FC932624
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932624 vs. ExPASy Swiss-Prot
Match: PROSC_HUMAN (Proline synthetase co-transcribed bacterial homolog protein OS=Homo sapiens GN=PROSC PE=1 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 3.627e-40 Identity = 96/204 (47.06%), Postives = 132/204 (64.71%), Query Frame = 3 Query: 114 LRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQ-----LPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGR-KPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGM--PDYTSTPE-NFKTLAKCRSEVCKALGNTEEHV 692 LR+V +RV QA R R P + R+VAVSKTKP ++ + Y G R FGENYVQE++EKA+ L +++WHFIG+LQ V L+A VPNL M+E+VD+ K+A ++N + G + LKV+VQ+NTSGEESK G+ PS + +V+H++ CPNLEF GLMTIG D + P +F+ L R E+CK L + V Sbjct: 17 LRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLEKASNPKILSLCPEIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKLADKVNSSWQRKGSPERLKVMVQINTSGEESKHGLPPSETIAIVEHINAKCPNLEFVGLMTIGSFGHDLSQGPNPDFQLLLSLREELCKKLNIPADQV 219 HSP 2 Score: 21.557 bits (44), Expect = 3.627e-40 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 2 Query: 692 DLSMGMSGDFE 724 +LSMGMS DF+ Sbjct: 220 ELSMGMSADFQ 230
BLAST of FC932624 vs. ExPASy Swiss-Prot
Match: PROSC_PONAB (Proline synthetase co-transcribed bacterial homolog protein OS=Pongo abelii GN=PROSC PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 9.127e-40 Identity = 95/204 (46.57%), Postives = 132/204 (64.71%), Query Frame = 3 Query: 114 LRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQ-----LPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGR-KPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGM--PDYTSTPE-NFKTLAKCRSEVCKALGNTEEHV 692 LR+V +RV QA R P + R+VAVSKTKP ++ + Y G R FGENYVQE++EKA+ L +++WHFIG+LQ V L+A VPNL ++E+VD+ K+AG++N + G + LKV+VQ+NTSGEESK G+ PS + +V+H++ CPNLEF GLMTIG D + P +F+ L R E+CK L + V Sbjct: 17 LRAVNERVQQAVALRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLEKASNPKILSLGPEIKWHFIGHLQKQNVNKLMA-VPNLFVLETVDSVKLAGKVNSSWQKKGSPERLKVMVQINTSGEESKHGLPPSETIAIVEHINAKCPNLEFVGLMTIGSFGHDLSQGPNPDFQLLLSLREELCKKLNIPADQV 219
BLAST of FC932624 vs. ExPASy Swiss-Prot
Match: PROSC_MOUSE (Proline synthetase co-transcribed bacterial homolog protein OS=Mus musculus GN=Prosc PE=1 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.557e-39 Identity = 94/204 (46.08%), Postives = 134/204 (65.69%), Query Frame = 3 Query: 114 LRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP-----DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMG-RKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGM--PDYTSTPE-NFKTLAKCRSEVCKALGNTEEHV 692 LR+V +RV Q+ R R P + R+VAVSKTKP ++ + Y G R FGENYVQE++EKA+ +++WHFIG+LQ V L+A VPNL+M+E+VD+ K+A ++N + G +PLKV+VQ+NTSGE+SK G+ PS + +V+H+ +CP+LEF GLMTIG D + P +F+ L R E+C+ LG E V Sbjct: 17 LRAVNERVQQSVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLEKASNPKILSSCPEIKWHFIGHLQKQNVNKLMA-VPNLSMLETVDSVKLADKVNSSWQKKGPTEPLKVMVQINTSGEDSKHGLLPSETIAVVEHIKASCPSLEFVGLMTIGSFGHDLSQGPNPDFQRLLTLRRELCEKLGIPVEQV 219
BLAST of FC932624 vs. ExPASy Swiss-Prot
Match: PROSC_BOVIN (Proline synthetase co-transcribed bacterial homolog protein OS=Bos taurus GN=PROSC PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.655e-39 Identity = 94/204 (46.08%), Postives = 131/204 (64.22%), Query Frame = 3 Query: 114 LRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP-----DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGR-KPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGM--PDYTSTPE-NFKTLAKCRSEVCKALGNTEEHV 692 LR+V +RV QA R R P + R+VAVSKTKP ++ + Y G R FGENYVQE++EKA+ +++WHFIG+LQ V L+A VPNL+M+E+VD+ K+A ++N + G + LKV+VQ+NTSGE SK G+ P+ LV+H++ CP+LEF GLMTIG D + P +F+ L R E+C+ LG E V Sbjct: 17 LRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYSHGQRTFGENYVQELLEKASNPQILSSCPEIKWHFIGHLQKQNVNKLMA-VPNLSMLETVDSVKLADKVNSAWQKKGSPERLKVMVQINTSGEASKHGLPPAEMAALVEHINAKCPSLEFVGLMTIGSFGHDLSQGPNPDFQVLLSLREELCRKLGAPPEQV 219
BLAST of FC932624 vs. ExPASy Swiss-Prot
Match: PROSC_DICDI (Proline synthetase co-transcribed bacterial homolog protein OS=Dictyostelium discoideum GN=prosc PE=3 SV=2) HSP 1 Score: 159.458 bits (402), Expect = 1.132e-38 Identity = 92/203 (45.32%), Postives = 126/203 (62.07%), Query Frame = 3 Query: 114 LRSVIQRVHQAAERSSRPPDR--IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRL----------NRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHV--SQNCPN-LEFCGLMTIGMPDYTSTPENFKTLAKCRSEVCKAL 671 L S + + E S DR +++VAVSKTKP +IR +Y+ GHR FGENY+QE+V K+ +L + +++WHFIG++QSNK K +L V NL +VE+V+N+KI +L N K L +++QVNTSGEESKSG +P CL+LVKH NC N L F GLMTIG P+ T +FK L C++ + K L Sbjct: 10 LISSYKNIKDRVEIISNKFDRHNVKLVAVSKTKPTEMIRILYDKGHRHFGENYIQELVSKSEELSELNEIKWHFIGSIQSNKSK-ILTSVKNLYVVETVENKKILDKLAKSLLNNEENNNNNNNNNNKKLNIMIQVNTSGEESKSGCKPEECLDLVKHCLEDNNCKNSLNFLGLMTIGNPNATPDQPDFKCLVDCKNNISKQL 211 HSP 2 Score: 21.9422 bits (45), Expect = 1.132e-38 Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 2 Query: 692 DLSMGMSGDFE 724 +LSMGMS DFE Sbjct: 219 ELSMGMSHDFE 229
BLAST of FC932624 vs. ExPASy Swiss-Prot
Match: Y112_PASMU (UPF0001 protein PM0112 OS=Pasteurella multocida GN=PM0112 PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.744e-31 Identity = 81/195 (41.54%), Postives = 116/195 (59.49%), Query Frame = 3 Query: 114 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA---AQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGMP--DYTSTPENFKTLAKCRSEVCKALGNTE 683 L + Q + A +++ RP ++++AVSKTKPV I Q Y+AG FGENYVQE VEK AQ LEWHFIG LQSNK K + + ++++D +KIA RLN +KPL VL+Q+N S E+SKSG++P+ L+L K + QN P+L GLM I P D + + F + ++ +AL + + Sbjct: 7 LAQIQQNIQHAVQQAKRPESAVKLLAVSKTKPVEDIYQAYQAGQTAFGENYVQEGVEKIQYFAQKNIPLEWHFIGPLQSNKTKLV---AEHFDWMQTLDRKKIADRLNEQ-RPHYKKPLNVLIQINISDEDSKSGIQPNEMLDLAKQI-QNLPHLCLRGLMAIPAPTDDLATQEQAFTQMHSLFEQLKQALPDAQ 196
BLAST of FC932624 vs. ExPASy Swiss-Prot
Match: YKC9_SCHPO (UPF0001 protein C644.09 OS=Schizosaccharomyces pombe GN=SPAC644.09 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.253e-30 Identity = 77/169 (45.56%), Postives = 105/169 (62.13%), Query Frame = 3 Query: 177 IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGMPDYTSTPE---NFKTLAKCRSEVCKALG 674 + +VAVSK PV + + Y AG R FGENY+QE ++K +PDD++WHFIG+LQS+K K +A V NL +E++D EK A +N E + + PL V +QVNTSGEE+K GV PS LEL K V Q+ L GLMTIG + + +F+ L+ R + LG Sbjct: 24 VLLVAVSKFHPVETLMEAYNAGQRHFGENYMQEFLKKVELMPDDVQWHFIGSLQSSKCKK-IASVKNLYSIETIDTEKKARLVNSAREAL-QLPLNVYIQVNTSGEENKGGVTPSKVLELCKQV-QDMKYLRLKGLMTIGSISNSQLSDHNPDFQVLSDLRESLQNELG 189
BLAST of FC932624 vs. ExPASy Swiss-Prot
Match: Y090_HAEIN (UPF0001 protein HI0090 OS=Haemophilus influenzae GN=HI0090 PE=1 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.562e-30 Identity = 79/195 (40.51%), Postives = 115/195 (58.97%), Query Frame = 3 Query: 114 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGMP-DYTSTPEN-FKTLAKCRSEVCKALGNTE 683 L + Q++ A + +R + ++++AVSKTKP+S I Y+AG FGENYVQE VEK +LEWHFIG LQSNK + + + ++++D KIA RLN T + PL VL+Q+N S EESKSG++P L L KH+ +N P+L GLM I P D + EN F+ + + ++ + L N + Sbjct: 7 LNLIQQKIETACKEENRNQNTVKLLAVSKTKPISAILSAYQAGQTAFGENYVQEGVEKIQYFESQGINLEWHFIGPLQSNKTRLV---AEHFDWMQTLDRAKIADRLNEQRPT-NKAPLNVLIQINISDEESKSGIQPEEMLTLAKHI-ENLPHLCLRGLMAIPAPTDNIAEQENAFRKMLELFEQLKQVLPNQQ 196
BLAST of FC932624 vs. ExPASy Swiss-Prot
Match: Y461_VIBCH (UPF0001 protein VC_0461 OS=Vibrio cholerae GN=VC_0461 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.109e-28 Identity = 76/191 (39.79%), Postives = 111/191 (58.12%), Query Frame = 3 Query: 114 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDD-----LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTI--GMPDYTSTPENFKTLAKCRSEVCK 665 + + ++ A ++ R ++++AVSKTKPV I + +AG R FGENYVQE V+K + LEWHFIG LQSNK + + + V ++D EKIA RL+ + PL+VL+QVNTSGE SKSG+EP L + +S+ PNL GLM+I +PDY + F LA+ + ++ + Sbjct: 8 IEHITAQIESAQQKCGRARSSVQLLAVSKTKPVEAILEATQAGQRYFGENYVQEGVDKIRYFAEHHPQLALEWHFIGPLQSNKTRLV---AEHFDWVHTIDREKIALRLSEQ-RPVNMPPLQVLIQVNTSGEASKSGIEPQQLFTLAELISR-LPNLTLRGLMSIPENVPDYPAQLAAFTQLAELQQQLAQ 193
BLAST of FC932624 vs. ExPASy Swiss-Prot
Match: YPI1_VIBAL (UPF0001 protein in pilT-proC intergenic region OS=Vibrio alginolyticus PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.754e-28 Identity = 78/183 (42.62%), Postives = 108/183 (59.02%), Query Frame = 3 Query: 114 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK----AAQLPDD-LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTI--GMPDYTSTPENFKTLA 641 + + ++ ++ R P+ ++++AVSKTKPV I + Y+AG FGENYVQE V K A PD+ +EWHFIG +QSNK + + + V ++D KIA RLN KPL+VL+QVNTSGE SKSGV + EL + +S+ PNL GLM+I + DY S F+ LA Sbjct: 8 IEHITSQIRYDEQKCGRTPESVQLLAVSKTKPVEAILEAYQAGQTAFGENYVQEGVSKVQHFAEHYPDNRIEWHFIGPIQSNKSRLV---AEHFDWVHTIDRTKIAQRLNDQ-RPSELKPLQVLIQVNTSGEASKSGVTEAEVFELAELISR-LPNLTLRGLMSIPANVSDYESQLHEFQKLA 185 The following BLAST results are available for this feature:
BLAST of FC932624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932624 ID=FC932624; Name=FC932624; organism=Citrus clementina; type=EST; length=726bpback to top |