FC932623

Overview
NameFC932623
Unique NameFC932623
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length732
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932623 vs. ExPASy Swiss-Prot
Match: CYBP_MOUSE (Calcyclin-binding protein OS=Mus musculus GN=Cacybp PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.500e-25
Identity = 76/223 (34.08%), Postives = 117/223 (52.47%), Query Frame = 1
Query:   43 AEMAEDLVLDLEELRQLRSIAKRPRIVSLINSEIHTLEKLSKE--------------EGPAPVPTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIAPEKSKVLVKPTRVVIMLFKASKG---NWLDLQYKE--DKLKPNLDKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDAR 645
            A + E+L  DLEE++ L   + R R+   + SE   +E   K               E PA V  P     T     + + ++ WDQ ++ VKIYI+L GV Q   + ++  F + SFD+   ++ GKNY      L + I+ E S   VK   V+I+  K ++    ++L    KE  +K KP+ D E DP  G+M+++K +YE+GDD+MKRTI KAW ++R
Sbjct:    2 ASVLEELQKDLEEVKVLLEKSTRKRLRDTLTSEKSKIETELKNKMQQKSQKKPELDNEKPAAVVAPLTTGYT-----VKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGKNYSMIVNNLLKPISVESSSKKVKTDTVIILCRKKAENTRWDYLTQVEKECKEKEKPSYDTEADPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 219          
BLAST of FC932623 vs. ExPASy Swiss-Prot
Match: CYBP_RAT (Calcyclin-binding protein OS=Rattus norvegicus GN=Cacybp PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.470e-24
Identity = 74/218 (33.94%), Postives = 119/218 (54.59%), Query Frame = 1
Query:   43 AEMAEDLVLDLEELRQLRSIAKRPRIVSLINSEIHTLE-----KLSKEEGPAPV---PTPAKVSSTPALNY-ITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIAPEKSKVLVKPTRVVIMLFKASKG---NWLDLQYKE--DKLKPNLDKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDAR 645
            A   E+L  DLEE++ L   + R R+   + +E   +E     K+ ++    P      PA V +     Y + + ++ WDQ ++ VKIYI+L GV Q   + ++  F + SFD+   ++ GKNY      L + I+ E S   VK   V+I+  K ++    ++L    KE  +K KP+ D E DP  G+M+++K +YE+GDD+MKRTI KAW ++R
Sbjct:    2 ASALEELQKDLEEVKVLLEKSTRKRLRDTLTNEKSKIETELRNKMQQKSQKKPEFDNEKPAAVVAPLTTGYTVKISNYGWDQSDKFVKIYITLTGVHQVPAENVQVHFTERSFDLLVKNLNGKNYSMIVNNLLKPISVESSSKKVKTDTVIILCRKKAENTRWDYLTQVEKECKEKEKPSYDTEADPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 219          
BLAST of FC932623 vs. ExPASy Swiss-Prot
Match: CYBP_BOVIN (Calcyclin-binding protein OS=Bos taurus GN=CACYBP PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.470e-24
Identity = 74/220 (33.64%), Postives = 118/220 (53.64%), Query Frame = 1
Query:   55 EDLVLDLEELRQLRSIAKRPRIVSLINSEIHTLE---------------KLSKEEGPAPVPTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIAPEKSKVLVKPTRVVIMLFKASKG---NWLDLQYKE--DKLKPNLDKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDAR 645
            E+L  DLEE++ L   A R R+   + +E   +E               +L++ E PA V  P     T     + + ++ WDQ ++ VKIYI+L GV Q   + ++  F + SFD+   ++ GK+Y      L + I+ E S   VK   V+I+  K ++    ++L    KE  +K KP+ D E DP  G+M+++K +YE+GDD+MKRTI KAW ++R
Sbjct:    6 EELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEMKNKMQQKSQRKAELTENEKPAAVVAPITTGYT-----VKISNYGWDQSDKFVKIYITLPGVHQVPAESVQVNFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKAENTRWDYLTQVEKECKEKEKPSYDTETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 220          
BLAST of FC932623 vs. ExPASy Swiss-Prot
Match: CYBP_PONAB (Calcyclin-binding protein OS=Pongo abelii GN=CACYBP PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.186e-24
Identity = 72/221 (32.58%), Postives = 115/221 (52.04%), Query Frame = 1
Query:   52 AEDLVLDLEELRQLRSIAKRPRIVSLINSEIHTLE---------------KLSKEEGPAPVPTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIAPEKSKVLVKPTRVVIMLFKASKGNWLDL-----QYKEDKLKPNLDKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDAR 645
            +E+L  DLEE++ L   A R R+   + +E   +E               +L   E PA V  P     T     + + ++ WDQ ++ VKIYI+L GV Q   + ++  F + SFD+   ++ GK+Y      L + I+ E S   VK   V+I+  K  +    D      + +++K KP+ D E DP  G+M+++K +YE+GDD+MKRTI KAW ++R
Sbjct:    3 SEELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKPAAVVAPITTGYT-----VKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKERKEKEKPSYDAETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 218          
BLAST of FC932623 vs. ExPASy Swiss-Prot
Match: CYBP_MACFA (Calcyclin-binding protein OS=Macaca fascicularis GN=CACYBP PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.186e-24
Identity = 74/221 (33.48%), Postives = 117/221 (52.94%), Query Frame = 1
Query:   52 AEDLVLDLEELRQLRSIAKRPRIVSLINSEIHTLE---------------KLSKEEGPAPVPTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIAPEKSKVLVKPTRVVIMLFKA---SKGNWLDLQYKE--DKLKPNLDKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDAR 645
            +E+L  DLEE++ L   A R R+   + +E   +E               +L   E PA V  P     T     + + ++ WDQ ++ VKIYI+L GV Q   + ++  F + SFD+   ++ GK+Y      L + I+ E S   VK   V+I+  K    ++ ++L    KE  +K KP+ D E DP  G+M+++K +YE+GDD+MKRTI KAW ++R
Sbjct:    3 SEELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKPAAVVAPITTGYT-----VKISNYGWDQSDKFVKIYITLSGVHQVPTENVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKECKEKEKPSYDTETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 218          
BLAST of FC932623 vs. ExPASy Swiss-Prot
Match: CYBP_HUMAN (Calcyclin-binding protein OS=Homo sapiens GN=CACYBP PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 9.386e-24
Identity = 74/221 (33.48%), Postives = 117/221 (52.94%), Query Frame = 1
Query:   52 AEDLVLDLEELRQLRSIAKRPRIVSLINSEIHTLE---------------KLSKEEGPAPVPTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIAPEKSKVLVKPTRVVIMLFKA---SKGNWLDLQYKE--DKLKPNLDKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDAR 645
            +E+L  DLEE++ L   A R R+   + +E   +E               +L   E PA V  P     T     + + ++ WDQ ++ VKIYI+L GV Q   + ++  F + SFD+   ++ GK+Y      L + I+ E S   VK   V+I+  K    ++ ++L    KE  +K KP+ D E DP  G+M+++K +YE+GDD+MKRTI KAW ++R
Sbjct:    3 SEELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKPAAVVAPITTGYT-----VKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKECKEKEKPSYDTETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 218          
The following BLAST results are available for this feature:
BLAST of FC932623 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
CYBP_MOUSE6.500e-2534.08Calcyclin-binding protein OS=Mus musculus GN=Cacyb... [more]
CYBP_RAT2.470e-2433.94Calcyclin-binding protein OS=Rattus norvegicus GN=... [more]
CYBP_BOVIN2.470e-2433.64Calcyclin-binding protein OS=Bos taurus GN=CACYBP ... [more]
CYBP_PONAB7.186e-2432.58Calcyclin-binding protein OS=Pongo abelii GN=CACYB... [more]
CYBP_MACFA7.186e-2433.48Calcyclin-binding protein OS=Macaca fascicularis G... [more]
CYBP_HUMAN9.386e-2433.48Calcyclin-binding protein OS=Homo sapiens GN=CACYB... [more]
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Properties
Property NameValue
Genbank descriptionC34210F03EF PostHarveN Citrus clementina cDNA clone C34210F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932623 ID=FC932623; Name=FC932623; organism=Citrus clementina; type=EST; length=732bp
GGTCCTTCGGTCTTCATCTACTACGCTCTCGTCACTCAGAAGGCAGAAAT
GGCGGAGGATTTGGTGCTGGATTTGGAAGAGCTAAGACAACTACGGAGCA
TCGCAAAACGACCTCGTATCGTCTCTCTTATTAACTCTGAGATTCATACC
TTGGAGAAGTTGTCAAAAGAGGAAGGTCCAGCTCCAGTTCCAACACCAGC
TAAGGTCTCTTCTACTCCAGCACTCAACTATATTACGCTTGGATCATTCA
GCTGGGATCAGGATAATGAAAAAGTCAAGATATATATTTCTTTAGAGGGA
GTAGTCCAGGATAAAATGGAAGCAGAGTTCAAGCAGTGGTCCTTTGATGT
CAAATTCCATGATGTCCAAGGGAAGAATTACCGGTTTACTAGCCCAAGGT
TGAACCAGGAGATTGCTCCTGAGAAAAGCAAGGTGCTGGTTAAACCCACA
AGGGTTGTCATCATGCTCTTTAAAGCTTCAAAGGGAAATTGGTTAGACTT
ACAGTACAAAGAGGATAAGCTGAAGCCAAATCTGGATAAAGAACGAGATC
CTATGGCTGGAATTATGGATTTGATGAAGAATATGTACGAGGAAGGTGAC
GACGAAATGAAGCGAACAATTGCAAAAGCTTGGACAGATGCTAGATCTGG
TAAAACAGCTGATCCTCTGAAGGGATATCCCTAAATAAACTAAGATGTAG
TCGGATACTCCCCAAGATGGNTGATGTCTGTG
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