BQ623331

Overview
NameBQ623331
Unique NameBQ623331
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length556
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2066 contig Csv1_Contig2066:234..788. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623331 vs. ExPASy Swiss-Prot
Match: UBC28_ARATH (Ubiquitin carrier protein E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 2.973e-78
Identity = 134/140 (95.71%), Postives = 139/140 (99.29%), Query Frame = 1
Query:    1 ELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAMG 420
            ELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPN+NSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK+D+AKYE+TARSWTQKYAMG
Sbjct:    9 ELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYAMG 148          
BLAST of BQ623331 vs. ExPASy Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 3.882e-78
Identity = 135/140 (96.43%), Postives = 138/140 (98.57%), Query Frame = 1
Query:    1 ELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAMG 420
            ELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPYAGGVFLV+IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK+D+AKYE TARSWTQKYAMG
Sbjct:    9 ELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 148          
BLAST of BQ623331 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 6.622e-78
Identity = 134/140 (95.71%), Postives = 139/140 (99.29%), Query Frame = 1
Query:    1 ELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAMG 420
            ELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP +SPY+GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK+D+AKYEATAR+WTQKYAMG
Sbjct:    9 ELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEATARNWTQKYAMG 148          
BLAST of BQ623331 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 6.622e-78
Identity = 135/140 (96.43%), Postives = 138/140 (98.57%), Query Frame = 1
Query:    1 ELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAMG 420
            ELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP +SPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK+DK KYE+TARSWTQKYAMG
Sbjct:    9 ELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARSWTQKYAMG 148          
BLAST of BQ623331 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 1.130e-77
Identity = 134/140 (95.71%), Postives = 138/140 (98.57%), Query Frame = 1
Query:    1 ELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAMG 420
            ELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK+DK KYE+TAR+WTQKYAMG
Sbjct:    9 ELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARTWTQKYAMG 148          
BLAST of BQ623331 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2)

HSP 1 Score: 285.034 bits (728), Expect = 1.631e-76
Identity = 129/140 (92.14%), Postives = 140/140 (100.00%), Query Frame = 1
Query:    1 ELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAMG 420
            ELKDLQKDPP++CSAGPVAEDMFHWQATIMGPP+SPYAGGVFLV+IHFPPDYPFKPPKV+F+TKV+HPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK+D++KYE+TARSWTQKYAMG
Sbjct:    9 ELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYESTARSWTQKYAMG 148          
BLAST of BQ623331 vs. ExPASy Swiss-Prot
Match: UBC30_ARATH (Ubiquitin carrier protein E2 30 OS=Arabidopsis thaliana GN=UBC30 PE=2 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 6.414e-73
Identity = 123/140 (87.86%), Postives = 134/140 (95.71%), Query Frame = 1
Query:    1 ELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAMG 420
            EL+DLQ+DPP SCSAGP  +DMF WQATIMGP DSP+AGGVFLVTIHFPPDYPFKPPKVAFRTKV+HPNINSNGSICLDILKEQWSPALT+SKVLLSICSLLTDPNPDDPLVPEIAH+YK+D+ KYE+TA+SWTQKYAMG
Sbjct:    9 ELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHIYKTDRVKYESTAQSWTQKYAMG 148          
BLAST of BQ623331 vs. ExPASy Swiss-Prot
Match: UBC29_ARATH (Ubiquitin carrier protein E2 29 OS=Arabidopsis thaliana GN=UBC29 PE=2 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 9.262e-72
Identity = 122/139 (87.77%), Postives = 131/139 (94.24%), Query Frame = 1
Query:    1 ELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAM 417
            ELK+LQ+DPP SCSAGP  EDMFHWQATIMGP +SPY+GGVFLV IHFPPDYPFKPPKV FRTKVFHPNINSNG+ICLDILK+QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAH+YK+DK KYEA ARSWTQKYA+
Sbjct:    9 ELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHIYKTDKTKYEAMARSWTQKYAL 147          
BLAST of BQ623331 vs. ExPASy Swiss-Prot
Match: UBC4_YEAST (Ubiquitin-conjugating enzyme E2 4 OS=Saccharomyces cerevisiae GN=UBC4 PE=1 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 1.172e-66
Identity = 109/139 (78.42%), Postives = 130/139 (93.53%), Query Frame = 1
Query:    1 ELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAM 417
            EL DL++DPPTSCSAGPV +D++HWQA+IMGP DSPYAGGVF ++IHFP DYPFKPPK++F TK++HPNIN+NG+ICLDILK+QWSPALT+SKVLLSICSLLTD NPDDPLVPEIAH+YK+D+ KYEATAR WT+KYA+
Sbjct:   10 ELSDLERDPPTSCSAGPVGDDLYHWQASIMGPADSPYAGGVFFLSIHFPTDYPFKPPKISFTTKIYHPNINANGNICLDILKDQWSPALTLSKVLLSICSLLTDANPDDPLVPEIAHIYKTDRPKYEATAREWTKKYAV 148          
BLAST of BQ623331 vs. ExPASy Swiss-Prot
Match: UBC1_COLGL (Ubiquitin-conjugating enzyme E2-16 kDa OS=Colletotrichum gloeosporioides GN=UBC1 PE=2 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 1.172e-66
Identity = 111/139 (79.86%), Postives = 129/139 (92.81%), Query Frame = 1
Query:    1 ELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAM 417
            EL DL +DPP+SCSAGPV ED+FHWQATIMGP DSPY+GGVF + IHFP DYPFKPPKV F T+++HPNINSNGSICLDIL++QWSPALTISKVLLSICS+LTDPNPD+PLVPEIAH+YK+D+A+YEATAR WT+KYA+
Sbjct:    9 ELTDLGRDPPSSCSAGPVGEDLFHWQATIMGPGDSPYSGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDEPLVPEIAHVYKTDRARYEATAREWTRKYAI 147          
The following BLAST results are available for this feature:
BLAST of BQ623331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 264
Match NameE-valueIdentityDescription
UBC28_ARATH2.973e-7895.71Ubiquitin carrier protein E2 28 OS=Arabidopsis tha... [more]
UBC4_SOLLC3.882e-7896.43Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum ... [more]
UBC8_ARATH6.622e-7895.71Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis t... [more]
UBC10_ARATH6.622e-7896.43Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis ... [more]
UBC9_ARATH1.130e-7795.71SUMO-conjugating enzyme UBC9 OS=Arabidopsis thalia... [more]
UBC11_ARATH1.631e-7692.14Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis ... [more]
UBC30_ARATH6.414e-7387.86Ubiquitin carrier protein E2 30 OS=Arabidopsis tha... [more]
UBC29_ARATH9.262e-7287.77Ubiquitin carrier protein E2 29 OS=Arabidopsis tha... [more]
UBC4_YEAST1.172e-6678.42Ubiquitin-conjugating enzyme E2 4 OS=Saccharomyces... [more]
UBC1_COLGL1.172e-6679.86Ubiquitin-conjugating enzyme E2-16 kDa OS=Colletot... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00422 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00422 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623331 ID=BQ623331; Name=BQ623331; organism=Citrus sinensis; type=EST; length=556bp
GAACTCAAGGATTTGCAGAAGGATCCTCCCACGTCTTGCAGCGCTGGTCC
GGTGGCTGAAGACATGTTCCATTGGCAAGCAACAATTATGGGCCCCCCTG
ATAGTCCATATGCAGGAGGTGTATTTTTGGTTACCATTCATTTTCCTCCA
GATTATCCCTTCAAGCCCCCAAAGGTTGCTTTTAGGACCAAGGTCTTCCA
CCCAAACATCAACAGCAATGGAAGCATATGTCTTGATATCCTTAAAGAAC
AGTGGAGCCCAGCTCTTACCATTTCAAAGGTCCTGCTTTCTATCTGCTCG
TTGCTTACTGACCCAAATCCTGACGACCCGCTTGTACCGGAGATTGCTCA
CATGTACAAGTCCGACAAGGCCAAATATGAAGCCACTGCCAGGAGCTGGA
CACAGAAGTATGCCATGGGATAGTTGTTTGGATATTGCAGAAATGGAACT
CATTTATATGAAATATGTTGTGTTTTTTTCTCCTTTTTCTTCAATCTTGC
TTCGGGAAGGGGATGTTTTGTATTTTAGTATGAGGAAGGATGTTTGGGGA
GGAGTT
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