FC932588
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932588 vs. ExPASy Swiss-Prot
Match: Y3550_ARATH (REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana GN=At3g05500 PE=2 SV=1) HSP 1 Score: 250.366 bits (638), Expect = 3.504e-66 Identity = 125/186 (67.20%), Postives = 151/186 (81.18%), Query Frame = 3 Query: 123 NMDIEEEQRLKYLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTKYEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFXXXXXXXXXXXXYCSE 680 +M EE++RLKYL+FVQ A + LL F +Y AK KSGPLKPGVESVEG VK VVGPVY+KYH +P+E+LK++D+KVD SVT+LD RVPPV+KQV AQA+SAAQ+AP+VAR++ASEV+ AGV TASGMAKSVY+KYEPAAKELY+ YEPKAEQ AVSAW+KLNQ+PLF +CSE Sbjct: 13 DMTKEEKERLKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESVEGAVKTVVGPVYEKYHDVPVEVLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAPIVARALASEVRRAGVVETASGMAKSVYSKYEPAAKELYANYEPKAEQCAVSAWKKLNQLPLFPRLAQVAVPTAAFCSE 198 HSP 2 Score: 23.0978 bits (48), Expect = 3.504e-66 Identity = 9/15 (60.00%), Postives = 12/15 (80.00%), Query Frame = 1 Query: 679 KIHQTVVSAADKGYK 723 K + TVV AA+KGY+ Sbjct: 199 KYNDTVVKAAEKGYR 213
BLAST of FC932588 vs. ExPASy Swiss-Prot
Match: SRP_VITRI (Stress-related protein OS=Vitis riparia GN=SRP PE=2 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 3.129e-54 Identity = 104/181 (57.46%), Postives = 135/181 (74.59%), Query Frame = 3 Query: 138 EEQRLKYLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTKYEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFXXXXXXXXXXXXYCSE 680 EE+RLKYL+FVQVA I+V++CF +LY YAK SGPLKPGV++VEGTVK V+GPVY+K++ +P ELL F+DRKV+ S+ +L+ VP ++K+ QA++ AQ AP +A +VASEV+ GV TA + K+VY+K EP AKEL SKYEP AEQYAVSAWR LN++PLF Y SE Sbjct: 16 EEKRLKYLDFVQVAAIYVIVCFSSLYEYAKENSGPLKPGVQTVEGTVKTVIGPVYEKFYDVPFELLMFVDRKVEASIYELERHVPSLVKRASCQAITVAQKAPELALAVASEVQRPGVVDTAKNITKNVYSKCEPTAKELCSKYEPVAEQYAVSAWRSLNRLPLFPQVAQVVVPTAAYWSE 196
BLAST of FC932588 vs. ExPASy Swiss-Prot
Match: Y5513_ORYSJ (REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 OS=Oryza sativa subsp. japonica GN=Os05g0151300 PE=2 SV=2) HSP 1 Score: 184.882 bits (468), Expect = 4.097e-46 Identity = 95/180 (52.78%), Postives = 129/180 (71.67%), Query Frame = 3 Query: 99 EKNVPSQQNMDIE---EEQRLKYLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTKYEPAAKELYSKYEPKAEQYAVSAWRKLNQMPL 629 E+ V ++ ++E EE+RL+YLEFVQ A VL+ Y YAK +GPL+PGV+ VEGTVK VVGPVYD++HG+P++LLKF+DRKV ESV +LD RVPPV+K+ AP +ARS A+EV+ AG+ GTA+G+AKS + EP A++LY++YEP AE+ A AW LN++PL Sbjct: 15 EEEVTVEKTPEMEAAAEEERLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPVYDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVKE-----------APGLARSAAAEVRQAGLVGTATGLAKSAIARAEPRARDLYTRYEPVAERKAAEAWAALNRLPL 183
BLAST of FC932588 vs. ExPASy Swiss-Prot
Match: Y5513_ORYSI (REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica GN=OsI_017815 PE=2 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 4.097e-46 Identity = 95/180 (52.78%), Postives = 129/180 (71.67%), Query Frame = 3 Query: 99 EKNVPSQQNMDIE---EEQRLKYLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTKYEPAAKELYSKYEPKAEQYAVSAWRKLNQMPL 629 E+ V ++ ++E EE+RL+YLEFVQ A VL+ Y YAK +GPL+PGV+ VEGTVK VVGPVYD++HG+P++LLKF+DRKV ESV +LD RVPPV+K+ AP +ARS A+EV+ AG+ GTA+G+AKS + EP A++LY++YEP AE+ A AW LN++PL Sbjct: 15 EEEVTVEKTPEMEAAAEEERLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPVYDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVKE-----------APGLARSAAAEVRQAGLVGTATGLAKSAIARAEPRARDLYTRYEPVAERKAAEAWAALNRLPL 183
BLAST of FC932588 vs. ExPASy Swiss-Prot
Match: SRPP_HEVBR (Small rubber particle protein OS=Hevea brasiliensis GN=SRPP PE=1 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 5.550e-35 Identity = 86/181 (47.51%), Postives = 106/181 (58.56%), Query Frame = 3 Query: 138 EEQRLKYLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTKYEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFXXXXXXXXXXXXYCSE 680 EE+RLKYL+FV+ A ++ + F LY YAK SGPLKPGV+++E VK VV PVY +P+E +KF+D+ VD SVT LD VPPV+KQV AQ S AQ AP + VAS V GV + AK LY+ EPKAEQYAV WR LN++PL Y SE Sbjct: 6 EEERLKYLDFVRAAGVYAVDSFSTLYLYAKDISGPLKPGVDTIENVVKTVVTPVYY----IPLEAVKFVDKTVDVSVTSLDGVVPPVIKQVSAQTYSVAQDAPRIVLDVASSVFNTGV---------------QEGAKALYANLEPKAEQYAVITWRALNKLPLVPQVANVVVPTAVYFSE 167
BLAST of FC932588 vs. ExPASy Swiss-Prot
Match: Y2778_ARATH (REF/SRPP-like protein At2g47780 OS=Arabidopsis thaliana GN=At2g47780 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.367e-32 Identity = 75/182 (41.21%), Postives = 106/182 (58.24%), Query Frame = 3 Query: 135 EEEQRLKYLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTKYEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFXXXXXXXXXXXXYCSE 680 ++E +LK+LEF+QVA ++ CF LY AK +GPLK GVE++E V+ V+ P+Y+K+H +P +LL F+DRKVD+ ++ VP ++KQ +QAL +VA+EV+ GV T +A+SV KYEPA AE YA + WR LNQ+PLF Y SE Sbjct: 36 DDEMKLKHLEFIQVAAVYFAACFSTLYELAKDNAGPLKLGVENIEDCVRTVLAPLYEKFHDVPFKLLLFVDRKVDDVFFDVETYVPSLVKQASSQAL-----------TVATEVQRTGVVDTTKSIARSVRDKYEPA-----------AEYYAATLWRLLNQLPLFPEVAHLVIPTAFYWSE 195
BLAST of FC932588 vs. ExPASy Swiss-Prot
Match: SRP_PHAVU (Stress-related protein OS=Phaseolus vulgaris GN=SRP PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.484e-29 Identity = 76/157 (48.41%), Postives = 92/157 (58.60%), Query Frame = 3 Query: 210 LYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTKYEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFXXXXXXXXXXXXYCSE 680 LY YAK ++GPLKPGV +VE VK VV PVYD++H +P+ELLK+ DRKV E LD VP +K+V +Q ARSV SEV+ GV+ AK +YSKYEP AEQ AVSAWRKLNQ+PLF YC+E Sbjct: 6 LYSYAKERAGPLKPGVNTVEDAVKTVVAPVYDRFHLVPVELLKYADRKVGE----LDRHVPSNVKKVSSQ-----------ARSVVSEVRRDGVS---------------TFAKTVYSKYEPTAEQCAVSAWRKLNQLPLFPQVANAVLPKAAYCTE 132
BLAST of FC932588 vs. ExPASy Swiss-Prot
Match: REF_HEVBR (Rubber elongation factor protein OS=Hevea brasiliensis PE=1 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.568e-21 Identity = 57/129 (44.19%), Postives = 84/129 (65.12%), Query Frame = 3 Query: 90 MAEEKNVPSQQNMDIEEEQRLKYLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEV 476 MAE+++ +QQ + + LKYL FVQ A + + F N+Y +AK KSGPL+PGV+ +EG VKNV P+Y+++ +P LKF+D V SVT +D +PP++K Q +SA + AP ARS+AS + Sbjct: 1 MAEDED--NQQG----QGEGLKYLGFVQDAATYAVTTFSNVYLFAKDKSGPLQPGVDIIEGPVKNVAVPLYNRFSYIPNGALKFVDSTVVASVTIIDRSLPPIVKDASIQVVSAIRAAPEAARSLASSL 123
BLAST of FC932588 vs. ExPASy Swiss-Prot
Match: Y1736_ARATH (REF/SRPP-like protein At1g67360 OS=Arabidopsis thaliana GN=At1g67360 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.047e-21 Identity = 67/163 (41.10%), Postives = 81/163 (49.69%), Query Frame = 3 Query: 138 EEQRLKYLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTKYEPAAKELYSKYEPK--AEQYAVSAWRKLNQ 620 +E LK+L FV++ATIH+L NLY YAK SGPLK VE VEG V VV PVY K+ +P LL F+D KV E K D PP+ K+V QA A A+S E +T G P A Y+ E K +V W KLNQ Sbjct: 9 KEVALKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVTPVYQKFKDVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKEARTGG-----------------PKAAFNYAATEYKFFVVTNSVKVWAKLNQ 154 The following BLAST results are available for this feature:
BLAST of FC932588 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932588 ID=FC932588; Name=FC932588; organism=Citrus clementina; type=EST; length=753bpback to top |