OS=Arabidopsis ... [more]
MPK10_ARATH4.687e-3475.86Mitogen-activated protein kinase 10 OS=Arabidopsis... [more]
MPK5_ORYSJ7.958e-3472.73Mitogen-activated protein kinase 5 OS=Oryza sativa... [more]
MPK5_ORYSI7.958e-3472.73Mitogen-activated protein kinase 5 OS=Oryza sativa... [more]
MPK6_ORYSJ1.036e-3361.90Mitogen-activated protein kinase 6 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionC34209A12EF PostHarveN Citrus clementina cDNA clone C34209A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932482 ID=FC932482; Name=FC932482; organism=Citrus clementina; type=EST; length=520bp
GGGACCAAAGAAAATCTTCAATCCTTAACACGAGCACGTAGCATATCACT
GAGCATGATCCCAGCACTCAAGTAACAAGAAGCCCGGATAAAGAAAGCGA
GCGATAAAATGGAAGTTGGGCCCCCGGCGGCGGACACGGAGATGGCGGAG
GCGCAGCCCGACCCACAGCAGACGGCAGCTCCAGCAGCTGCAACTCCAGC
GGCAGGGGGGATCGAGAGCATCCCGGCGACTTTGAGCCACGGAGGGAGGT
TTATATAATATAACATTTTTGGTAACATTTTTGAGGTTACTGCTAAGTAT
AAGCCACCGATCATGCCCATCGGGAAAGGTGCATACGGCATCGTTTGTTC
GGCACTAAACTCGGAGACGAATGAGCACGTGGCGATAAAAAAAGATAGCT
AATGCATTCGATAACAAAATTGATGCAAAGAGGACGCTTCGTGAGATCAA
GTTGCTTCGACACATGGATCATGAAAACGTTGTTGCAATCAGGGATATAA
TACCGCCACCACAAATGGAA
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