BQ623623

Overview
NameBQ623623
Unique NameBQ623623
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length495
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623623 vs. ExPASy Swiss-Prot
Match: GDL61_ARATH (GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana GN=At4g01130 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 3.159e-40
Identity = 84/116 (72.41%), Postives = 95/116 (81.90%), Query Frame = 2
Query:    2 YRHGANYATLASTVLLPNTSLFVTGISPFSLAIQLNQMKEFKARVDEFHSSCTSGSTKLPSPDIFGKSLYTFYIGQNDFTSNLAAIGIGGVKQFLPQVVSQIAGTVKVMALIGPAT 349
            +RHGAN+ATLASTVLLPNTSLFV+GISPFSLAIQLNQMK+FK  VDE HS    G   LPS  +FGKSLYTFYIGQNDFTSNLA+IG+  VK +LPQV+ QIAGT+K +  IG  T
Sbjct:  101 FRHGANFATLASTVLLPNTSLFVSGISPFSLAIQLNQMKQFKVNVDESHSLDRPGLKILPSKIVFGKSLYTFYIGQNDFTSNLASIGVERVKLYLPQVIGQIAGTIKEIYGIGGRT 216          
BLAST of BQ623623 vs. ExPASy Swiss-Prot
Match: GDL76_ARATH (GDSL esterase/lipase At5g14450 OS=Arabidopsis thaliana GN=At5g14450 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 9.256e-16
Identity = 44/109 (40.37%), Postives = 64/109 (58.72%), Query Frame = 2
Query:    2 YRHGANYATLASTVLLPNTSLFVTGISPFSLAIQLNQMKEFKARVDEFHSSCTS--GSTKLPSPDIFGKSLYTFYIGQNDFTSNLAAIGIGGVKQFLPQVVSQIAGTVK 322
            +RHGAN+AT  ST+   N ++F  GISPFSL +Q+ Q  +FKAR     +   S     KLP  + F K+LYTF IGQND +     + +  +K  +P +V+ +A  V+
Sbjct:  108 FRHGANFATGGSTIRRQNETIFQYGISPFSLDMQIAQFDQFKARSALLFTQIKSRYDREKLPRQEEFAKALYTFDIGQNDLSVGFRTMSVDQLKATIPDIVNHLASAVR 216          
BLAST of BQ623623 vs. ExPASy Swiss-Prot
Match: GDL53_ARATH (GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana GN=At3g26430 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 7.334e-13
Identity = 39/108 (36.11%), Postives = 60/108 (55.56%), Query Frame = 2
Query:    2 YRHGANYATLASTVLLPNTSLFVTGISPFSLAIQLNQMKEFKARVDEFHSSCTSGSTKLPSPDIFGKSLYTFYIGQNDFTSNLAA-IGIGGVKQFLPQVVSQIAGTVK 322
            + HGAN+AT  STV  PN ++  +G+SP SL +QL Q  +F  R     +        LP  + F ++LYTF IGQND T+ L   +    +K ++P V  Q++  ++
Sbjct:   98 FSHGANFATAGSTVRPPNATIAQSGVSPISLDVQLVQFSDFITRSQLIRNRGGVFKKLLPKKEYFSQALYTFDIGQNDLTAGLKLNMTSDQIKAYIPDVHDQLSNVIR 205          
BLAST of BQ623623 vs. ExPASy Swiss-Prot
Match: FUCO3_ARATH (Alpha-L-fucosidase 3 OS=Arabidopsis thaliana GN=FXG1 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 7.334e-13
Identity = 42/108 (38.89%), Postives = 58/108 (53.70%), Query Frame = 2
Query:    2 YRHGANYATLASTVLLPNTSLFVTGISPFSLAIQLNQMKEFKARVDEFHSSCTSGSTKLPSPDIFGKSLYTFYIGQNDFTSN-LAAIGIGGVKQFLPQVVSQIAGTVK 322
            + HGAN+AT  S +   N++L  +G SPFSL +Q  Q   F  R     S      T LP  D F K+LYTF IGQND T+   A   +  V+  +P+++SQ    +K
Sbjct:   97 FSHGANFATAGSPIRALNSTLRQSGFSPFSLDVQFVQFYNFHNRSQTVRSRGGVYKTMLPESDSFSKALYTFDIGQNDLTAGYFANKTVEQVETEVPEIISQFMNAIK 204          
BLAST of BQ623623 vs. ExPASy Swiss-Prot
Match: EST_HEVBR (Esterase OS=Hevea brasiliensis PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.024e-11
Identity = 39/117 (33.33%), Postives = 61/117 (52.14%), Query Frame = 2
Query:    2 YRHGANYATLASTVLLPNTSLFVTG-ISPFSLAIQLNQMKEFKARVDEFHSSCTSGSTKLPSPDIFGKSLYTFYIGQNDFTSNLAAIGIGGVKQFLPQVVSQIAGTVKVMALIGPAT 349
            ++HGA++AT  ST+ LP T +   G  SPF L +Q +Q ++F  R      +    +  +P    F K+LYTF IGQND T     + +  V   +P +V+  +  VK +  +G  T
Sbjct:  101 FKHGADFATAGSTIKLPTTIIPAHGGFSPFYLDVQYSQFRQFIPRSQFIRETGGIFAELVPEEYYFEKALYTFDIGQNDLTEGFLNLTVEEVNATVPDLVNSFSANVKKIYDLGART 217          
The following BLAST results are available for this feature:
BLAST of BQ623623 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
GDL61_ARATH3.159e-4072.41GDSL esterase/lipase At4g01130 OS=Arabidopsis thal... [more]
GDL76_ARATH9.256e-1640.37GDSL esterase/lipase At5g14450 OS=Arabidopsis thal... [more]
GDL53_ARATH7.334e-1336.11GDSL esterase/lipase At3g26430 OS=Arabidopsis thal... [more]
FUCO3_ARATH7.334e-1338.89Alpha-L-fucosidase 3 OS=Arabidopsis thaliana GN=FX... [more]
EST_HEVBR4.024e-1133.33Esterase OS=Hevea brasiliensis PE=1 SV=1[more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_00714 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00714 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623623 ID=BQ623623; Name=BQ623623; organism=Citrus sinensis; type=EST; length=495bp
TTACAGGCATGGAGCCAACTATGCTACTTTGGCCTCTACTGTGCTTTTGC
CCAACACTTCCCTGTTTGTTACCGGGATCAGTCCCTTTTCCCTAGCTATT
CAACTCAACCAAATGAAGGAATTCAAGGCTAGAGTTGATGAATTTCACTC
CTCCTGTACAAGTGGTTCAACCAAGCTTCCTTCACCAGATATTTTCGGAA
AATCTCTCTATACATTTTACATTGGTCAGAATGATTTTACTTCCAATTTA
GCAGCAATTGGCATAGGTGGAGTCAAGCAGTTTCTTCCTCAGGTGGTTTC
ACAAATCGCTGGCACAGTCAAGGTGATGGCACTAATTGGGCCGGCCACGC
CATGTCATGGGGCGGAATTCTAAAATCCACCCCCAATTAATTAAATAATT
CCGTGTTTCCTTTCAACGTTAAATTGGTGACATTTGCTTCATCAAATTTA
CGCAGGAGCTGTATGCTTTAGGTGGGCGCACATTTTTGGGGTTGA
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