FC932642
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932642 vs. ExPASy Swiss-Prot
Match: NLAL1_ARATH (Putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 OS=Arabidopsis thaliana GN=At3g03920 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 9.036e-37 Identity = 72/85 (84.71%), Postives = 81/85 (95.29%), Query Frame = 1 Query: 412 EGPPAEVVEVSSFLHACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINESYFSVKMMEGIVATSYSLGDKFYIDPSK 666 EGPP+EVVEV++F+HACEGDAVTKL+ EKIP+FNAPIYL+NKTQIGKVDEIFGPINES FS+KMMEGIVATSYS GDKF+IDP K Sbjct: 52 EGPPSEVVEVATFVHACEGDAVTKLSQEKIPHFNAPIYLENKTQIGKVDEIFGPINESLFSIKMMEGIVATSYSPGDKFFIDPYK 136
BLAST of FC932642 vs. ExPASy Swiss-Prot
Match: NLAL2_ARATH (H/ACA ribonucleoprotein complex subunit 1-like protein 2 OS=Arabidopsis thaliana GN=At5g18180 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.797e-35 Identity = 70/85 (82.35%), Postives = 78/85 (91.76%), Query Frame = 1 Query: 412 EGPPAEVVEVSSFLHACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINESYFSVKMMEGIVATSYSLGDKFYIDPSK 666 EGPP+EVVEV++FLHACEGDAV KL+N KIP+FNAPIYLQNKTQIG+VDEIFGPINES FS+KM EGIVATSYS GDKF+I P K Sbjct: 39 EGPPSEVVEVATFLHACEGDAVFKLSNVKIPHFNAPIYLQNKTQIGRVDEIFGPINESLFSIKMREGIVATSYSQGDKFFISPEK 123
BLAST of FC932642 vs. ExPASy Swiss-Prot
Match: GAR1_CANGA (H/ACA ribonucleoprotein complex subunit 1 OS=Candida glabrata GN=GAR1 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.914e-27 Identity = 53/85 (62.35%), Postives = 66/85 (77.65%), Query Frame = 1 Query: 412 EGPPAEVVEVSSFLHACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINESYFSVKMMEGIVATSYSLGDKFYIDPSK 666 +GPP V+E+ F+H CEGD V + N K+PYFNAPIYL+NKTQ+GKVDEI GP+NE YF++K EG+ ATS+ GDKFYI P K Sbjct: 32 QGPPDTVLEMGEFMHPCEGDVVCRSINTKVPYFNAPIYLENKTQVGKVDEILGPLNEVYFTIKCGEGVQATSFKEGDKFYIAPDK 116
BLAST of FC932642 vs. ExPASy Swiss-Prot
Match: GAR1_KLULA (H/ACA ribonucleoprotein complex subunit 1 OS=Kluyveromyces lactis GN=GAR1 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.970e-27 Identity = 54/85 (63.53%), Postives = 67/85 (78.82%), Query Frame = 1 Query: 412 EGPPAEVVEVSSFLHACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINESYFSVKMMEGIVATSYSLGDKFYIDPSK 666 +GPP V+E+ +FLH CEGD V + N KIPYFNAPIYL+NKTQ+GKVDEI GP+NE +F+VK +G+ A S+S GDKFYI P K Sbjct: 29 QGPPDSVLEMGAFLHPCEGDIVCRSINTKIPYFNAPIYLENKTQVGKVDEILGPLNEVFFTVKCSDGVKAESFSEGDKFYIAPDK 113
BLAST of FC932642 vs. ExPASy Swiss-Prot
Match: GAR1_COCIM (H/ACA ribonucleoprotein complex subunit 1 OS=Coccidioides immitis GN=GAR1 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.491e-27 Identity = 54/84 (64.29%), Postives = 66/84 (78.57%), Query Frame = 1 Query: 415 GPPAEVVEVSSFLHACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINESYFSVKMMEGIVATSYSLGDKFYIDPSK 666 GPP V+E+ SF+HACEG+ V + N KIPYFNAPIYL+NKT +GKVDE+ GPIN+ YF++K EGIVATS+ GDKFYI K Sbjct: 35 GPPTTVLEMGSFMHACEGEMVCESINPKIPYFNAPIYLENKTPVGKVDEVLGPINQVYFTIKPQEGIVATSFKPGDKFYIGGDK 118
BLAST of FC932642 vs. ExPASy Swiss-Prot
Match: GAR1_NEOFI (H/ACA ribonucleoprotein complex subunit 1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=gar1 PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.477e-27 Identity = 54/84 (64.29%), Postives = 67/84 (79.76%), Query Frame = 1 Query: 415 GPPAEVVEVSSFLHACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINESYFSVKMMEGIVATSYSLGDKFYIDPSK 666 GPPA+V+E+ +F+HACEG+ V + N KIPYFNAPIYL+NKT IGKVDE+ GPIN+ YF++K EGIVATS+ GDK YI K Sbjct: 35 GPPAQVLEMGTFMHACEGEMVCESVNPKIPYFNAPIYLENKTPIGKVDEVLGPINQVYFTIKPQEGIVATSFKPGDKVYIGGDK 118
BLAST of FC932642 vs. ExPASy Swiss-Prot
Match: GAR1_CHAGB (H/ACA ribonucleoprotein complex subunit 1 OS=Chaetomium globosum GN=GAR1 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.221e-26 Identity = 52/84 (61.90%), Postives = 66/84 (78.57%), Query Frame = 1 Query: 415 GPPAEVVEVSSFLHACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINESYFSVKMMEGIVATSYSLGDKFYIDPSK 666 GPPA V+E+ F+HACEG+ V + TN K+P+FNAPIYL+NKT +GKVDE+ GPIN+ YF++K EGI ATS+ GDKFYI K Sbjct: 32 GPPATVLEMGKFIHACEGEMVIESTNPKVPHFNAPIYLENKTAVGKVDEVLGPINQVYFTIKPSEGIQATSFKYGDKFYIAGEK 115
BLAST of FC932642 vs. ExPASy Swiss-Prot
Match: GAR1_YEAST (H/ACA ribonucleoprotein complex subunit 1 OS=Saccharomyces cerevisiae GN=GAR1 PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.177e-26 Identity = 52/85 (61.18%), Postives = 66/85 (77.65%), Query Frame = 1 Query: 412 EGPPAEVVEVSSFLHACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINESYFSVKMMEGIVATSYSLGDKFYIDPSK 666 +GPP V+E+ +FLH CEGD V + N KIPYFNAPIYL+NKTQ+GKVDEI GP+NE +F++K +G+ ATS+ GDKFYI K Sbjct: 31 QGPPDTVLEMGAFLHPCEGDIVCRSINTKIPYFNAPIYLENKTQVGKVDEILGPLNEVFFTIKCGDGVQATSFKEGDKFYIAADK 115
BLAST of FC932642 vs. ExPASy Swiss-Prot
Match: GAR1_SCHPO (H/ACA ribonucleoprotein complex subunit 1 OS=Schizosaccharomyces pombe GN=gar1 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.373e-26 Identity = 50/84 (59.52%), Postives = 68/84 (80.95%), Query Frame = 1 Query: 415 GPPAEVVEVSSFLHACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINESYFSVKMMEGIVATSYSLGDKFYIDPSK 666 GPP +V+E+ F+H CEG+ V + TN KIPYFNAPIYL+NK+QIGK+DE+FGP+N+ YF+VK EGIV++S+ +GDK Y+ K Sbjct: 25 GPPDQVIELGLFMHDCEGEMVCQSTNVKIPYFNAPIYLENKSQIGKIDEVFGPMNQVYFTVKPSEGIVSSSFKVGDKVYLSGDK 108
BLAST of FC932642 vs. ExPASy Swiss-Prot
Match: GAR1_ASHGO (H/ACA ribonucleoprotein complex subunit 1 OS=Ashbya gossypii GN=GAR1 PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.373e-26 Identity = 51/85 (60.00%), Postives = 66/85 (77.65%), Query Frame = 1 Query: 412 EGPPAEVVEVSSFLHACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINESYFSVKMMEGIVATSYSLGDKFYIDPSK 666 +GPP VVE+ +F+H CEGD V + N KIPYFNA IYL+NKT++GKVDEI GP+NE +F++K EG+ A+S+ GDKFYI P K Sbjct: 32 QGPPDSVVEMGAFMHDCEGDIVCRSINTKIPYFNAMIYLENKTEVGKVDEILGPLNEVFFTIKCAEGVKASSFKDGDKFYISPEK 116 The following BLAST results are available for this feature:
BLAST of FC932642 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932642 ID=FC932642; Name=FC932642; organism=Citrus clementina; type=EST; length=702bpback to top |