FC932494
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932494 vs. ExPASy Swiss-Prot
Match: AB5F_ARATH (ABC transporter F family member 5 OS=Arabidopsis thaliana GN=ABCF5 PE=2 SV=1) HSP 1 Score: 300.827 bits (769), Expect = 3.684e-81 Identity = 156/208 (75.00%), Postives = 168/208 (80.77%), Query Frame = 3 Query: 6 KQSNTGASSISSGVKLENISKSYKGVTVLKDVTWEXXXXXXXXXXXXXXAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKIXXXXXXXXXXXVPTNHLDL 629 K S GAS ISSGVKLENI KSYKGVTVLKDVTWE AGKTTQLRII GQEEPDSGNVIKAK NMK+AFLSQEFEVSMS+TVREEFM+AFKEEMEI KLE+VQKA+E +VDD+DLMGRLLDEFDLLQR+AQAVNLD++DAK+SKLMPELGF +D DRLVASFS GWQMRMSLGKI PTNHLDL Sbjct: 85 KSSKNGASGISSGVKLENIRKSYKGVTVLKDVTWEVKRGEKVGLVGVNGAGKTTQLRIITGQEEPDSGNVIKAKPNMKVAFLSQEFEVSMSKTVREEFMTAFKEEMEITEKLEKVQKAIEGSVDDLDLMGRLLDEFDLLQRRAQAVNLDSVDAKISKLMPELGFAPEDADRLVASFSGGWQMRMSLGKILLQDPDLLLLDEPTNHLDL 292
BLAST of FC932494 vs. ExPASy Swiss-Prot
Match: AB2F_ARATH (ABC transporter F family member 2 OS=Arabidopsis thaliana GN=ABCF2 PE=3 SV=2) HSP 1 Score: 287.73 bits (735), Expect = 3.228e-77 Identity = 148/209 (70.81%), Postives = 168/209 (80.38%), Query Frame = 3 Query: 3 NKQSNTGASSISSGVKLENISKSYKGVTVLKDVTWEXXXXXXXXXXXXXXAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKIXXXXXXXXXXXVPTNHLDL 629 +KQSN GASSISSGV+LENISKSY+G+TVLKDVTWE AGKTTQLRII GQEEPDSGNVI AK N+K+AFLSQEFEVSM +TV+EEFM FKEEMEIA KLE +QKA+E AVDD++LMG+LLDEFDLLQR+AQ V+LD++ AK+SKLM ELGF ++D DRLVASFSSGWQMRMSLGKI PTNHLDL Sbjct: 70 SKQSNNGASSISSGVRLENISKSYEGITVLKDVTWEVKKGEKVGLIGVNGAGKTTQLRIITGQEEPDSGNVIWAKPNLKVAFLSQEFEVSMGKTVKEEFMCTFKEEMEIARKLENLQKAIEEAVDDLELMGKLLDEFDLLQRRAQEVDLDSIHAKISKLMSELGFVSEDADRLVASFSSGWQMRMSLGKILLQNPDLLLLDEPTNHLDL 278
BLAST of FC932494 vs. ExPASy Swiss-Prot
Match: YDIF_BACSU (Uncharacterized ABC transporter ATP-binding protein ydiF OS=Bacillus subtilis GN=ydiF PE=3 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 2.277e-14 Identity = 51/195 (26.15%), Postives = 97/195 (49.74%), Query Frame = 3 Query: 45 VKLENISKSYKGVTVLKDVTWEXXXXXXXXXXXXXXAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKIXXXXXXXXXXXVPTNHLDL 629 +++ +SKS+ T+L ++ E AGK+T L+IIAGQ + G +IK K ++ + +L+Q + T++EE ++ F + ++ +++ + +A D + ++ +D LQ++ + +A V ++ LGF+ D V S S G + R++LGK+ PTNHLD+ Sbjct: 4 LQVNQLSKSFGADTILNNIKLEVRNRDRIAIVGRNGAGKSTLLKIIAGQLSYEKGEIIKPK-DITMGYLAQHTGLDSKLTIKEELLTVFDHLKAMEKEMRAMEEKMAAA--DPGELESIMKTYDRLQQEFKDKGGYQYEADVRSVLHGLGFSHFDDSTQVQSLSGGQKTRLALGKLLLTQPDLLILDEPTNHLDI 195
BLAST of FC932494 vs. ExPASy Swiss-Prot
Match: AB4F_ARATH (ABC transporter F family member 4 OS=Arabidopsis thaliana GN=ABCF4 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.784e-12 Identity = 56/202 (27.72%), Postives = 93/202 (46.04%), Query Frame = 3 Query: 45 VKLENISKSYKGVTVLKDVTWEXXXXXXXXXXXXXXAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESA-------VDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKIXXXXXXXXXXXVPTNHLDL 629 + +E+ S S +G +LK+ + GK+T L+++A ++ P N+ + + QE V ++ +SA +E +++ + E +QK+ A DD D +L + +D LQ + D +A+ SK++ LGFT D R SFS GW+MR+SL + PTNHLDL Sbjct: 163 ITIESFSVSARGKELLKNASVRISHGKRYGLIGPNGMGKSTLLKLLAWRKIP-------VPKNIDVLLVEQEV-VGDEKSALNAVVSANEELVKLREEAEALQKSSSGADGENVDGEDDDDTGEKLAELYDRLQ----ILGSDAAEAQASKILAGLGFTKDMQVRATQSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDL 352 The following BLAST results are available for this feature:
BLAST of FC932494 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932494 ID=FC932494; Name=FC932494; organism=Citrus clementina; type=EST; length=630bpback to top |