FC932593

Overview
NameFC932593
Unique NameFC932593
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932593 vs. ExPASy Swiss-Prot
Match: G3P_PARBA (Glyceraldehyde-3-phosphate dehydrogenase OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=GPD PE=1 SV=1)

HSP 1 Score: 328.946 bits (842), Expect = 1.602e-89
Identity = 159/232 (68.53%), Postives = 185/232 (79.74%), Query Frame = 2
Query:    2 VGINGFGRIGRLVLRVAAFRDNVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVYEEFGILEGLMXXXXXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVP 697
            VGINGFGRIGR+V R A   D+V++VAVNDPFI+ KY AYM KYDSTHG FKG I     + L +N K I  + +RDPA IPWG +GVDYVVES+GVFTT  KA AH+ GGAKKV+ISAPSADAPMFV+GVNEK+Y+P+++++SNASCTTNCLAPLAKV+++ FGI EGLM             DGPS KDWRGGR A+QNIIPSSTGAAKAVGKV+P LNGKLTGMA RVP
Sbjct:    5 VGINGFGRIGRIVFRNAVEHDDVEIVAVNDPFIETKYAAYMLKYDSTHGQFKGDIQHSSSNNLTVNNKTIHFYQERDPANIPWGKHGVDYVVESTGVFTTTEKAKAHLSGGAKKVIISAPSADAPMFVMGVNEKSYRPDISVLSNASCTTNCLAPLAKVIHDNFGIAEGLMTTIHSYTATQKTVDGPSHKDWRGGRTAAQNIIPSSTGAAKAVGKVIPALNGKLTGMAMRVP 236          
BLAST of FC932593 vs. ExPASy Swiss-Prot
Match: G3P_PODAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Podospora anserina GN=GPD PE=3 SV=1)

HSP 1 Score: 328.561 bits (841), Expect = 2.092e-89
Identity = 161/232 (69.40%), Postives = 188/232 (81.03%), Query Frame = 2
Query:    2 VGINGFGRIGRLVLRVAAFRDNVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVYEEFGILEGLMXXXXXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVP 697
            VGINGFGRIGR+V R A    +V++VAVNDPFI+ KY  YM KYDSTHGVFKGTI V   S L +NGK +K +++RDP+ IPW D G +Y+VES+GVFTT  KASAH+KGGAK+V+ISAPSADAPM+V+GVNEKTY     ++SNASCTTNCLAPLAKVV ++FGI+EGLM             DGPS KDWRGGRGA+QNIIPSSTGAAKAVGKV+P+LNGKLTGMAFRVP
Sbjct:    5 VGINGFGRIGRIVFRNAVEHPDVEIVAVNDPFIEPKYAEYMLKYDSTHGVFKGTIQV-SGSDLIVNGKTVKFYTERDPSAIPWKDTGAEYIVESTGVFTTTEKASAHLKGGAKRVIISAPSADAPMYVMGVNEKTYDGKAAVISNASCTTNCLAPLAKVVNDKFGIVEGLMTTVHSYTATQKTVDGPSAKDWRGGRGAAQNIIPSSTGAAKAVGKVIPELNGKLTGMAFRVP 235          
BLAST of FC932593 vs. ExPASy Swiss-Prot
Match: G3P_CRYCU (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryptococcus curvatus GN=GPD PE=3 SV=1)

HSP 1 Score: 328.561 bits (841), Expect = 2.092e-89
Identity = 162/232 (69.83%), Postives = 182/232 (78.45%), Query Frame = 2
Query:    2 VGINGFGRIGRLVLRVAAFRDNVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVYEEFGILEGLMXXXXXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVP 697
            VGINGFGRIGR+VLR A    ++DVVA+NDPFID  YM YMFKYDSTHG FKG +    D  L I GK I VF +RDPA IPWG  G DYVVES+GVFTTI KAS H+KGGAKKV+ISAPSADAPMFV GVN + YKP   ++SNASCTTNCLAPLAKV+++ FGI+EGLM             DGPS KDWRGGRGA+ NIIPSSTGAAKAVGKV+P LNGKLTGM+FR+P
Sbjct:    5 VGINGFGRIGRIVLRNALEHGDIDVVAINDPFIDLDYMVYMFKYDSTHGRFKGKVET-KDGKLVIEGKPISVFGERDPAAIPWGKAGADYVVESTGVFTTIEKASLHLKGGAKKVIISAPSADAPMFVCGVNLEAYKPEYEVISNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHATTATQKTVDGPSHKDWRGGRGAAANIIPSSTGAAKAVGKVIPSLNGKLTGMSFRIP 235          
BLAST of FC932593 vs. ExPASy Swiss-Prot
Match: G3P_AJECA (Glyceraldehyde-3-phosphate dehydrogenase OS=Ajellomyces capsulata GN=GPD PE=2 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 2.732e-89
Identity = 161/232 (69.40%), Postives = 187/232 (80.60%), Query Frame = 2
Query:    2 VGINGFGRIGRLVLRVAAFRDNVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVYEEFGILEGLMXXXXXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVP 697
            VGINGFGRIGR+V R A     V+VVAVNDPFI+  Y AYM KYDSTHG FKGTI+V + + L +NGK +  + +RDPA IPWG +GV+YVVES+GVFTT  KASAH+KGGAKKV+ISAPSADAPMFV+GVNEKTY P++N++SNASCTTNCLAPLAKV+ + FG+ EGLM             DGPS KDWRGGR A+QNIIPSSTGAAKAVGKV+P LNGKLTGM+ RVP
Sbjct:    5 VGINGFGRIGRIVFRNAIEHGEVNVVAVNDPFIETHYAAYMLKYDSTHGQFKGTIDV-NSNGLTVNGKAVTFYQERDPASIPWGKHGVEYVVESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMFVMGVNEKTYDPSVNVLSNASCTTNCLAPLAKVINDNFGLTEGLMTTIHSYTATQKTVDGPSSKDWRGGRTAAQNIIPSSTGAAKAVGKVIPSLNGKLTGMSMRVP 235          
BLAST of FC932593 vs. ExPASy Swiss-Prot
Match: G3PC_CRAPL (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Craterostigma plantagineum GN=GAPC PE=2 SV=1)

HSP 1 Score: 323.553 bits (828), Expect = 6.729e-88
Identity = 161/233 (69.10%), Postives = 185/233 (79.40%), Query Frame = 2
Query:    2 VGINGFGRIGRLVLRVAAFRDNVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKG-TINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVYEEFGILEGLMXXXXXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVP 697
            +GINGFGRIGRLV RVA  RD+V++VAVNDPFI   YMAYMFKYD+ HG +K   + V D+ TL    K + VF  R+P EIPW + G +YVVES+GVFT   KA+AH+KGGAKKV+ISAPS DAPMFVVGVNEKTY P++++VSNASCTTNCLAPLAKV+++ FGI+EGLM             DGPS KDWRGGR AS NIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVP
Sbjct:    6 IGINGFGRIGRLVARVALVRDDVELVAVNDPFITVDYMAYMFKYDTVHGQYKHHELKVKDEKTLLFGDKPVAVFGLRNPEEIPWAETGAEYVVESTGVFTEKEKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEKTYTPDIDVVSNASCTTNCLAPLAKVIHDRFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVP 238          
BLAST of FC932593 vs. ExPASy Swiss-Prot
Match: G3P_NEUCR (Glyceraldehyde 3-phosphate-dehydrogenase OS=Neurospora crassa GN=gpd-1 PE=2 SV=2)

HSP 1 Score: 322.398 bits (825), Expect = 1.499e-87
Identity = 156/232 (67.24%), Postives = 187/232 (80.60%), Query Frame = 2
Query:    2 VGINGFGRIGRLVLRVAAFRDNVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVYEEFGILEGLMXXXXXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVP 697
            VGINGFGRIGR+V R A   D++ +VAVNDPFI+ KY AYM +YD+THG FKGTI V D + L +NGK +K +++RDPA IPW + G DY+VES+GVFTT  KASAH+KGGAKKV+ISAPSADAPM+V+GVN +TY  + +++SNASCTTNCLAPLAKV+++ F I+EGLM             DGPS KDWRGGR A+QNIIPSSTGAAKAVGKV+PDLNGKLTGMA RVP
Sbjct:    5 VGINGFGRIGRIVFRNAIEHDDIHIVAVNDPFIEPKYAAYMLRYDTTHGNFKGTIEV-DGADLVVNGKKVKFYTERDPAAIPWSETGADYIVESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMYVMGVNNETYDGSADVISNASCTTNCLAPLAKVIHDNFTIVEGLMTTVHSYTATQKTVDGPSAKDWRGGRTAAQNIIPSSTGAAKAVGKVIPDLNGKLTGMAMRVP 235          
BLAST of FC932593 vs. ExPASy Swiss-Prot
Match: G3PC_GRAVE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Gracilaria verrucosa GN=GAPC PE=3 SV=1)

HSP 1 Score: 321.627 bits (823), Expect = 2.557e-87
Identity = 157/232 (67.67%), Postives = 180/232 (77.59%), Query Frame = 2
Query:    2 VGINGFGRIGRLVLRVAAFRDNVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVYEEFGILEGLMXXXXXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVP 697
            VGINGFGRIGRLVLR A  +D + VVA+NDPFID +YMAYMFK+DSTHG + G++    D  L +NGK I ++  RDPAEIPW + G DYVVES+GVFT   KA  H  GGAKKV+ISAPS DAPMFV GVNE  Y P++N++SNASCTTNCLAPL KV++E++GI EGLM             DGPS KDWRGGRGA  NIIPSSTGAAKAVGKVLP+LNGKLTGMAFRVP
Sbjct:    6 VGINGFGRIGRLVLRAAIEKDTMSVVAINDPFIDLEYMAYMFKFDSTHGRYAGSVET-KDGKLIVNGKSITIYGHRDPAEIPWAEAGADYVVESTGVFTLKEKAEKHFTGGAKKVIISAPSKDAPMFVCGVNEDKYTPDLNVISNASCTTNCLAPLVKVIHEKYGIEEGLMTTVHATTATQKTVDGPSQKDWRGGRGAGANIIPSSTGAAKAVGKVLPELNGKLTGMAFRVP 236          
BLAST of FC932593 vs. ExPASy Swiss-Prot
Match: G3P_RAT (Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus GN=Gapdh PE=1 SV=3)

HSP 1 Score: 320.857 bits (821), Expect = 4.361e-87
Identity = 157/232 (67.67%), Postives = 184/232 (79.31%), Query Frame = 2
Query:    2 VGINGFGRIGRLVLRVAAFRDNVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVYEEFGILEGLMXXXXXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVP 697
            VG+NGFGRIGRLV R A   D VD+VA+NDPFID  YM YMF+YDSTHG F GT+   ++  L INGK I +F +RDPA I WGD G +YVVES+GVFTT+ KA AH+KGGAK+V+ISAPSADAPMFV+GVN + Y  ++ IVSNASCTTNCLAPLAKV+++ FGI+EGLM             DGPS K WR GRGA+QNIIP+STGAAKAVGKV+P+LNGKLTGMAFRVP
Sbjct:    4 VGVNGFGRIGRLVTRAAFSCDKVDIVAINDPFIDLNYMVYMFQYDSTHGKFNGTVKA-ENGKLVINGKPITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVP 234          
BLAST of FC932593 vs. ExPASy Swiss-Prot
Match: G3P_CRIGR (Glyceraldehyde-3-phosphate dehydrogenase OS=Cricetulus griseus GN=GAPDH PE=2 SV=2)

HSP 1 Score: 320.472 bits (820), Expect = 5.696e-87
Identity = 157/232 (67.67%), Postives = 184/232 (79.31%), Query Frame = 2
Query:    2 VGINGFGRIGRLVLRVAAFRDNVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVYEEFGILEGLMXXXXXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVP 697
            VG+NGFGRIGRLV R A     V+VVA+NDPFID  YM YMF+YDSTHG FKGT+   ++  L INGK I +F +RDPA I WGD G +YVVES+GVFTT+ KA AH+KGGAK+V+ISAPSADAPMFV+GVN+  Y  ++ IVSNASCTTNCLAPLAKV+++ FGI+EGLM             DGPS K WR GRGA+QNIIP+STGAAKAVGKV+P+LNGKLTGMAFRVP
Sbjct:    4 VGVNGFGRIGRLVTRAAFTSGKVEVVAINDPFIDLNYMVYMFQYDSTHGKFKGTVKA-ENGKLVINGKAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNQDKYDNSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVP 234          
BLAST of FC932593 vs. ExPASy Swiss-Prot
Match: G3P_CRYNE (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryptococcus neoformans GN=GPD PE=3 SV=2)

HSP 1 Score: 320.087 bits (819), Expect = 7.439e-87
Identity = 161/232 (69.40%), Postives = 180/232 (77.59%), Query Frame = 2
Query:    2 VGINGFGRIGRLVLRVAAFRDNVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVYEEFGILEGLMXXXXXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVP 697
            VGINGFGRIGR+VLR A    +++VVAVNDPFID  YM YMFKYDSTHG FKG++ V  D  L IN K I VF ++DPA I WG+ G +YVVES+GVFTT  KA  H+KGGAKKVVISAPSADAPMFV GVN   YKP   IVSNASCTTNCLAPLAKV+++ F I+EGLM             DGPS KDWRGGRGA+ NIIPSSTGAAKAVGKV+P LNGKLTGM+FRVP
Sbjct:    5 VGINGFGRIGRIVLRNAIEHGDLEVVAVNDPFIDLDYMVYMFKYDSTHGRFKGSVEV-KDGKLYINNKAIAVFGEKDPANIKWGEAGAEYVVESTGVFTTTEKAGVHLKGGAKKVVISAPSADAPMFVCGVNLDAYKPEYQIVSNASCTTNCLAPLAKVIHDNFTIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGAAANIIPSSTGAAKAVGKVIPSLNGKLTGMSFRVP 235          
The following BLAST results are available for this feature:
BLAST of FC932593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 349
Match NameE-valueIdentityDescription
G3P_PARBA1.602e-8968.53Glyceraldehyde-3-phosphate dehydrogenase OS=Paraco... [more]
G3P_PODAN2.092e-8969.40Glyceraldehyde-3-phosphate dehydrogenase OS=Podosp... [more]
G3P_CRYCU2.092e-8969.83Glyceraldehyde-3-phosphate dehydrogenase OS=Crypto... [more]
G3P_AJECA2.732e-8969.40Glyceraldehyde-3-phosphate dehydrogenase OS=Ajello... [more]
G3PC_CRAPL6.729e-8869.10Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_NEUCR1.499e-8767.24Glyceraldehyde 3-phosphate-dehydrogenase OS=Neuros... [more]
G3PC_GRAVE2.557e-8767.67Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_RAT4.361e-8767.67Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus... [more]
G3P_CRIGR5.696e-8767.67Glyceraldehyde-3-phosphate dehydrogenase OS=Cricet... [more]
G3P_CRYNE7.439e-8769.40Glyceraldehyde-3-phosphate dehydrogenase OS=Crypto... [more]

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Properties
Property NameValue
Genbank descriptionC34210C09EF PostHarveN Citrus clementina cDNA clone C34210C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932593 ID=FC932593; Name=FC932593; organism=Citrus clementina; type=EST; length=715bp
GGTCGGAATCAATGGTTTTGGTCGGATTGGAAGGTTGGTTTTGCGAGTAG
CAGCCTTCAGGGATAATGTTGACGTTGTGGCGGTCAATGATCCTTTTATT
GATGCCAAATACATGGCTTACATGTTTAAGTATGATTCTACTCATGGAGT
TTTCAAGGGAACCATCAATGTCGTGGATGACTCCACCTTAGAAATTAATG
GGAAGCTGATTAAAGTTTTCAGCAAAAGGGACCCGGCAGAGATCCCTTGG
GGTGACTATGGGGTTGATTATGTTGTTGAATCTTCTGGAGTCTTTACAAC
AATTGCGAAGGCTTCAGCTCACATGAAGGGTGGTGCAAAAAAGGTGGTAA
TATCAGCTCCATCAGCTGATGCACCAATGTTTGTGGTAGGAGTGAATGAA
AAGACATACAAGCCAAACATGAACATTGTTTCTAATGCAAGTTGTACTAC
CAATTGTCTCGCTCCTCTTGCTAAGGTGGTTTATGAGGAGTTTGGAATTC
TTGAAGGCTTAATGACCACTGTTCATGCAACTACAGCTACACAAAAGACT
GTAGATGGTCCTTCGATGAAGGATTGGAGAGGAGGGCGTGGAGCTTCACA
AAATATCATTCCTAGTTCAACTGGTGCTGCCAAGGCTGTTGGTAAAGTTC
TTCCAGATCTCAACGGAAAGCTTACTGGCATGGCCTTCCGTGTCCCACTC
CNTATGTGTCTGTTG
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