FC932568

Overview
NameFC932568
Unique NameFC932568
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC932568 vs. ExPASy Swiss-Prot
Match: PP1R8_MOUSE (Nuclear inhibitor of protein phosphatase 1 OS=Mus musculus GN=Ppp1r8 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.562e-13
Identity = 36/100 (36.00%), Postives = 66/100 (66.00%), Query Frame = 2 
Query:  389 PDWAIEPRSSVYYLEVLKDGEILDRINLDRRRH-IFGRQFQTCDFVLDHQSISRQHAAVIPHKN-GSIYVIDLGSAHGTFVANERLTNETPVELEVGQSL 682
            P WA +P   ++ L+V+K  ++++++ +D +++ +FGR    CDF +DHQS SR HAA++ HK+   +++IDL S HGTF+ + RL    P ++ +  ++
Sbjct:   17 PTWAGKPPPGLH-LDVVKGDKLIEKLIIDEKKYYLFGRNPDLCDFTIDHQSCSRVHAALVYHKHLKRVFLIDLNSTHGTFLGHIRLEPHKPQQIPIDSTV 115
[Close]
BLAST of FC932568 vs. ExPASy Swiss-Prot
Match: PP1R8_HUMAN (Nuclear inhibitor of protein phosphatase 1 OS=Homo sapiens GN=PPP1R8 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.562e-13
Identity = 36/100 (36.00%), Postives = 66/100 (66.00%), Query Frame = 2 
Query:  389 PDWAIEPRSSVYYLEVLKDGEILDRINLDRRRH-IFGRQFQTCDFVLDHQSISRQHAAVIPHKN-GSIYVIDLGSAHGTFVANERLTNETPVELEVGQSL 682
            P WA +P   ++ L+V+K  ++++++ +D +++ +FGR    CDF +DHQS SR HAA++ HK+   +++IDL S HGTF+ + RL    P ++ +  ++
Sbjct:   17 PTWAGKPPPGLH-LDVVKGDKLIEKLIIDEKKYYLFGRNPDLCDFTIDHQSCSRVHAALVYHKHLKRVFLIDLNSTHGTFLGHIRLEPHKPQQIPIDSTV 115
[Close]
BLAST of FC932568 vs. ExPASy Swiss-Prot
Match: PP1R8_BOVIN (Nuclear inhibitor of protein phosphatase 1 OS=Bos taurus GN=PPP1R8 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.562e-13
Identity = 36/100 (36.00%), Postives = 66/100 (66.00%), Query Frame = 2 
Query:  389 PDWAIEPRSSVYYLEVLKDGEILDRINLDRRRH-IFGRQFQTCDFVLDHQSISRQHAAVIPHKN-GSIYVIDLGSAHGTFVANERLTNETPVELEVGQSL 682
            P WA +P   ++ L+V+K  ++++++ +D +++ +FGR    CDF +DHQS SR HAA++ HK+   +++IDL S HGTF+ + RL    P ++ +  ++
Sbjct:   17 PTWAGKPPPGLH-LDVVKGDKLIEKLIIDEKKYYLFGRNPDLCDFTIDHQSCSRVHAALVYHKHLKRVFLIDLNSTHGTFLGHIRLEPHKPQQIPIDSTV 115
The following BLAST results are available for this feature:
BLAST of FC932568 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
PP1R8_MOUSE2.562e-1336.00Nuclear inhibitor of protein phosphatase 1 OS=Mus ... [more]
PP1R8_HUMAN2.562e-1336.00Nuclear inhibitor of protein phosphatase 1 OS=Homo... [more]
PP1R8_BOVIN2.562e-1336.00Nuclear inhibitor of protein phosphatase 1 OS=Bos ... [more]
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Properties
Property NameValue
Genbank descriptionC34210A07EF PostHarveN Citrus clementina cDNA clone C34210A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932568 ID=FC932568; Name=FC932568; organism=Citrus clementina; type=EST; length=733bp
TGGATGGTTACTCCCACTTTTATGAGGAAAGGGGGGAAAACGGTTCACAA
AATAAACCCAACATAAAGGGGGGAAAACGGTTCAGAAAATAAACCCAGCA
TAAGGCTACGTGTAGAGAATGTTCGGAAGAGCCGGTCTTGATCGATTCAA
GAAAGCTCAATCCTTGGGACCATTTTCAGTTGCTGTTAATTCTGCTGCCA
AAACTGCTTCAGAAGCTGTTACTAATCCTTCAACTCAGTGTTTACATTCA
CAAAGTTACCAACAACAACCCCAGTATCAGAATCAACACCAGATTTCTCA
AAACTCCATCAAACAGGAGGCTTCGCTGTCTGTTGGGAAAGCACAGCAGG
TGACCCAGATTGGAGGCGGGCAATCCACTTGGCAACCACCAGACTGGGCA
ATTGAGCCTCGCTCCAGTGTCTACTATCTTGAGGTTTTGAAGGATGGTGA
GATTCTTGACCGGATTAATTTGGATAGACGGAGGCATATTTTTGGGAGGC
AGTTTCAAACGTGTGATTTTGTTCTTGATCATCAGTCCATTTCACGCCAG
CATGCCGCCGTCATTCCTCACAAGAATGGAAGCATATACGTAATTGATCT
GGGATCAGCTCACGGTACCTTTGTTGCCAATGAGCGTTTGACCAATGAGA
CTCCAGTTGAGCTTGAAGTTGGGCAGTCTTTGAGATCGCTGCGTCACAAG
AACATATATTTGAGAAAGATACTGATGCTCTTT
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