FC932587
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932587 vs. ExPASy Swiss-Prot
Match: TIR1B_ORYSJ (Transport inhibitor response 1-like protein Os04g0395600 OS=Oryza sativa subsp. japonica GN=Os04g0395600 PE=2 SV=1) HSP 1 Score: 295.819 bits (756), Expect = 1.515e-79 Identity = 143/225 (63.56%), Postives = 174/225 (77.33%), Query Frame = 3 Query: 9 LKRLWVLDTVEDRGLEAVGSSCPLLEELRVFPADPFDEEITYGVTEAGFLAVSHGCPRLQYVLYFCQAMTNAAVATIVRNCPNFTCFRLCIMNPGQPDYVTNEPMDEAFGAVVRTCTNLQRLSLSGLLTDLTFEYIGQYAKNLELLSVAFAGSSDWGMQCVLRGCPKLRKFEIRDCPFGDAALLSGLDKCESMRSLWMSACNVTMDGCKLLASKKPRLNVEVIKE 683 L+RLWVLD + D+GL+ V SSC L+ELRVFP+D + + VTE G +AVS GCP+L +LYFC MTNAA+ T+ +NCPNFT FRLCI+ PG+PD VT++P+DE FGA+VR C LQRLS+SGLLTD F YIG+YAK LE+LS+AFAG SD GM V+ GC LRK EIRD PFGDAALL + E+MRSLWMS+CNVT+ GC++LASK P LNVEVI E Sbjct: 312 LQRLWVLDCISDKGLQVVASSCKDLQELRVFPSDFYVAGYS-AVTEEGLVAVSLGCPKLNSLLYFCHQMTNAALVTVAKNCPNFTRFRLCILEPGKPDVVTSQPLDEGFGAIVRECKGLQRLSISGLLTDKVFMYIGKYAKQLEMLSIAFAGDSDKGMMHVMNGCKNLRKLEIRDSPFGDAALLGNFARYETMRSLWMSSCNVTLKGCQVLASKMPMLNVEVINE 535
BLAST of FC932587 vs. ExPASy Swiss-Prot
Match: TIR1_ARATH (Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis thaliana GN=TIR1 PE=1 SV=2) HSP 1 Score: 291.967 bits (746), Expect = 2.187e-78 Identity = 143/227 (63.00%), Postives = 170/227 (74.89%), Query Frame = 3 Query: 3 PLLKRLWVLDTVEDRGLEAVGSSCPLLEELRVFPADPFDEEITYGVTEAGFLAVSHGCPRLQYVLYFCQAMTNAAVATIVRNCPNFTCFRLCIMNPGQPDYVTNEPMDEAFGAVVRTCTNLQRLSLSGLLTDLTFEYIGQYAKNLELLSVAFAGSSDWGMQCVLRGCPKLRKFEIRDCPFGDAALLSGLDKCESMRSLWMSACNVTMDGCKLLASKKPRLNVEVIKE 683 P L+RLWVLD +ED GLE + S+C L ELRVFP++PF E +TE G ++VS GCP+L+ VLYFC+ MTNAA+ TI RN PN T FRLCI+ P PDY+T EP+D FGA+V C +L+RLSLSGLLTD FEYIG YAK +E+LSVAFAG SD GM VL GC LRK EIRDCPFGD ALL+ K E+MRSLWMS+C+V+ CKLL K P+LNVEVI E Sbjct: 314 PKLQRLWVLDYIEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSGLLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDE 540
BLAST of FC932587 vs. ExPASy Swiss-Prot
Match: AFB2_ARATH (Protein AUXIN SIGNALING F-BOX 2 OS=Arabidopsis thaliana GN=AFB2 PE=1 SV=1) HSP 1 Score: 287.345 bits (734), Expect = 5.387e-77 Identity = 136/225 (60.44%), Postives = 172/225 (76.44%), Query Frame = 3 Query: 9 LKRLWVLDTVEDRGLEAVGSSCPLLEELRVFPADPFDEEITYGVTEAGFLAVSHGCPRLQYVLYFCQAMTNAAVATIVRNCPNFTCFRLCIMNPGQPDYVTNEPMDEAFGAVVRTCTNLQRLSLSGLLTDLTFEYIGQYAKNLELLSVAFAGSSDWGMQCVLRGCPKLRKFEIRDCPFGDAALLSGLDKCESMRSLWMSACNVTMDGCKLLASKKPRLNVEVIKE 683 L+RLW+LD++ D+GLE V S+C L+ELRVFP+D T VTE G +A+S GCP+L +LYFCQ MTNAA+ T+ +NCPNF FRLCI+ P +PD+VT++P+DE FGA+V+ C +L+RLSLSGLLTD F YIG YA LE+LS+AFAG +D GM VL GC K++K EIRD PFGD ALL+ + K E+MRSLWMS+C VT+ GCK LA K P LNVE+I E Sbjct: 312 LQRLWILDSIGDKGLEVVASTCKELQELRVFPSDLLGGGNT-AVTEEGLVAISAGCPKLHSILYFCQQMTNAALVTVAKNCPNFIRFRLCILEPNKPDHVTSQPLDEGFGAIVKACKSLRRLSLSGLLTDQVFLYIGMYANQLEMLSIAFAGDTDKGMLYVLNGCKKMKKLEIRDSPFGDTALLADVSKYETMRSLWMSSCEVTLSGCKRLAEKAPWLNVEIINE 535
BLAST of FC932587 vs. ExPASy Swiss-Prot
Match: AFB3_ARATH (Protein AUXIN SIGNALING F-BOX 3 OS=Arabidopsis thaliana GN=AFB3 PE=1 SV=1) HSP 1 Score: 276.174 bits (705), Expect = 1.242e-73 Identity = 130/226 (57.52%), Postives = 170/226 (75.22%), Query Frame = 3 Query: 9 LKRLWVLDTVEDRGLEAVGSSCPLLEELRVFPADPFDEEITYG-VTEAGFLAVSHGCPRLQYVLYFCQAMTNAAVATIVRNCPNFTCFRLCIMNPGQPDYVTNEPMDEAFGAVVRTCTNLQRLSLSGLLTDLTFEYIGQYAKNLELLSVAFAGSSDWGMQCVLRGCPKLRKFEIRDCPFGDAALLSGLDKCESMRSLWMSACNVTMDGCKLLASKKPRLNVEVIKE 683 L+RLW+LD++ D+GL V ++C L+ELRVFP+D EE VTE G +A+S GCP+L +LYFC+ MTNAA+ + +NCPNF FRLCI+ P +PD++T + +DE FGA+V+ C L+RLS+SGLLTD F YIG YA+ LE+LS+AFAG +D GM VL GC K+RK EIRD PFG+AALL+ + + E+MRSLWMS+C VT+ GCK LA PRLNVE+I E Sbjct: 312 LQRLWILDSIGDKGLAVVAATCKELQELRVFPSDVHGEEDNNASVTEVGLVAISAGCPKLHSILYFCKQMTNAALIAVAKNCPNFIRFRLCILEPHKPDHITFQSLDEGFGAIVQACKGLRRLSVSGLLTDQVFLYIGMYAEQLEMLSIAFAGDTDKGMLYVLNGCKKMRKLEIRDSPFGNAALLADVGRYETMRSLWMSSCEVTLGGCKRLAQNSPRLNVEIINE 537
BLAST of FC932587 vs. ExPASy Swiss-Prot
Match: TIR1A_ORYSJ (Transport inhibitor response 1-like protein Os05g0150500 OS=Oryza sativa subsp. japonica GN=Os05g0150500 PE=2 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 3.059e-72 Identity = 128/226 (56.64%), Postives = 165/226 (73.01%), Query Frame = 3 Query: 9 LKRLWVLDTVEDRGLEAVGSSCPLLEELRVFPADPFDEEITYGVTEAGFLAVSHGCPRLQYVLYFCQAMTNAAVATIVRNCPNFTCFRLCIMNPGQPDYVTNEPMDEAFGAVVRTCTNLQRLSLSGLLTDLTFEYIGQYAKNLELLSVAFAGSSDWGMQCVLRGCPKLRKFEIRDCPFGDAALLSGLDKCESMRSLWMSACNVTMDGCKLLASKKPRLNVEVIKEP 686 L++LWV+D +ED GL V SSC L+ELRVFP+DPF +TE G + VS CP L+ VLYFC+ MTN A+ TI +N PNFTCFRLCI+ P PDY+T EP+D F A+V +C L+RLS+SGLLTDL F+ IG +A LE+LS+AFAG+SD G+ +L GC L+K EIRDCPFGD LL+ K E+MRSLWMS+C +T+ C+ LA K PRL+VE++ +P Sbjct: 330 LQQLWVMDLIEDHGLAVVASSCNKLQELRVFPSDPFGAGF---LTERGLVDVSASCPMLESVLYFCRRMTNEALITIAKNRPNFTCFRLCILEPHTPDYITREPLDAGFSAIVESCRGLRRLSISGLLTDLVFKSIGAHADRLEMLSIAFAGNSDLGLHYILSGCKSLKKLEIRDCPFGDKPLLANAAKLETMRSLWMSSCLLTLGACRQLARKMPRLSVEIMNDP 552
BLAST of FC932587 vs. ExPASy Swiss-Prot
Match: TIRC_ORYSJ (Transport inhibitor response 1-like protein Os11g0515500 OS=Oryza sativa subsp. japonica GN=Os11g0515500 PE=2 SV=1) HSP 1 Score: 270.011 bits (689), Expect = 8.900e-72 Identity = 130/223 (58.30%), Postives = 168/223 (75.34%), Query Frame = 3 Query: 9 LKRLWVLDTVEDRGLEAVGSSCPLLEELRVFPADPFDEEITYGVTEAGFLAVSHGCPRLQYVLYFCQAMTNAAVATIVRNCPNFTCFRLCIMNPGQPDYVTNEPMDEAFGAVVRTCTNLQRLSLSGLLTDLTFEYIGQYAKNLELLSVAFAGSSDWGMQCVLRGCPKLRKFEIRDCPFGDAALLSGLDKCESMRSLWMSACNVTMDGCKLLASKKPRLNVEVI 677 L++LWVLD + D GL+ V SSC L+ELRVFPA+ T VTE G +A+S GC +LQ VLYFCQ MTN+A+ T+ +NCP FT FRLC+++PG D VT +P+DE +GA+V++C L+RL LSGLLTD F YIG YA+ LE+LSVAFAG +D GM VL GC L+K EIRD PFGD+ALL+G+ + E+MRSLW+S+CNVT+ GCK LA+ LN+EV+ Sbjct: 307 LQQLWVLDHIGDEGLKIVASSCIQLQELRVFPANANARAST--VTEEGLVAISAGCNKLQSVLYFCQRMTNSALITVAKNCPRFTSFRLCVLDPGSADAVTGQPLDEGYGAIVQSCKGLRRLCLSGLLTDTVFLYIGMYAERLEMLSVAFAGDTDDGMTYVLNGCKNLKKLEIRDSPFGDSALLAGMHQYEAMRSLWLSSCNVTLGGCKSLAASMANLNIEVM 527
BLAST of FC932587 vs. ExPASy Swiss-Prot
Match: GRH1_ARATH (GRR1-like protein 1 OS=Arabidopsis thaliana GN=GRH1 PE=1 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 4.134e-69 Identity = 126/225 (56.00%), Postives = 161/225 (71.56%), Query Frame = 3 Query: 9 LKRLWVLDTVEDRGLEAVGSSCPLLEELRVFPADPFDEEITYGVTEAGFLAVSHGCPRLQYVLYFCQAMTNAAVATIVRNCPNFTCFRLCIMNPGQPDYVTNEPMDEAFGAVVRTCTNLQRLSLSGLLTDLTFEYIGQYAKNLELLSVAFAGSSDWGMQCVLRGCPKLRKFEIRDCPFGDAALLSGLDKCESMRSLWMSACNVTMDGCKLLASKKPRLNVEVIKE 683 L++LWV+D +ED+GLEAV S C L ELRVFP++P + +TE G + VS GC +L+ VLYFC TNAA+ TI R PN CFRLC++ P PDY TNEP+D+ F A+ C +L+RLS+SGLL+D F+YIG++AK + +LS+AFAG SD + +L GC L+K EIRDCPFGD ALL K E+MRSLWMS+C V+ CKLL+ K PRLNVEVI E Sbjct: 312 LQKLWVMDLIEDKGLEAVASYCKELRELRVFPSEPDLDATNIPLTEQGLVFVSKGCRKLESVLYFCVQFTNAALFTIARKRPNLKCFRLCVIEPFAPDYKTNEPLDKGFKAIAEGCRDLRRLSVSGLLSDKAFKYIGKHAKKVRMLSIAFAGDSDLMLHHLLSGCESLKKLEIRDCPFGDTALLEHAAKLETMRSLWMSSCFVSFGACKLLSQKMPRLNVEVIDE 536
BLAST of FC932587 vs. ExPASy Swiss-Prot
Match: TIR1L_ARATH (Transport inhibitor response 1-like protein OS=Arabidopsis thaliana GN=At5g49980 PE=1 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 1.522e-63 Identity = 119/223 (53.36%), Postives = 155/223 (69.51%), Query Frame = 3 Query: 9 LKRLWVLDTVEDRGLEAVGSSCPLLEELRVFPADPFDEEITYGVTEAGFLAVSHGCPRLQYVLYFCQAMTNAAVATIVRNCPNFTCFRLCIMNPGQPDYVTNEPMDEAFGAVVRTCTNLQRLSLSGLLTDLTFEYIGQYAKNLELLSVAFAGSSDWGMQCVLRGCPKLRKFEIRDCPFGDAALLSGLDKCESMRSLWMSACNVTMDGCKLLASKKPRLNVEVI 677 L+ W LD++ D GL+AV ++C L ELR+FP DP E+ V+E G A+S GC +L+ +LYFCQ MTNAAV + NCP T FRLCIM +PD+VT +PMDE FGA+V+ C L RL++SGLLTD F Y+G+Y K + LSVAFAG SD ++ VL GCP+L+K EIRD PFGD AL SG+ + +MR +WMSAC+++ CK +A P L VEVI Sbjct: 363 LQVFWALDSICDEGLQAVAATCKELRELRIFPFDP-REDSEGPVSELGLQAISEGCRKLESILYFCQRMTNAAVIAMSENCPELTVFRLCIMGRHRPDHVTGKPMDEGFGAIVKNCKKLTRLAVSGLLTDQAFRYMGEYGKLVRTLSVAFAGDSDMALRHVLEGCPRLQKLEIRDSPFGDVALRSGMHRYYNMRFVWMSACSLSKGCCKDIARAMPNLVVEVI 584
BLAST of FC932587 vs. ExPASy Swiss-Prot
Match: FBX14_ARATH (F-box protein FBX14 OS=Arabidopsis thaliana GN=FBX14 PE=1 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 3.173e-61 Identity = 111/222 (50.00%), Postives = 152/222 (68.47%), Query Frame = 3 Query: 9 LKRLWVLDTVEDRGLEAVGSSCPLLEELRVFPADPFDEEITYGVTEAGFLAVSHGCPRLQYVLYFCQAMTNAAVATIVRNCPNFTCFRLCIMNPGQPDYVTNEPMDEAFGAVVRTCTNLQRLSLSGLLTDLTFEYIGQYAKNLELLSVAFAGSSDWGMQCVLRGCPKLRKFEIRDCPFGDAALLSGLDKCESMRSLWMSACNVTMDGCKLLASKKPRLNVEV 674 ++ W LD++ D GL+AV ++C L ELR+FP DP E+ V+ G A+S GC +L+ +LYFCQ MTN AV + NCP T FRLCIM +PD+VT +PMD+ FGA+V+ C L RL++SGLLTD F YIG+Y K + LSVAFAG+SD ++ VL GCPKL+K EIRD PFGD L SG+ + +MR +W+S+C ++ GC+ ++ P + VEV Sbjct: 363 IRVFWALDSIRDEGLQAVAATCKELRELRIFPFDP-REDSEGPVSGVGLQAISEGCRKLESILYFCQNMTNGAVTAMSENCPQLTVFRLCIMGRHRPDHVTGKPMDDGFGAIVKNCKKLTRLAVSGLLTDEAFSYIGEYGKLIRTLSVAFAGNSDKALRYVLEGCPKLQKLEIRDSPFGDVGLRSGMHRYSNMRFVWLSSCLISRGGCRGVSHALPNVVVEV 583
BLAST of FC932587 vs. ExPASy Swiss-Prot
Match: COI1_ARATH (Coronatine-insensitive protein 1 OS=Arabidopsis thaliana GN=COI1 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.452e-29 Identity = 77/241 (31.95%), Postives = 129/241 (53.53%), Query Frame = 3 Query: 3 PLLKRLWVLDTVEDRGLEAVGSSCPLLEELRVFP-ADPFDEEITYG-VTEAGFLAVSHGCPRLQYVLYFCQAMTNAAVATIVRNCPNFTCFRLCIMNPGQPDYVTNEPMDEAFGAVVRTCTNLQRLSL---SGLLTDLTFEYIGQYAKNLELLSVAFAGSSDWGMQCVLRGCPKLRKFEIRDCPFGDAALLSGLDKCESMRSLWMSACNVTMDGCKLLASKKPRLNVEVIKEPRVMTIS*Q 710 P L+ L + + DRGLE + C L+ LR+ AD E G V++ G +A++ GC L+Y+ + +TN ++ +I N FRL +++ + + +T+ P+D +++ C L+R + G LTDL YIGQY+ N+ + + + G SD G+ RGCP L+K E+R C F + A+ + + K S+R LW+ +M G L+ +P N+E+I RV ++ Q Sbjct: 318 PNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLD--REERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSRRVPEVNQQ 556 The following BLAST results are available for this feature:
BLAST of FC932587 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932587 ID=FC932587; Name=FC932587; organism=Citrus clementina; type=EST; length=721bpback to top |