BQ623531

Overview
NameBQ623531
Unique NameBQ623531
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
BQ623531_ssr40 microsatellite BQ623531_ssr40:40..55. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
[Close]
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL117_ARATH (Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana GN=At5g39150 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 1.736e-55
Identity = 76/97 (78.35%), Postives = 85/97 (87.63%), Query Frame = 3 
Query:  138 FDPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            +DPSPLQD CVAID+PKN VFVNGKFCKDPK AKA+DFF SGL++ G T N++  +VT  NV+QIPGLNTLGIS VRIDYAPYGQNPPHTHPRATEI
Sbjct:   22 YDPSPLQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVQSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEI 118

HSP 2 Score: 72.0182 bits (175), Expect = 1.736e-55
Identity = 42/85 (49.41%), Postives = 49/85 (57.65%), Query Frame = 1 
Query:  430 LVVLEGTLYVGFCDIKPAE*HTHCKSSEQGRCFCVSDWHDSLPIHIGKTNAVAIAALSSQFPGVITIANTGFGANPPINPDFLAR 684
            LV++EGTLYVGF            K    G  F          ++IGKT AVA A LSSQ  GVITIA+T FG+ PPINPD LA+
Sbjct:  119 LVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQ 203
[Close]
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL115_ARATH (Germin-like protein subfamily 1 member 15 OS=Arabidopsis thaliana GN=At5g39120 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 1.736e-55
Identity = 76/97 (78.35%), Postives = 85/97 (87.63%), Query Frame = 3 
Query:  138 FDPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            +DPSPLQD CVAID+PKN VFVNGKFCKDPK AKA+DFF SGL++ G T N++  +VT  NV+QIPGLNTLGIS VRIDYAPYGQNPPHTHPRATEI
Sbjct:   22 YDPSPLQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVKSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEI 118

HSP 2 Score: 72.0182 bits (175), Expect = 1.736e-55
Identity = 42/85 (49.41%), Postives = 49/85 (57.65%), Query Frame = 1 
Query:  430 LVVLEGTLYVGFCDIKPAE*HTHCKSSEQGRCFCVSDWHDSLPIHIGKTNAVAIAALSSQFPGVITIANTGFGANPPINPDFLAR 684
            LV++EGTLYVGF            K    G  F          ++IGKT AVA A LSSQ  GVITIA+T FG+ PPINPD LA+
Sbjct:  119 LVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQ 203
[Close]
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL119_ARATH (Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana GN=At5g39180 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 8.522e-55
Identity = 76/97 (78.35%), Postives = 85/97 (87.63%), Query Frame = 3 
Query:  138 FDPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            +DPSPLQD CVAID+PKN VFVNGKFCKDPK AKA+DFF SGL++ G T N++  +VT  NV+QIPGLNTLGIS VRIDYAPYGQNPPHTHPRATEI
Sbjct:   22 YDPSPLQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVQSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEI 118

HSP 2 Score: 69.707 bits (169), Expect = 8.522e-55
Identity = 41/85 (48.24%), Postives = 48/85 (56.47%), Query Frame = 1 
Query:  430 LVVLEGTLYVGFCDIKPAE*HTHCKSSEQGRCFCVSDWHDSLPIHIGKTNAVAIAALSSQFPGVITIANTGFGANPPINPDFLAR 684
            LV++EGTLYVGF            K    G  F          ++IGKT AVA A LSSQ  GVITIA+  FG+ PPINPD LA+
Sbjct:  119 LVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADIVFGSTPPINPDILAQ 203
[Close]
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL113_ARATH (Germin-like protein subfamily 1 member 13 OS=Arabidopsis thaliana GN=GLP6 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 1.111e-54
Identity = 74/97 (76.29%), Postives = 85/97 (87.63%), Query Frame = 3 
Query:  138 FDPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            +DPSPLQD CVAID+ KN VFVNGKFCKDPK AKA+DFF SGL++ G+T N++  +VT  NV+QIPGLNT+GIS VRIDYAPYGQNPPHTHPRATEI
Sbjct:   23 YDPSPLQDFCVAIDDLKNGVFVNGKFCKDPKQAKAEDFFFSGLNQAGSTNNKVRSNVTTVNVDQIPGLNTMGISLVRIDYAPYGQNPPHTHPRATEI 119

HSP 2 Score: 71.633 bits (174), Expect = 1.111e-54
Identity = 42/85 (49.41%), Postives = 49/85 (57.65%), Query Frame = 1 
Query:  430 LVVLEGTLYVGFCDIKPAE*HTHCKSSEQGRCFCVSDWHDSLPIHIGKTNAVAIAALSSQFPGVITIANTGFGANPPINPDFLAR 684
            LV++EGTLYVGF            K    G  F          ++IGKT AVA A LSSQ  GVITIA+T FG+ PPINPD LA+
Sbjct:  120 LVLIEGTLYVGFVSSNQDNNRLFAKVLYPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQ 204
[Close]
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL114_ARATH (Germin-like protein subfamily 1 member 14 OS=Arabidopsis thaliana GN=At5g39110 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.208e-53
Identity = 74/96 (77.08%), Postives = 82/96 (85.42%), Query Frame = 3 
Query:  141 DPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            DPSPLQD CVAI + KN VFVNGKFCKDPK AKA+DFF SGL++ G T N++  +VT  NV+QIPGLNTLGIS VRIDYAPYGQNPPHTHPRATEI
Sbjct:   24 DPSPLQDFCVAIGDLKNGVFVNGKFCKDPKQAKAEDFFYSGLNQAGTTNNKVKSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEI 119

HSP 2 Score: 72.0182 bits (175), Expect = 1.208e-53
Identity = 42/85 (49.41%), Postives = 49/85 (57.65%), Query Frame = 1 
Query:  430 LVVLEGTLYVGFCDIKPAE*HTHCKSSEQGRCFCVSDWHDSLPIHIGKTNAVAIAALSSQFPGVITIANTGFGANPPINPDFLAR 684
            LV++EGTLYVGF            K    G  F          ++IGKT AVA A LSSQ  GVITIA+T FG+ PPINPD LA+
Sbjct:  120 LVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQ 204
[Close]
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL118_ARATH (Germin-like protein subfamily 1 member 18 OS=Arabidopsis thaliana GN=GLP2A PE=2 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 3.161e-51
Identity = 70/97 (72.16%), Postives = 82/97 (84.54%), Query Frame = 3 
Query:  138 FDPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            +DPSPLQD CVAID+ K  VFVNG+FCKDPK   A+DFF SGL+ PGNT N++G +VT  NV+QIPGLNT+GIS VRIDYAP+GQNPPHTHPR +EI
Sbjct:   23 YDPSPLQDFCVAIDDLKG-VFVNGRFCKDPKRVDAKDFFFSGLNMPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEI 118

HSP 2 Score: 70.4774 bits (171), Expect = 3.161e-51
Identity = 41/85 (48.24%), Postives = 48/85 (56.47%), Query Frame = 1 
Query:  430 LVVLEGTLYVGFCDIKPAE*HTHCKSSEQGRCFCVSDWHDSLPIHIGKTNAVAIAALSSQFPGVITIANTGFGANPPINPDFLAR 684
            LV++EGTLYVGF            K    G  F          +++GK  AVA A LSSQ  GVITIANT FG+NPPI P+ LAR
Sbjct:  119 LVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYPELLAR 203
[Close]
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL120_ARATH (Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana GN=GLP5A PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.120e-51
Identity = 70/97 (72.16%), Postives = 82/97 (84.54%), Query Frame = 3 
Query:  138 FDPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            +DPSPLQD CVAID+ K  VFVNG+FCKDPK   A+DFF SGL+ PGNT N++G +VT  NV+QIPGLNT+GIS VRIDYAP+GQNPPHTHPR +EI
Sbjct:   23 YDPSPLQDFCVAIDDLKG-VFVNGRFCKDPKRVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEI 118

HSP 2 Score: 70.4774 bits (171), Expect = 4.120e-51
Identity = 41/85 (48.24%), Postives = 48/85 (56.47%), Query Frame = 1 
Query:  430 LVVLEGTLYVGFCDIKPAE*HTHCKSSEQGRCFCVSDWHDSLPIHIGKTNAVAIAALSSQFPGVITIANTGFGANPPINPDFLAR 684
            LV++EGTLYVGF            K    G  F          +++GK  AVA A LSSQ  GVITIANT FG+NPPI P+ LAR
Sbjct:  119 LVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYPELLAR 203
[Close]
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL116_ARATH (Germin-like protein subfamily 1 member 16 OS=Arabidopsis thaliana GN=At5g39130 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.550e-50
Identity = 69/97 (71.13%), Postives = 82/97 (84.54%), Query Frame = 3 
Query:  138 FDPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            +DPSPLQD CVAID+ K  VFVNG+FCKDP+   A+DFF SGL+ PGNT N++G +VT  NV+QIPGLNT+GIS VRIDYAP+GQNPPHTHPR +EI
Sbjct:   23 YDPSPLQDFCVAIDDLKG-VFVNGRFCKDPERVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEI 118

HSP 2 Score: 70.0922 bits (170), Expect = 1.550e-50
Identity = 41/85 (48.24%), Postives = 48/85 (56.47%), Query Frame = 1 
Query:  430 LVVLEGTLYVGFCDIKPAE*HTHCKSSEQGRCFCVSDWHDSLPIHIGKTNAVAIAALSSQFPGVITIANTGFGANPPINPDFLAR 684
            LV++EGTLYVGF            K    G  F          ++IGK  A+A A LSSQ  GVITIANT FG+NPPI P+ LAR
Sbjct:  119 LVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQLNIGKIPAIAFAGLSSQNAGVITIANTVFGSNPPIYPELLAR 203
[Close]
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL17_ARATH (Germin-like protein subfamily 1 member 7 OS=Arabidopsis thaliana GN=At3g05950 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 8.255e-49
Identity = 71/97 (73.20%), Postives = 83/97 (85.57%), Query Frame = 3 
Query:  138 FDPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            +DPSPLQD CVA+D+  + VFVNGKFCKDPK  KA+DFF SGL+  GNT NR+G +VTN NV++IPGLNTLG+S VRID+AP GQNPPHTHPRATEI
Sbjct:   25 YDPSPLQDFCVAVDDA-SGVFVNGKFCKDPKYVKAEDFFTSGLNIAGNTINRVGSNVTNVNVDKIPGLNTLGVSLVRIDFAPGGQNPPHTHPRATEI 120

HSP 2 Score: 60.8474 bits (146), Expect = 8.255e-49
Identity = 36/85 (42.35%), Postives = 45/85 (52.94%), Query Frame = 1 
Query:  430 LVVLEGTLYVGFCDIKPAE*HTHCKSSEQGRCFCVSDWHDSLPIHIGKTNAVAIAALSSQFPGVITIANTGFGANPPINPDFLAR 684
            LVV+EGTL VGF            K    G  F          +++G+TNAVA A L SQ PG ITIA+  FG+ P I P+ LA+
Sbjct:  121 LVVVEGTLLVGFVTSNQDNNRLFSKVLYPGDVFVFPIGMIHFQVNVGRTNAVAFAGLGSQNPGTITIADAVFGSKPSIMPEILAK 205
[Close]
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL112_ARATH (Putative germin-like protein subfamily 1 member 12 OS=Arabidopsis thaliana GN=At5g38960 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 7.464e-47
Identity = 67/97 (69.07%), Postives = 76/97 (78.35%), Query Frame = 3 
Query:  141 DPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNT-ANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            DPSPLQD C+ ++ P NA+FVNGKFCKDPKL  A DF+ SGLDK   T ++ +G +VT  NV QIPGLNTLGIS VRIDY   GQNPPHTHPRATEI
Sbjct:   26 DPSPLQDFCIGVNTPANALFVNGKFCKDPKLVTADDFYFSGLDKARTTESSPVGSNVTTVNVNQIPGLNTLGISLVRIDYGINGQNPPHTHPRATEI 122

HSP 2 Score: 66.2402 bits (160), Expect = 7.464e-47
Identity = 40/85 (47.06%), Postives = 52/85 (61.18%), Query Frame = 1 
Query:  430 LVVLEGTLYVGFCDIKPAE*HTHCKSSEQGRCFCVSDWHDSLPIHIGKTNAVAIAALSSQFPGVITIANTGFGANPPINPDFLAR 684
            L+V EGTL+VGF    P E     K+  +G  F   +      ++IGK  AVA A+LSSQ PGVI I NT FG+ PPI+P+ LA+
Sbjct:  123 LLVQEGTLFVGFFSSFP-ENRLFNKTLNKGDVFVFPEGLIHFQVNIGKQPAVAFASLSSQNPGVIIIGNTLFGSKPPIDPNVLAK 206
The following BLAST results are available for this feature:
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
GL117_ARATH1.736e-5578.35Germin-like protein subfamily 1 member 17 OS=Arabi... [more]
GL115_ARATH1.736e-5578.35Germin-like protein subfamily 1 member 15 OS=Arabi... [more]
GL119_ARATH8.522e-5578.35Germin-like protein subfamily 1 member 19 OS=Arabi... [more]
GL113_ARATH1.111e-5476.29Germin-like protein subfamily 1 member 13 OS=Arabi... [more]
GL114_ARATH1.208e-5377.08Germin-like protein subfamily 1 member 14 OS=Arabi... [more]
GL118_ARATH3.161e-5172.16Germin-like protein subfamily 1 member 18 OS=Arabi... [more]
GL120_ARATH4.120e-5172.16Germin-like protein subfamily 1 member 20 OS=Arabi... [more]
GL116_ARATH1.550e-5071.13Germin-like protein subfamily 1 member 16 OS=Arabi... [more]
GL17_ARATH8.255e-4973.20Germin-like protein subfamily 1 member 7 OS=Arabid... [more]
GL112_ARATH7.464e-4769.07Putative germin-like protein subfamily 1 member 12... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00622 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00622 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623531 ID=BQ623531; Name=BQ623531; organism=Citrus sinensis; type=EST; length=693bp
AATAAGTTCAGAAATTGATTAAACAGAGTGAGATCCTACAGCTAGCTAGC
TAGCTAATTAAACACACAATGAAAACCAGTGTTCAATTTCTTAAAGGTTT
TGCTCTCTTGGTTTTAGCTTCTTCGTTGGCCTCTGCCTTTGATCCTAGTC
CTCTTCAGGATATCTGTGTAGCCATCGATGAGCCCAAGAACGCAGTTTTT
GTTAACGGGAAGTTCTGCAAGGACCCCAAGCTTGCTAAAGCTCAAGATTT
CTTCTTATCAGGGCTAGACAAGCCTGGAAACACAGCAAACCGTCTTGGTT
TTAGTGTGACAAATGCAAATGTTGAGCAAATTCCAGGACTCAACACCCTT
GGCATATCAGCAGTCCGTATTGACTATGCACCATACGGCCAAAACCCACC
TCACACGCACCCTCGTGCCACTGAGATCCCTGGTGGTCCTGGAGGGAACA
CTTTATGTTGGTTTTTGTGACATCAAACCAGCTGAATAACACACTCATTG
CAAAAGTTCTGAACAAGGGAGATGTTTTTGTGTTTCCGATTGGCATGATT
CACTTCCAATTCACATCGGAAAAACAAATGCAGTTGCAATTGCTGCTCTA
AGCAGCCAGTTCCCTGGTGTCATTACCATAGCAAACACGGGCTTCGGAGC
CAATCCTCCGATCAATCCTGATTTTCTTGCCAGGCGTCCAGTT
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